BP915046 |
Clone id |
YMU001_000065_H04 |
Library |
YMU01 |
Length |
430 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_H04. |
Accession |
BP915046 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL128Contig1 |
Sequence |
CGGCATCAGAGGATCCCTTAAGCATCAGTGGATGCAACACATCTAGCAGCTCCTCGCTTC AGGAGAGCCTACAGCGCATGGCTACCAAGATCACTCAAAACCCTACCCTTCGCAATGCTG CTTTCTTTGCGATGAATGCCCTCTGGGCAGTGCCAGCCATAGCTGCAGAAGTCGCAGCAG AGGCAGAAGAGAAGGGAAAGATTGTCGATTTTAATCTCACCCTCCCCATTATCGCGGCAG AGTTCCTGTTGCTCATGGTGACTTTGGACAACATATGGTTTAAGCCTGTGGCCAATGTTA TGGATGACAGAGATGAAGCCATCAGGCAGAAGCTTATGAGTGTGCGCGACAATTCCGACG AGATCAAGAAGCTGCAAGAGCAGGCTGAGGCGATCCTCAAGGCCGCACGTGCAGAGACCA CGGCGGAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31853 |
Definition |
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea |
Align length |
78 |
Score (bit) |
90.9 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915046|Adiantum capillus-veneris mRNA, clone: YMU001_000065_H04. (430 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spi... 91 2e-18 sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Por... 60 5e-09 sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui... 59 1e-08 sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Por... 58 1e-08 sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. ... 55 9e-08 sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. ... 54 3e-07 sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cya... 54 3e-07 sp|Q00823|ATPX_ODOSI ATP synthase B' chain, chloroplastic OS=Odo... 54 3e-07 sp|Q40608|ATPX_OCHNE ATP synthase B' chain, chloroplastic OS=Och... 53 4e-07 sp|P35012|ATPX_GALSU ATP synthase B' chain, chloroplastic OS=Gal... 52 1e-06 sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic OS=Ant... 52 1e-06 sp|P12410|ATPX_ANASP ATP synthase B' chain OS=Anabaena sp. (stra... 50 4e-06 sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. ... 47 2e-05 sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanopho... 45 9e-05 sp|P20601|ATPF_BACME ATP synthase B chain OS=Bacillus megaterium... 41 0.002 sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific O... 40 0.005 sp|P09221|ATPF_BACP3 ATP synthase B chain OS=Bacillus PS3 GN=atp... 38 0.015 sp|P41014|ATPF_BACCA ATP synthase B chain OS=Bacillus caldotenax... 36 0.074 sp|Q49Z54|ATPF_STAS1 ATP synthase B chain OS=Staphylococcus sapr... 33 0.48 sp|Q7A0C4|ATPF_STAAW ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q6G7K3|ATPF_STAAS ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q6GEW8|ATPF_STAAR ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q7A4E7|ATPF_STAAN ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q99SF1|ATPF_STAAM ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q5HE93|ATPF_STAAC ATP synthase B chain OS=Staphylococcus aure... 31 1.8 sp|Q6C603|RL7_YARLI 60S ribosomal protein L7 OS=Yarrowia lipolyt... 30 4.1 sp|Q28644|SCN9A_RABIT Sodium channel protein type 9 subunit alph... 29 9.1 sp|Q62205|SCN9A_MOUSE Sodium channel protein type 9 subunit alph... 29 9.1 sp|Q15858|SCN9A_HUMAN Sodium channel protein type 9 subunit alph... 29 9.1 sp|Q16D38|IF2_ROSDO Translation initiation factor IF-2 OS=Roseob... 29 9.1
>sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea GN=ATPG PE=1 SV=2 Length = 222
Score = 90.9 bits (224), Expect = 2e-18 Identities = 42/78 (53%), Positives = 59/78 (75%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 K + DFNLTLPII AEFL LM LD I++ P+ + MD RD +I+++L V+D S E+K+ Sbjct: 80 KASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQ 139
Query: 372 LQEQAEAILKAARAETTA 425 L+EQA A+++AARAE +A Sbjct: 140 LEEQANAVMRAARAEISA 157
>sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Porphyra purpurea GN=atpG PE=3 SV=1 Length = 158
Score = 59.7 bits (143), Expect = 5e-09 Identities = 30/79 (37%), Positives = 49/79 (62%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 +G + DFN TLP++A +FL+LM+ L+ I++KPV ++D+RDE IR L + + + Sbjct: 13 EGGLFDFNGTLPLMALQFLILMLLLNTIFYKPVTKILDERDEYIRTTLTTASSMLVKADE 72
Query: 372 LQEQAEAILKAARAETTAE 428 L + E L AR + A+ Sbjct: 73 LAAKYEEDLSKARRDAQAK 91
>sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Guillardia theta GN=atpG PE=3 SV=1 Length = 163
Score = 58.5 bits (140), Expect = 1e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 +G + DFN TLP++A + LL MV L+ +++ PVA V+D+R+E IR+ L D + + Sbjct: 18 EGGLFDFNATLPLMAVQILLFMVILNAVFYNPVAKVLDEREEYIRKNLTQASDILAKAEA 77
Query: 372 LQEQAEAILKAARAE 416 + +Q E L R E Sbjct: 78 ITKQYEKDLAQERRE 92
>sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Porphyra yezoensis GN=atpG PE=3 SV=1 Length = 156
Score = 58.2 bits (139), Expect = 1e-08 Identities = 31/73 (42%), Positives = 45/73 (61%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 +G + DFN TLP++A +FL LMV L+ I++KPV V+D+RDE IR L + + + Sbjct: 13 EGGLFDFNGTLPLMALQFLTLMVLLNTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADE 72
Query: 372 LQEQAEAILKAAR 410 L + E L AR Sbjct: 73 LAAKYEEDLSEAR 85
>sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1 Length = 159
Score = 55.5 bits (132), Expect = 9e-08 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%) Frame = +3
Query: 207 DFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKKLQEQ- 383 DF+ TLP++A +FL+L V L+ + +KP+ +D+RDE IR L ++ + +L Q Sbjct: 24 DFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELANQY 83
Query: 384 ----------AEAILKAARAE 416 A+AI++ ARAE Sbjct: 84 EQELAYTRREAQAIIEEARAE 104
>sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=1 Length = 158
Score = 53.9 bits (128), Expect = 3e-07 Identities = 26/78 (33%), Positives = 45/78 (57%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 +G + D + TLP++A + L+L+ L+ +++KP V+DDRD+ +R + E+K Sbjct: 16 EGGLFDLDATLPLMAVQILVLVFLLNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKA 75
Query: 372 LQEQAEAILKAARAETTA 425 L Q E L A R ++ A Sbjct: 76 LTAQYEQELAATRKQSQA 93
>sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cyanidium caldarium GN=atpG PE=3 SV=1 Length = 157
Score = 53.9 bits (128), Expect = 3e-07 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Frame = +3
Query: 195 GKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK- 371 G + DF+ TLP++A++FLL+M+ LD ++KP+ V+ DR+ I + L S S++ K+ Sbjct: 15 GGLFDFDATLPLMASQFLLIMLILDITFYKPINKVLKDRENYILKTLESATQISEKTKET 74
Query: 372 LQEQAEAILKAAR 410 L E ILK+ + Sbjct: 75 LARYEEVILKSKK 87
>sp|Q00823|ATPX_ODOSI ATP synthase B' chain, chloroplastic OS=Odontella sinensis GN=atpG PE=3 SV=1 Length = 156
Score = 53.5 bits (127), Expect = 3e-07 Identities = 28/78 (35%), Positives = 42/78 (53%) Frame = +3
Query: 195 GKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKKL 374 G + D N TLP++A +FLLLMV L+ I + P+ ++++R E I KL + + +L Sbjct: 17 GGLFDINATLPLVAIQFLLLMVLLNVILYSPLLTIIEERKEYILNKLAKASEILSQANEL 76
Query: 375 QEQAEAILKAARAETTAE 428 Q E L R E E Sbjct: 77 TAQYEQELNTVRKEAQLE 94
>sp|Q40608|ATPX_OCHNE ATP synthase B' chain, chloroplastic OS=Ochrosphaera neapolitana GN=atpG PE=3 SV=1 Length = 163
Score = 53.1 bits (126), Expect = 4e-07 Identities = 26/75 (34%), Positives = 46/75 (61%) Frame = +3
Query: 192 KGKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKK 371 +G + DFN TLP++A +F+LL V L +++KP+ N++++R+ I L + + Sbjct: 18 EGGLFDFNATLPLMALQFILLTVILTFVFYKPIGNLLEEREAYINGNLSDASAKLLQADE 77
Query: 372 LQEQAEAILKAARAE 416 L +Q E LK A+A+ Sbjct: 78 LCKQYEEQLKDAKAD 92
>sp|P35012|ATPX_GALSU ATP synthase B' chain, chloroplastic OS=Galdieria sulphuraria GN=atpG PE=3 SV=1 Length = 157
Score = 52.0 bits (123), Expect = 1e-06 Identities = 28/74 (37%), Positives = 44/74 (59%) Frame = +3
Query: 195 GKIVDFNLTLPIIAAEFLLLMVTLDNIWFKPVANVMDDRDEAIRQKLMSVRDNSDEIKKL 374 G + DF+ TL IA EFLLL L+ I+++P++ V+D R++ IR+ L D+ +L Sbjct: 15 GGLFDFDATLSFIALEFLLLTSVLNLIYYQPISKVIDSREDYIRENLNKASLYLDQANEL 74
Query: 375 QEQAEAILKAARAE 416 ++ E L AR E Sbjct: 75 TKKYELELITARKE 88
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RKV9 |
Definition |
tr|A9RKV9|A9RKV9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
105 |
Score (bit) |
128.0 |
E-value |
2.0e-28 |
Report |
|