BP915027 |
Clone id |
YMU001_000065_F06 |
Library |
YMU01 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_F06. |
Accession |
BP915027 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGCCTCTGAAGCGAAGTTTCTCGAGAAGATACAAGTTATTGAGGAGTTTGGCTTGGATTT GAGTACTAAAAATGGTGTCCGTGCTCTGAATCTTTGGTCACGGTACTCTGTCCAGAAACT GCGTTCGAAGCGTGATTTCCTGAAAACATTGGGATTGACACATGAAGAGGCTACATTTAT GGTCCGAAAAATGCCTTGTGTGCTAAGCCAACACGAAGAAAAAGTAAAGAGGAAGTATGA GTTTTACCGGTACACTACGAAGTTAAGTCTGGAGTATATGATGAACTCTTCCGCCTTGTT TACATGCAGCTTGGAAAAGAGAGTGCTGCCTCGATGGGCTATTTTGCAAGATCTAAAGGA GAGAGGGCTGCTTAAGAAGCCTGTGTCTTTTGCAGCAACGGTTGCACTACCAAATAAGCA ATTTGCAAAGAGATTTAAAGTAGATCCAGAGAAATTGTTGTGATGTTTACCTGTTGGGCT TGCATTCATATCAACCCCATTGATTGGTGCTCGTTCAATATTGCATTATTGTGGAAAGGA TCTCTTTATAGTCAAGAGTAACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O63071 |
Definition |
sp|O63071|MATK_PICRU Maturase K OS=Picea rubens |
Align length |
58 |
Score (bit) |
34.7 |
E-value |
0.33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZZ20 |
Definition |
tr|B7ZZ20|B7ZZ20_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
145 |
Score (bit) |
78.6 |
E-value |
2.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915027|Adiantum capillus-veneris mRNA, clone: YMU001_000065_F06. (563 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7ZZ20|B7ZZ20_MAIZE Putative uncharacterized protein OS=Zea m... 79 2e-13 tr|Q67UH6|Q67UH6_ORYSJ Mitochondrial transcription termination f... 78 3e-13 tr|Q67UH0|Q67UH0_ORYSJ Os06g0225200 protein OS=Oryza sativa subs... 78 3e-13 tr|B8B480|B8B480_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A3B9U0|A3B9U0_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A2YAW2|A2YAW2_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|Q67UI0|Q67UI0_ORYSJ Os06g0224400 protein OS=Oryza sativa subs... 76 1e-12 tr|B8B478|B8B478_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|A3B9T8|A3B9T8_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|B6SI40|B6SI40_MAIZE mTERF family protein OS=Zea mays PE=2 SV=1 73 9e-12 tr|A7PL27|A7PL27_VITVI Chromosome chr7 scaffold_20, whole genome... 73 9e-12 tr|Q67UH5|Q67UH5_ORYSJ Mitochondrial transcription termination f... 72 3e-11 tr|A2YAV5|A2YAV5_ORYSI Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|Q67UH7|Q67UH7_ORYSJ Mitochondrial transcription termination f... 71 5e-11 tr|B4FLK2|B4FLK2_MAIZE Putative uncharacterized protein OS=Zea m... 71 5e-11 tr|Q0DDH0|Q0DDH0_ORYSJ Os06g0224500 protein OS=Oryza sativa subs... 70 1e-10 tr|A2X9N0|A2X9N0_ORYSI Putative uncharacterized protein OS=Oryza... 70 1e-10 tr|Q67UH3|Q67UH3_ORYSJ cDNA clone:001-202-H05, full insert seque... 69 1e-10 tr|Q0DDG7|Q0DDG7_ORYSJ Os06g0224900 protein (Fragment) OS=Oryza ... 69 1e-10 tr|A2YAV9|A2YAV9_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|Q6Z8K9|Q6Z8K9_ORYSJ Os02g0749900 protein OS=Oryza sativa subs... 69 2e-10 tr|Q53NA7|Q53NA7_ORYSJ Os11g0246100 protein OS=Oryza sativa subs... 67 5e-10 tr|B8BJW5|B8BJW5_ORYSI Putative uncharacterized protein OS=Oryza... 67 5e-10 tr|A3CA61|A3CA61_ORYSJ Putative uncharacterized protein OS=Oryza... 67 5e-10 tr|Q67UH1|Q67UH1_ORYSJ Mitochondrial transcription termination f... 67 9e-10 tr|Q0DDG8|Q0DDG8_ORYSJ Os06g0224700 protein OS=Oryza sativa subs... 67 9e-10 tr|Q0DDG5|Q0DDG5_ORYSJ Os06g0225100 protein (Fragment) OS=Oryza ... 67 9e-10 tr|B8B482|B8B482_ORYSI Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|B4FH48|B4FH48_MAIZE Putative uncharacterized protein OS=Zea m... 67 9e-10 tr|B8B479|B8B479_ORYSI Putative uncharacterized protein OS=Oryza... 66 1e-09
>tr|B7ZZ20|B7ZZ20_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 371
Score = 78.6 bits (192), Expect = 2e-13 Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 3/145 (2%) Frame = +2
Query: 23 EKIQVIEEFGLDLSTKNGVRALNLWSRYSV--QKLRSKRDFLK-TLGLTHEEATFMVRKM 193 E++ E+ G+ +T G+ LW+ Y V + +K D +K TLG + E T +VRK Sbjct: 206 ERVACAEKLGVPRNT--GMFKSALWAVYCVGPNSIGAKLDVIKATLGCSGAELTLVVRKS 263
Query: 194 PCVLSQHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLL 373 P +L E K+ R +F + L L+Y++ A+ S+++R++PR ++ LK +GL+ Sbjct: 264 PPILRMSEGKLSRALKFLKVDVGLKLQYILLRPAILAFSMQRRLMPRHYFIKILKAKGLV 323
Query: 374 KKPVSFAATVALPNKQFAKRFKVDP 448 K+ V F + L K+FA++F +DP Sbjct: 324 KENVDFYNALCLTEKRFAQKF-IDP 347
>tr|Q67UH6|Q67UH6_ORYSJ Mitochondrial transcription termination factor-like OS=Oryza sativa subsp. japonica GN=P0638H11.35 PE=4 SV=1 Length = 460
Score = 78.2 bits (191), Expect = 3e-13 Identities = 42/133 (31%), Positives = 74/133 (55%) Frame = +2
Query: 38 IEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCVLSQHE 217 +EE GLD S++ R L + S + K ++ LG + ++ ++RK+P L+ E Sbjct: 227 VEELGLDRSSRRFHRGLVAVALVSKETAARKIRLMEELGFSQDDLLVIMRKLPNFLALSE 286
Query: 218 EKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVSFAA 397 +K++R EF + L Y++ L + SLE+R+LPR +L+ L+ +GLL + + + Sbjct: 287 KKIRRAVEFLKRDVGLEGRYIVQRPVLLSYSLERRLLPRHCLLKVLRTKGLLNSELDYYS 346
Query: 398 TVALPNKQFAKRF 436 T AL K+F +F Sbjct: 347 TAALSEKKFVNKF 359
>tr|Q67UH0|Q67UH0_ORYSJ Os06g0225200 protein OS=Oryza sativa subsp. japonica GN=P0638H11.42 PE=4 SV=1 Length = 393
Score = 78.2 bits (191), Expect = 3e-13 Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 3/152 (1%) Frame = +2
Query: 38 IEEFGLDLSTK---NGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCVLS 208 +EE GLD S++ +G+ A+ S+ SV + K ++ LG + +E ++RK P +++ Sbjct: 228 VEELGLDRSSRMFRHGLIAVAFTSKESVAR---KIQVMEELGFSRDELLMIIRKAPQLVA 284
Query: 209 QHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVS 388 EEK+++ EF + L Y+ + LF SLE+R+LPR +L+ L+ +GLL + Sbjct: 285 SSEEKIRQAAEFLKRDVGLEGRYIAHRPVLFLYSLERRLLPRHHLLKVLRMKGLLDCELD 344
Query: 389 FAATVALPNKQFAKRFKVDPEKLL*CLPVGLA 484 + T A+ ++F ++F VDP K C GLA Sbjct: 345 YYNTAAMSERKFVRKF-VDPYK---CHIPGLA 372
>tr|B8B480|B8B480_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22219 PE=4 SV=1 Length = 767
Score = 78.2 bits (191), Expect = 3e-13 Identities = 42/133 (31%), Positives = 74/133 (55%) Frame = +2
Query: 38 IEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCVLSQHE 217 +EE GLD S++ R L + S + K ++ LG + ++ ++RK+P L+ E Sbjct: 227 VEELGLDRSSRRFHRGLVAVALVSKETAARKIRLMEELGFSQDDLLVIMRKLPNFLALSE 286
Query: 218 EKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVSFAA 397 +K++R EF + L Y++ L + SLE+R+LPR +L+ L+ +GLL + + + Sbjct: 287 KKIRRAVEFLKRDVGLEGRYIVQRPVLLSYSLERRLLPRHCLLKVLRTKGLLNSELDYYS 346
Query: 398 TVALPNKQFAKRF 436 T AL K+F +F Sbjct: 347 TAALSEKKFVNKF 359
Score = 68.6 bits (166), Expect = 2e-10 Identities = 40/141 (28%), Positives = 74/141 (52%) Frame = +2
Query: 14 KFLEKIQVIEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKM 193 K + + +EE G+ ++ R L + S + + +K L LG + ++ + + RKM Sbjct: 594 KLRDAVARVEELGMVRGSRVFHRGLVAVAFLSKEAVAAKTRLLVELGFSQDDVSVIFRKM 653
Query: 194 PCVLSQHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLL 373 P L+ E++++R F + L Y+ L SLE+R+LPR+ +L+ L+ +GLL Sbjct: 654 PSFLTASEKRIRRAVGFLKGDVGLEERYIARRPVLLLYSLERRLLPRYYLLKVLRTKGLL 713
Query: 374 KKPVSFAATVALPNKQFAKRF 436 + + + AL K+F +RF Sbjct: 714 DCKLCYYSIAALGEKKFIERF 734
>tr|A3B9U0|A3B9U0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019812 PE=4 SV=1 Length = 406
Score = 78.2 bits (191), Expect = 3e-13 Identities = 42/133 (31%), Positives = 74/133 (55%) Frame = +2
Query: 38 IEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCVLSQHE 217 +EE GLD S++ R L + S + K ++ LG + ++ ++RK+P L+ E Sbjct: 227 VEELGLDRSSRRFHRGLVAVALVSKETAARKIRLMEELGFSQDDLLVIMRKLPNFLALSE 286
Query: 218 EKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVSFAA 397 +K++R EF + L Y++ L + SLE+R+LPR +L+ L+ +GLL + + + Sbjct: 287 KKIRRAVEFLKRDVGLEGRYIVQRPVLLSYSLERRLLPRHCLLKVLRTKGLLNSELDYYS 346
Query: 398 TVALPNKQFAKRF 436 T AL K+F +F Sbjct: 347 TAALSEKKFVNKF 359
>tr|A2YAW2|A2YAW2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22226 PE=4 SV=1 Length = 393
Score = 78.2 bits (191), Expect = 3e-13 Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 3/152 (1%) Frame = +2
Query: 38 IEEFGLDLSTK---NGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCVLS 208 +EE GLD S++ +G+ A+ S+ SV + K ++ LG + +E ++RK P +++ Sbjct: 228 VEELGLDRSSRMFRHGLIAVAFTSKESVAR---KIQVMEELGFSRDELLMIIRKAPQLVA 284
Query: 209 QHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVS 388 EEK+++ EF + L Y+ + LF SLE+R+LPR +L+ L+ +GLL + Sbjct: 285 SSEEKIRQAAEFLKRDVGLEGRYIAHRPVLFLYSLERRLLPRHHLLKVLRMKGLLDCELD 344
Query: 389 FAATVALPNKQFAKRFKVDPEKLL*CLPVGLA 484 + T A+ ++F ++F VDP K C GLA Sbjct: 345 YYNTAAMSERKFVRKF-VDPYK---CHIPGLA 372
>tr|Q67UI0|Q67UI0_ORYSJ Os06g0224400 protein OS=Oryza sativa subsp. japonica GN=P0638H11.30 PE=2 SV=1 Length = 392
Score = 76.3 bits (186), Expect = 1e-12 Identities = 42/138 (30%), Positives = 70/138 (50%) Frame = +2
Query: 23 EKIQVIEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCV 202 E + + EFG T+ A+ ++ +KL K +F K LG + ++ + VR MP + Sbjct: 218 EAVVLANEFGAKQGTRVFTNAVMIFGILGQEKLAKKLEFFKKLGWSQDDLSLAVRSMPHI 277
Query: 203 LSQHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKP 382 L+ EE+++R +F L + Y+ AL S+E+R+LPR ++ LK GLLK Sbjct: 278 LAMKEERMRRGMKFLTEDVGLEIPYIARRPALTMYSIERRLLPRHCLINVLKGNGLLKAN 337
Query: 383 VSFAATVALPNKQFAKRF 436 F + N F ++F Sbjct: 338 YDFYNISVISNDDFMEKF 355
>tr|B8B478|B8B478_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22217 PE=4 SV=1 Length = 392
Score = 76.3 bits (186), Expect = 1e-12 Identities = 42/138 (30%), Positives = 70/138 (50%) Frame = +2
Query: 23 EKIQVIEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCV 202 E + + EFG T+ A+ ++ +KL K +F K LG + ++ + VR MP + Sbjct: 218 EAVVLANEFGAKQGTRVFTNAVMIFGILGQEKLAKKLEFFKKLGWSQDDLSLAVRSMPHI 277
Query: 203 LSQHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKP 382 L+ EE+++R +F L + Y+ AL S+E+R+LPR ++ LK GLLK Sbjct: 278 LAMKEERMRRGMKFLTEDVGLEIPYIARRPALTMYSIERRLLPRHCLINVLKGNGLLKAN 337
Query: 383 VSFAATVALPNKQFAKRF 436 F + N F ++F Sbjct: 338 YDFYNISVISNDDFMEKF 355
>tr|A3B9T8|A3B9T8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019810 PE=4 SV=1 Length = 451
Score = 76.3 bits (186), Expect = 1e-12 Identities = 42/138 (30%), Positives = 70/138 (50%) Frame = +2
Query: 23 EKIQVIEEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLKTLGLTHEEATFMVRKMPCV 202 E + + EFG T+ A+ ++ +KL K +F K LG + ++ + VR MP + Sbjct: 218 EAVVLANEFGAKQGTRVFTNAVMIFGILGQEKLAKKLEFFKKLGWSQDDLSLAVRSMPHI 277
Query: 203 LSQHEEKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKP 382 L+ EE+++R +F L + Y+ AL S+E+R+LPR ++ LK GLLK Sbjct: 278 LAMKEERMRRGMKFLTEDVGLEIPYIARRPALTMYSIERRLLPRHCLINVLKGNGLLKAN 337
Query: 383 VSFAATVALPNKQFAKRF 436 F + N F ++F Sbjct: 338 YDFYNISVISNDDFMEKF 355
>tr|B6SI40|B6SI40_MAIZE mTERF family protein OS=Zea mays PE=2 SV=1 Length = 400
Score = 73.2 bits (178), Expect = 9e-12 Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Frame = +2
Query: 41 EEFGLDLSTKNGVRALNLWSRYSVQKLRSKRDFLK-TLGLTHEEATFMVRKMPCVLSQHE 217 EE G+ ++ ++A+ + + + +K+ +K DF K TLG + E + V KMP +L+ E Sbjct: 241 EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSE 300
Query: 218 EKVKRKYEFYRYTTKLSLEYMMNSSALFTCSLEKRVLPRWAILQDLKERGLLKKPVSFAA 397 + RK EF + +Y+M L SLEKR++PR+ +++ L+ +GLL +S ++ Sbjct: 301 ATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSS 360
Query: 398 TVALPNKQFAKRFKVDPEKLL*CLPVGLA 484 +L + F +F VD K C+P GLA Sbjct: 361 LASLAEETFKSKF-VDCHK--DCVP-GLA 385
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