BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915028|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_F07.
         (294 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=C...    30   3.8  
sp|P54226|G3P_STRAE Glyceraldehyde-3-phosphate dehydrogenase OS=...    30   4.8  
sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1...    29   6.3  
sp|Q74JM3|SCPA_LACJO Segregation and condensation protein A OS=L...    29   8.2  

>sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=COB
           PE=2 SV=1
          Length = 456

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +1

Query: 157 KCQSGACKNADIPHMASIVA*GRPQGGT---LLSCVVHL 264
           + +SGAC + D PH+AS+V+    +G     L+ C  H+
Sbjct: 259 RTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHM 297


>sp|P54226|G3P_STRAE Glyceraldehyde-3-phosphate dehydrogenase
           OS=Streptomyces arenae GN=gap PE=3 SV=1
          Length = 333

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +2

Query: 44  VPTI*DRYDTTALRGKTPRGKASGLSRTPRK-----TVDEAYKNAKAGPAK 181
           +P +  R D  ALR   P G  + L+ T R+      V EAY  A +GP K
Sbjct: 221 LPELAGRLDAFALRVPVPTGSVTDLTVTTRRGTSVEEVKEAYAAAASGPYK 271


>sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1731
            homolog OS=Rattus norvegicus PE=2 SV=2
          Length = 2395

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 100  PWRFSSQGSSIIAISDGGHSPNGGAVHGEH 11
            PW  SSQGSS       G  P   AVH EH
Sbjct: 1677 PWGDSSQGSS------SGDQPGAAAVHAEH 1700


>sp|Q74JM3|SCPA_LACJO Segregation and condensation protein A
           OS=Lactobacillus johnsonii GN=scpA PE=3 SV=1
          Length = 247

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 33  PLGECPPSEIAMILLP*EEKRQGEKP-LGCLELHEKL*MKPTKMPKRGLQKRRYTPY 200
           PLGE    E+A       E+ +  KP +G +E+HE    + T   K  LQK+R T +
Sbjct: 141 PLGEITSDELANTFKVVLERFKLRKPQVGKIEVHETSIEEMTSFLKNRLQKKRSTSF 197

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915028|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_F07.
         (294 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0Z9I3|A0Z9I3_9GAMM Exonuclease OS=marine gamma proteobacteri...    33   9.2  

>tr|A0Z9I3|A0Z9I3_9GAMM Exonuclease OS=marine gamma proteobacterium
           HTCC2080 GN=MGP2080_07449 PE=4 SV=1
          Length = 483

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = -1

Query: 213 HNTSHMGYICVFAGPALAFL*ASSTVFRGVLDSPEA-FPLGVF--PLKAVVS*RSQMV 49
           H T+  G IC   G A AFL  SS   R +L +P+A FP GV   PLK +   R+ +V
Sbjct: 248 HPTNKNGVICADLGEAPAFLDQSSEDVRQLLFTPKADFPAGVQRPPLKMIQINRAPVV 305