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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915044
Clone id YMU001_000065_H02
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCCTGTTCAATGTGCTGTTAGAGCTAACAGTGTCCAACGGAAGCATAACATACACAGGAA
CTCCTCCATCTGTCCCTCTACTTGTTGGTGTGTCGATGTACACATATTCCTTCTCTTTGG
GAGCTTGATTCGAGCTTTCATGGAAGTCAAAGAGCTTGTCACCTGTGAGATTTGAGGGCC
CTGAACTCGGCCATATGATTGCAGAAGGTTGCGAAGTCGACTTGTCAGAGGGCTTCCTCC
ACCATTCATCAGAAGAGATGAATGTCGGGGGAGGAGAAGTAAAAGGAGCAGCTGAGTCTG
GGTTAGTGTTAGGGTTGACGTTATGAGTGGAAGTATTGTGAAAGCCATGGACGTTCTTGC
GAGAACCTGGCTTTTCATGGAGATCTGACCAGAAGCCTCTAATGGATTCGGGGGAGCTTC
CATAGAGAGAGCCCGAGATAGTAGAAGAAGGAAATGCCATGGCTACGTAACGGAAGCTCA
GACAAATGAAGGGCTAAAAACGATTAACTGAGAAGCTTCACCTGTACAATGAGGA
■■Homology search results ■■ -
sp_hit_id Q8KFL5
Definition sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
Align length 41
Score (bit) 37.0
E-value 0.06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915044|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_H02.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepi...    37   0.060
sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegyp...    33   0.67 
sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens G...    30   5.7  
sp|Q8FAA2|IRAD_ECOL6 Anti-adapter protein iraD OS=Escherichia co...    30   7.4  

>sp|Q8KFL5|SYI_CHLTE Isoleucyl-tRNA synthetase OS=Chlorobium tepidum
           GN=ileS PE=3 SV=1
          Length = 1084

 Score = 37.0 bits (84), Expect = 0.060
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 174 EGPELGHMIAEGCEVDLSEGFLHHSSEEMNVGGGEVKGAAE 296
           +GP+ G + A G   +L EGF+    EEMN+G    KG  E
Sbjct: 481 DGPDSGKLFAVGSVAELREGFIEIDGEEMNLGDALDKGLVE 521


>sp|P42660|VCP_AEDAE Vitellogenic carboxypeptidase OS=Aedes aegypti
           GN=VCP PE=1 SV=3
          Length = 471

 Score = 33.5 bits (75), Expect = 0.67
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
 Frame = -1

Query: 244 WWRKPSDKSTSQPSAIIWPSSGP--SNLTG--DKLFDFHESSNQAPKEKEY--------V 101
           +W  P+  +  Q   ++W   GP  S+L G  ++   FH   N++ K++EY        +
Sbjct: 93  FWYVPAKNNREQAPILVWLQGGPGASSLFGMFEENGPFHIHRNKSVKQREYSWHQNHHMI 152

Query: 100 YIDTPTSRG 74
           YID P   G
Sbjct: 153 YIDNPVGTG 161


>sp|O60503|ADCY9_HUMAN Adenylate cyclase type 9 OS=Homo sapiens
           GN=ADCY9 PE=1 SV=4
          Length = 1353

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 187 SSGPSNLTGDKLFDFHESSNQAPKEKEYVYIDTPTSRGTDGGVP 56
           SSG SN    K+     SSN  PK  +Y    + +S G  GGVP
Sbjct: 21  SSGDSNSVRVKINPKQLSSNSHPKHCKYSISSSCSSSGDSGGVP 64


>sp|Q8FAA2|IRAD_ECOL6 Anti-adapter protein iraD OS=Escherichia coli
           O6 GN=iraD PE=3 SV=2
          Length = 127

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 334 YCESHGRSCENLAFHGD--LTRSL*WIRGSFHRESPR 438
           YC     S E + +H D  LT  L W +GS+HR  P+
Sbjct: 91  YCHELAISLEMMLYHDDEPLTFDLVWQKGSWHRTMPQ 127
tr_hit_id A9THN6
Definition tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp. patens
Align length 57
Score (bit) 59.7
E-value 9.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915044|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_H02.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens sub...    60   9e-08
tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens sub...    54   5e-06
tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens sub...    52   2e-05
tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome...    38   0.29 
tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|Q9LIR6|Q9LIR6_ARATH Beta-amylase OS=Arabidopsis thaliana GN=A...    36   1.4  
tr|A9NVE4|A9NVE4_PICSI Beta-amylase OS=Picea sitchensis PE=2 SV=1      36   1.4  
tr|A7NXM5|A7NXM5_VITVI Chromosome chr5 scaffold_2, whole genome ...    36   1.4  
tr|A5AJ10|A5AJ10_VITVI Putative uncharacterized protein OS=Vitis...    36   1.4  
tr|Q8W2D8|Q8W2D8_BRANA Beta-amylase OS=Brassica napus GN=bmy PE=...    35   1.9  
tr|B3QQB5|B3QQB5_CHLP8 Isoleucyl-tRNA synthetase OS=Chlorobaculu...    34   4.1  
tr|A0AW49|A0AW49_ARTS2 Heavy metal translocating P-type ATPase O...    34   4.1  
tr|A7NXN0|A7NXN0_VITVI Beta-amylase OS=Vitis vinifera GN=GSVIVT0...    34   4.2  
tr|B6L2F6|B6L2F6_BRAFL Putative uncharacterized protein (Fragmen...    33   7.2  
tr|B8NPQ7|B8NPQ7_ASPFL Putative uncharacterized protein OS=Asper...    33   9.2  
tr|Q9SMW0|Q9SMW0_ARATH Beta-amylase enzyme (Putative beta-amylas...    33   9.3  
tr|Q941A5|Q941A5_ARATH AT4g17090/dl4575c OS=Arabidopsis thaliana...    33   9.3  
tr|Q5F305|Q5F305_SOYBN Beta-amylase OS=Glycine max GN=bmy2 PE=2 ...    33   9.3  
tr|O23553|O23553_ARATH Putative beta-amylase OS=Arabidopsis thal...    33   9.3  
tr|A9PGR1|A9PGR1_POPTR Putative uncharacterized protein OS=Popul...    33   9.3  

>tr|A9THN6|A9THN6_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_222395 PE=3 SV=1
          Length = 507

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
 Frame = -1

Query: 160 DKLFDFHES----SNQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
           D +F  H+S     N A + KE+ + +TPTSRG  GGVPV+VMLPLD+V+ N+TL R
Sbjct: 2   DTMFPEHKSLLDWDNTADEWKEHAFHETPTSRGVHGGVPVFVMLPLDSVNINNTLKR 58


>tr|A9SR20|A9SR20_PHYPA Beta-amylase OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_187470 PE=3 SV=1
          Length = 505

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = -1

Query: 130 NQAPKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
           N + K KE+ + +T TSRG  G VPV+VMLPLD+V+ N+TLNR
Sbjct: 13  NTSDKWKEHAFHETATSRGVHGRVPVFVMLPLDSVNMNNTLNR 55


>tr|A9RQY6|A9RQY6_PHYPA Beta-amylase OS=Physcomitrella patens
          subsp. patens GN=PHYPADRAFT_118142 PE=3 SV=1
          Length = 483

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 94 DTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
          +T TSRG  GGVPV+VMLPLDTVS N+TLNR
Sbjct: 3  ETATSRGVRGGVPVFVMLPLDTVSMNNTLNR 33


>tr|A7PCH3|A7PCH3_VITVI Chromosome chr2 scaffold_11, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015861001
           PE=3 SV=1
          Length = 247

 Score = 38.1 bits (87), Expect = 0.29
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 142 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVSSNSTLNR 2
           HE++  +   K  V    PT    +G  VPV+VMLPLDTVS    LN+
Sbjct: 53  HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNK 100


>tr|A5AGI9|A5AGI9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032500 PE=3 SV=1
          Length = 543

 Score = 38.1 bits (87), Expect = 0.29
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 142 HESSNQAPKEKEYVYIDTPTSRGTDGG-VPVYVMLPLDTVSSNSTLNR 2
           HE++  +   K  V    PT    +G  VPV+VMLPLDTVS    LN+
Sbjct: 53  HENAMVSEGRKNQVLHGLPTPHNKNGSRVPVFVMLPLDTVSFGGNLNK 100


>tr|Q9LIR6|Q9LIR6_ARATH Beta-amylase OS=Arabidopsis thaliana
           GN=At3g23920 PE=2 SV=1
          Length = 575

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = -1

Query: 67  GGVPVYVMLPLDTVSSNSTLNR 2
           GGVPV+VM+PLD+V+  +T+NR
Sbjct: 104 GGVPVFVMMPLDSVTMGNTVNR 125


>tr|A9NVE4|A9NVE4_PICSI Beta-amylase OS=Picea sitchensis PE=2 SV=1
          Length = 492

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -1

Query: 112 KEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
           ++Y  I    S    GGVPV+V LPLD+V+S  T+NR
Sbjct: 16  EQYGRILPSISTRDHGGVPVFVKLPLDSVTSKHTVNR 52


>tr|A7NXM5|A7NXM5_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020394001
           PE=3 SV=1
          Length = 573

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -1

Query: 124 APKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
           AP E+EY    T   +    GVPVYVM+PLD+V+  + +NR
Sbjct: 90  APAEREYRVGGT---KAKGKGVPVYVMMPLDSVTMGNGVNR 127


>tr|A5AJ10|A5AJ10_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002992 PE=3 SV=1
          Length = 570

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -1

Query: 124 APKEKEYVYIDTPTSRGTDGGVPVYVMLPLDTVSSNSTLNR 2
           AP E+EY    T   +    GVPVYVM+PLD+V+  + +NR
Sbjct: 87  APAEREYRVGGT---KAKGKGVPVYVMMPLDSVTMGNGVNR 124


>tr|Q8W2D8|Q8W2D8_BRANA Beta-amylase OS=Brassica napus GN=bmy PE=2
           SV=1
          Length = 569

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = -1

Query: 67  GGVPVYVMLPLDTVSSNSTLNR 2
           GGVPV+VM+PLD+V+  +T+NR
Sbjct: 99  GGVPVFVMIPLDSVTIGNTVNR 120