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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915029
Clone id YMU001_000065_F08
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTGTTGATGATCGGTTGGAAGATGCTAGTGTACTTATATCGGATGTAGGTTGTGCTTTG
GAGCTTTTTCCTCTTGTGCCAGCCTTGCGGAATCAAGAGCGTGATCCAAATGCAGTGGAG
GAAGGGCGGGGCCATGTAATCAGGGCTGTTCCTCGTCGAGCAATAGCTGCATCAGAGTCA
GCTGCTGGAATCTTGCTTTCTCTTCAACGAGAGAAACAAAATAGGCCACGAATGAGGTTG
TGTTAATGCTTTTTACCTGGGGCCATACTTGCTGCATCCTCCAGCTGGCAGTGTTATTGA
TGCTGTCTTCTCATGGGAGTGTTGGCCTGGGAATCCAGTTTCTATACGAGAGATTCTTCA
GTGTGTCAATTGGTGATTTCCATGATGAGAGTGTCTAACCAATGGAGGACTTCGTACATA
AGTCAGCCATGATGAGAGTGTCTAACCAATGGAGGACTTCGTACATAAGTCAGCCTTAGG
AAACAAGGAGTTATTTCTTCCTGTTCCTGCCAGCCTTAGGGACAATAG
■■Homology search results ■■ -
sp_hit_id Q59P11
Definition sp|Q59P11|HSV2_CANAL SVP1-like protein 2 OS=Candida albicans
Align length 58
Score (bit) 32.3
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915029|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_F08.
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q59P11|HSV2_CANAL SVP1-like protein 2 OS=Candida albicans GN=...    32   1.4  
sp|P72958|Y640_SYNY3 Uncharacterized transporter sll0640 OS=Syne...    31   3.2  
sp|Q6P5E6|GGA2_MOUSE ADP-ribosylation factor-binding protein GGA...    30   5.4  
sp|P52059|YPI3_VIBAL Uncharacterized protein in proC 3'region OS...    30   7.1  
sp|Q9UJY4|GGA2_HUMAN ADP-ribosylation factor-binding protein GGA...    30   9.2  

>sp|Q59P11|HSV2_CANAL SVP1-like protein 2 OS=Candida albicans
           GN=HSV2 PE=3 SV=1
          Length = 595

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 176 SDAAIARRGTALITWPRPSSTAFGSRS*FRKAGTRGKSSKAQPTSDISTLASSNRSST 3
           S  ++   GT L T+P PSST   S S      T   ++ A PT+  +T  ++  ++T
Sbjct: 279 SSTSLKENGTNLTTYPSPSSTTSASASVATITNTPEAATTANPTTATTTATTTATTTT 336


>sp|P72958|Y640_SYNY3 Uncharacterized transporter sll0640
           OS=Synechocystis sp. (strain PCC 6803) GN=sll0640 PE=3
           SV=1
          Length = 612

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -3

Query: 268 VWPQVKSINTTSFVAYFVSLVEEKARFQQLTLMQLLL 158
           V P    +N T+ VA F+ ++EE AR +Q+++ +LL+
Sbjct: 110 VGPSSAFLNNTAIVAIFLPIIEEWARQRQISVSKLLI 146


>sp|Q6P5E6|GGA2_MOUSE ADP-ribosylation factor-binding protein GGA2
           OS=Mus musculus GN=Gga2 PE=2 SV=1
          Length = 603

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 254 YLGPYLLHPPAGSVIDAVFSWECWPGNPVSIREILQ 361
           YLG +      G VI+ +FSW  W    + IR+  Q
Sbjct: 121 YLGAWATEKVKGRVIEILFSWTVWFPEDIKIRDAYQ 156


>sp|P52059|YPI3_VIBAL Uncharacterized protein in proC 3'region
           OS=Vibrio alginolyticus PE=3 SV=1
          Length = 185

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 225 ATNEVVLMLFTWGHTCCILQLAVLLMLSSHGSVGLGIQFLY 347
           +   + L    + +  C+L+  VL++++S+GSV     FL+
Sbjct: 57  SVGNIDLATVLFAYVLCVLKFVVLILIASNGSVSFSADFLF 97


>sp|Q9UJY4|GGA2_HUMAN ADP-ribosylation factor-binding protein GGA2
           OS=Homo sapiens GN=GGA2 PE=1 SV=3
          Length = 613

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 254 YLGPYLLHPPAGSVIDAVFSWECWPGNPVSIREILQ 361
           YLG +      G VI+ +FSW  W    + IR+  Q
Sbjct: 118 YLGSWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQ 153
tr_hit_id Q4P695
Definition tr|Q4P695|Q4P695_USTMA Putative uncharacterized protein OS=Ustilago maydis
Align length 65
Score (bit) 34.3
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915029|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_F08.
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4P695|Q4P695_USTMA Putative uncharacterized protein OS=Ustil...    34   4.0  
tr|B1VR77|B1VR77_STRGG Putative membrane protein OS=Streptomyces...    26   7.7  
tr|Q3A6B3|Q3A6B3_PELCD 6Fe-6S prismane cluster-containing protei...    33   8.8  
tr|Q5KP88|Q5KP88_CRYNE Conjugation with cellular fusion-related ...    33   8.8  

>tr|Q4P695|Q4P695_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM04368.1 PE=4 SV=1
          Length = 716

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -2

Query: 197 SKIPAADSDAAIARRGTALITWPRPSSTAFGSRS*FRKAGTRGKSSKAQPTSDISTLASS 18
           S + A  + ++  R  T   T P+PS+T+  SRS      T  K S +  TS  ST +++
Sbjct: 216 STLNAVRTASSTRRSTTTTSTTPKPSTTSTTSRS-----STTSKPSTSSTTSRSSTASTT 270

Query: 17  NRSST 3
           +RSST
Sbjct: 271 SRSST 275


>tr|B1VR77|B1VR77_STRGG Putative membrane protein OS=Streptomyces
           griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
           GN=SGR_3899 PE=4 SV=1
          Length = 516

 Score = 26.2 bits (56), Expect(2) = 7.7
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -2

Query: 512 WQEQEEITPCFLRLTYVRSPPLVRHSHHG 426
           WQ +E   P      ++   P   H HHG
Sbjct: 414 WQRREFAAPALTHAAHLTGRPGAHHGHHG 442



 Score = 25.8 bits (55), Expect(2) = 7.7
 Identities = 16/48 (33%), Positives = 17/48 (35%)
 Frame = -1

Query: 405 PLVRHSHHGNHQLTH*RISRIETGFPGQHSHEKTASITLPAGGCSKYG 262
           P   H HHG H            G  GQH H + A    P G    YG
Sbjct: 434 PGAHHGHHGRH------------GRHGQHGHPRPA----PHGSAYGYG 465


>tr|Q3A6B3|Q3A6B3_PELCD 6Fe-6S prismane cluster-containing protein
           OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
           GN=Pcar_0837 PE=4 SV=1
          Length = 550

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +2

Query: 272 LHPPAGSVIDAVFSWEC--WPG 331
           +  PAGS ID VF+W+C  WPG
Sbjct: 321 IQKPAGSYIDRVFTWDCVSWPG 342


>tr|Q5KP88|Q5KP88_CRYNE Conjugation with cellular fusion-related
           protein, putative (Putative uncharacterized protein)
           OS=Cryptococcus neoformans GN=CNA03800 PE=4 SV=1
          Length = 465

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
 Frame = -2

Query: 203 RESKIPAADSDAAIARRGTALITWPR----PSSTAFG--------SRS*FRKAGTRGKSS 60
           + + +P+A++DAA ARR  AL   P      +ST  G        + +  R+AGTR +  
Sbjct: 29  KSAAVPSANADAATARRLPALPNGPHSFRTDTSTPAGELDSAYEQTATRRRRAGTRSERP 88

Query: 59  KAQPTSDISTLASSNRSS 6
             QP +D     +S+R++
Sbjct: 89  STQPNTDSKGQRTSSRTA 106