BP915048 |
Clone id |
YMU001_000065_H06 |
Library |
YMU01 |
Length |
382 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_H06. |
Accession |
BP915048 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCCCTAGAAAGGAGGGAAAATGAACCCTCAATGATAAAGGAGCTCGAAAGCATTAAGGAG AAGAAAAAACTCTACGTGAAGAGGAAGAGCAGAAGGCACGAACAACCTCTTCATGGGCGG AGCATCTATTGAAAACACAAGAAAAGGTTGATAAAGCTGGAAAGTGGATCGAGGACGCAA AGAAAGGAAAAGATAAGATGCATGAAGCCACATCGACATCCACTATTATCAAAATGACAA TTGAGGAGGAGCAAAAGAGGAAGACTAGAGCCCTTCATGTGCGTGTTACAAGTCTCAAAA ACACTGGAAAAGTAGAAGAAGTGACGACTCTTGAGACGCATGGGCATGTGTGAACCCACA CACACAGGTGCTTGGAGAGTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8WP33 |
Definition |
sp|Q8WP33|PFD6L_MACFA Prefoldin subunit 6-like protein OS=Macaca fascicularis |
Align length |
89 |
Score (bit) |
31.6 |
E-value |
1.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915048|Adiantum capillus-veneris mRNA, clone: YMU001_000065_H06. (382 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8WP33|PFD6L_MACFA Prefoldin subunit 6-like protein OS=Macaca... 32 1.3 sp|Q9KJ75|PTMCB_STRMU PTS system mannitol-specific EIICB compone... 31 1.7 sp|P58745|MRAW_AGRT5 S-adenosyl-L-methionine-dependent methyltra... 31 1.7 sp|Q7SCY6|PFA4_NEUCR Palmitoyltransferase PFA4 OS=Neurospora cra... 30 3.7 sp|Q5UQE6|TOP2_MIMIV DNA topoisomerase 2 OS=Acanthamoeba polypha... 30 3.7 sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=2 30 3.7 sp|B2XWJ7|NDHH_FAGEA NAD(P)H-quinone oxidoreductase subunit H, c... 30 4.8 sp|P34338|YK14_CAEEL Uncharacterized protein C15H7.4 OS=Caenorha... 30 4.8 sp|Q5VVM6|PFD6L_HUMAN Prefoldin subunit 6-like protein OS=Homo s... 30 4.8 sp|A7GHI0|LEPA_CLOBL GTP-binding protein lepA OS=Clostridium bot... 29 6.3 sp|Q811D2|ANR26_MOUSE Ankyrin repeat domain-containing protein 2... 29 6.3 sp|Q89L00|SYS_BRAJA Seryl-tRNA synthetase OS=Bradyrhizobium japo... 29 8.2 sp|Q49WE9|RF3_STAS1 Peptide chain release factor 3 OS=Staphyloco... 29 8.2 sp|P0C6E0|NQRC_VIBCH Na(+)-translocating NADH-quinone reductase ... 29 8.2 sp|A5F5Y7|NQRC_VIBC3 Na(+)-translocating NADH-quinone reductase ... 29 8.2 sp|Q09591|MIX1_CAEEL Mitotic chromosome and X-chromosome-associa... 29 8.2 sp|A8G907|IF2_SERP5 Translation initiation factor IF-2 OS=Serrat... 29 8.2 sp|Q21X09|DNAK_RHOFD Chaperone protein dnaK OS=Rhodoferax ferrir... 29 8.2
>sp|Q8WP33|PFD6L_MACFA Prefoldin subunit 6-like protein OS=Macaca fascicularis GN=PFDN6L PE=2 SV=1 Length = 743
Score = 31.6 bits (70), Expect = 1.3 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 12/89 (13%) Frame = +3
Query: 120 EHLLKTQEKVDKAGK------WIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRK------ 263 E +L Q K++ A K I + ++ ++K+ EAT +K +EEQ+++ Sbjct: 354 EKILDLQRKLEHAHKVCLTDTCISEKQQLEEKIKEATENEAKVKQQYQEEQQKRKLLYQN 413
Query: 264 TRALHVRVTSLKNTGKVEEVTTLETHGHV 350 T LH +V +L++ + E+T + + Sbjct: 414 TDELHRQVRTLQDKENLLEMTCSQQQSRI 442
>sp|Q9KJ75|PTMCB_STRMU PTS system mannitol-specific EIICB component OS=Streptococcus mutans GN=mtlA PE=3 SV=2 Length = 589
Score = 31.2 bits (69), Expect = 1.7 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +3
Query: 138 QEKVDKAGKWIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRKT-RALHVRVTSLKNTGKV 314 ++KV KAG I + + + + +T + + + + +KT RA+HV V + T K Sbjct: 404 RDKVKKAGLDISVSNQAISNLQDTANTLIVTQEELADRAGQKTPRAVHVAVDNFLATSKY 463
Query: 315 EEVTTLETHG 344 +++ T+G Sbjct: 464 DDIIASLTNG 473
>sp|P58745|MRAW_AGRT5 S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=mraW PE=3 SV=1 Length = 341
Score = 31.2 bits (69), Expect = 1.7 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +3
Query: 180 KKGKDKMHEATSTSTIIKMTIEEEQKRKTRALHVRVTSLKNTGKVEEVT 326 +K KDK+H AT +++ + +E +AL SLK G++ VT Sbjct: 200 RKAKDKIHPATRVFQALRVFVNDELGELAQALFAAERSLKPGGRLVVVT 248
>sp|Q7SCY6|PFA4_NEUCR Palmitoyltransferase PFA4 OS=Neurospora crassa GN=pfa-4 PE=3 SV=1 Length = 486
Score = 30.0 bits (66), Expect = 3.7 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1
Query: 352 HTCPCVSRVVTSSTFPVFLRLVTRT*RALVF 260 H CP V+ TFP FLR + T ALV+ Sbjct: 130 HHCPWTGNCVSLQTFPHFLRFLVYTNAALVY 160
>sp|Q5UQE6|TOP2_MIMIV DNA topoisomerase 2 OS=Acanthamoeba polyphaga mimivirus GN=TOP2 PE=3 SV=1 Length = 1263
Score = 30.0 bits (66), Expect = 3.7 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 17/89 (19%) Frame = +3
Query: 90 QKARTTSSWAEHLLKTQEKVDKAGKWIEDAKK---GKDKMH-------------EATSTS 221 + +T W HL T EK+D A K+I AK GKD +H +A + Sbjct: 906 ENPKTMKPWFRHLTGTIEKIDGA-KYISRAKYEIIGKDTIHITDLPVGIWTDNYKAFLDN 964
Query: 222 TIIKMTIEE-EQKRKTRALHVRVTSLKNT 305 I++ T + E+K+ ++A V+S KNT Sbjct: 965 LIVQGTAQNAEEKKASKA----VSSAKNT 989
>sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=2 Length = 2033
Score = 30.0 bits (66), Expect = 3.7 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3
Query: 174 DAKKGKDKMHEATSTSTIIKMTIEEEQKRKTRALH 278 DAK+G + +A S +K +EEE+KR R H Sbjct: 899 DAKQGSESPAQAGRESEALKAQLEEERKRVARVQH 933
>sp|B2XWJ7|NDHH_FAGEA NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=ndhH PE=3 SV=1 Length = 393
Score = 29.6 bits (65), Expect = 4.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2
Query: 210 WLHASYLFLSLRPRSTFQLYQPFLVFSIDAP 118 W + Y F+S RP TF+L Q L ++AP Sbjct: 303 WNNFEYRFISKRPSPTFELSQQELYVRVEAP 333
>sp|P34338|YK14_CAEEL Uncharacterized protein C15H7.4 OS=Caenorhabditis elegans GN=C15H7.4 PE=2 SV=1 Length = 327
Score = 29.6 bits (65), Expect = 4.8 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3
Query: 132 KTQEKVDKAGKWIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRK 263 K +E V G + KKG D+ + T + T+ K + E +KRK Sbjct: 173 KKKEVVPNGGDKSVENKKGSDRNVKKTPSKTVTKPLLSESRKRK 216
>sp|Q5VVM6|PFD6L_HUMAN Prefoldin subunit 6-like protein OS=Homo sapiens GN=PFDN6L PE=2 SV=1 Length = 783
Score = 29.6 bits (65), Expect = 4.8 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 12/89 (13%) Frame = +3
Query: 120 EHLLKTQEKVDKAGK------WIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRK------ 263 E +L Q K++ A K I + ++ ++K+ EAT +K +EEQ+++ Sbjct: 354 EKILDLQRKLEHAHKVCLTDTCISEKQQLEEKIKEATQNEAKVKQQYQEEQQKRKLLYQN 413
Query: 264 TRALHVRVTSLKNTGKVEEVTTLETHGHV 350 LH +V +L++ + E+T + + Sbjct: 414 VDELHRQVRTLQDKENLLEMTCSQQQSRI 442
>sp|A7GHI0|LEPA_CLOBL GTP-binding protein lepA OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=lepA PE=3 SV=1 Length = 602
Score = 29.3 bits (64), Expect = 6.3 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Frame = +3
Query: 192 DKMHEATSTST--------IIKMTIEEEQKRKTRALHVRVTSLKNTGKVEEVTTLETHGH 347 D++ EAT T T + M +E+E+ ++ VR+ +NTG+ + ++T GH Sbjct: 27 DRLIEATGTLTEREMDTQVLDNMDLEKERGITIKSQAVRLIYKRNTGEEYTLNLIDTPGH 86
Query: 348 V 350 V Sbjct: 87 V 87
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4WN48 |
Definition |
tr|Q4WN48|Q4WN48_ASPFU Dynamin GTPase, putative OS=Aspergillus fumigatus |
Align length |
36 |
Score (bit) |
37.4 |
E-value |
0.37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915048|Adiantum capillus-veneris mRNA, clone: YMU001_000065_H06. (382 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4WN48|Q4WN48_ASPFU Dynamin GTPase, putative OS=Aspergillus f... 37 0.37 tr|B0Y7F1|B0Y7F1_ASPFC Dynamin GTPase, putative OS=Aspergillus f... 37 0.37 tr|Q7Q0K7|Q7Q0K7_ANOGA AGAP010286-PA (Fragment) OS=Anopheles gam... 37 0.63 tr|A0CFA3|A0CFA3_PARTE Chromosome undetermined scaffold_175, who... 35 1.8 tr|A9TTR5|A9TTR5_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.2 tr|A2DLA0|A2DLA0_TRIVA Putative uncharacterized protein OS=Trich... 33 5.3 tr|A7H150|A7H150_CAMC5 RDD protein OS=Campylobacter curvus (stra... 33 7.0 tr|Q560K9|Q560K9_CRYNE Putative uncharacterized protein OS=Crypt... 33 7.0 tr|A7GNP6|A7GNP6_BACCN ABC transporter-related protein OS=Bacill... 33 9.1 tr|Q306L2|Q306L2_XENNE 40kDa insecticidal toxin OS=Xenorhabdus n... 33 9.1 tr|A7XS54|A7XS54_XENNE 42 kDa insecticidal toxin OS=Xenorhabdus ... 33 9.1 tr|A8Q7U6|A8Q7U6_MALGO Putative uncharacterized protein OS=Malas... 33 9.1 tr|B7F9L6|B7F9L6_ORYSJ cDNA, clone: J090025K15, full insert sequ... 33 9.4 tr|B7WNQ5|B7WNQ5_HUMAN Putative uncharacterized protein ENSP0000... 26 9.6
>tr|Q4WN48|Q4WN48_ASPFU Dynamin GTPase, putative OS=Aspergillus fumigatus GN=AFUA_6G07630 PE=3 SV=1 Length = 814
Score = 37.4 bits (85), Expect = 0.37 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = +3
Query: 120 EHLLKTQEKVDKAGKWIEDAKKGKDKMHEATSTSTI 227 ++LLK +EKV KA +W+ AKK D M A S STI Sbjct: 760 QYLLKEKEKVLKAQEWLATAKKEDDAMDSADSDSTI 795
>tr|B0Y7F1|B0Y7F1_ASPFC Dynamin GTPase, putative OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_073590 PE=3 SV=1 Length = 814
Score = 37.4 bits (85), Expect = 0.37 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = +3
Query: 120 EHLLKTQEKVDKAGKWIEDAKKGKDKMHEATSTSTI 227 ++LLK +EKV KA +W+ AKK D M A S STI Sbjct: 760 QYLLKEKEKVLKAQEWLATAKKEDDAMDSADSDSTI 795
>tr|Q7Q0K7|Q7Q0K7_ANOGA AGAP010286-PA (Fragment) OS=Anopheles gambiae GN=AGAP010286 PE=4 SV=3 Length = 1128
Score = 36.6 bits (83), Expect = 0.63 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Frame = +3
Query: 90 QKARTTSSWA----EHLLKTQEKVDKAGKWIEDAK-KGKDKMHEATSTSTIIKMTIEEEQ 254 QKA T++ A + L +TQ+ +DKA K +EDAK + K E +++MT +EEQ Sbjct: 1029 QKAGGTAAAAGELNKQLTETQQMLDKASKELEDAKEEAKRSAAETERLLQLVQMT-QEEQ 1087
Query: 255 KRKTRALHVRVTSLKN 302 +K + + +LKN Sbjct: 1088 NQKEKTIMDLQQALKN 1103
>tr|A0CFA3|A0CFA3_PARTE Chromosome undetermined scaffold_175, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00037909001 PE=4 SV=1 Length = 635
Score = 35.0 bits (79), Expect = 1.8 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = +3
Query: 120 EHLLKTQEKVDKAGKWIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRKTRALHVRVTSLK 299 ++L+K + +V+K K I+D + DK H + K T E + ++K + L +++ L+ Sbjct: 72 QNLIKKESEVEKLNKEIQDYRVQADKQHSEGKSIVYSKSTKEFDLEKKIKELEIQINKLQ 131
>tr|A9TTR5|A9TTR5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_97015 PE=4 SV=1 Length = 303
Score = 33.9 bits (76), Expect = 4.2 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 4/46 (8%) Frame = +1
Query: 139 KKRLIKLESGSRTQRKEKI----RCMKPHRHPLLSK*QLRRSKRGR 264 K++ I+ ES SRT+R+E I RC+ P +HP + ++ R RGR Sbjct: 231 KRKEIEKESRSRTKRREMIKMQKRCVCPEKHPSEVRKKVSRFLRGR 276
>tr|A2DLA0|A2DLA0_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_295440 PE=4 SV=1 Length = 966
Score = 33.5 bits (75), Expect = 5.3 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +3
Query: 123 HLLKTQEKVDKAGKWIEDAKKG--KDKMHEATSTSTIIKMTIEEEQKRKTRALHVRVTSL 296 H +KT+ K DK ++DAK +DK+HEAT +TI + E K K +L+ + +L Sbjct: 488 HQIKTK-KCDKCE--VKDAKISNIEDKLHEATGNATISPIDAIEYLKNKISSLNSEIEAL 544
Query: 297 KNT 305 K + Sbjct: 545 KQS 547
>tr|A7H150|A7H150_CAMC5 RDD protein OS=Campylobacter curvus (strain 525.92) GN=Ccur92_18880 PE=4 SV=1 Length = 139
Score = 33.1 bits (74), Expect = 7.0 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3
Query: 224 SGCRCGFMHLIFSFLCVLDPLSSFINLFLCF 132 +GC+ GF+H I ++C + S + L LCF Sbjct: 87 NGCKIGFLHAILRYVCFILAGFSIVGLLLCF 117
>tr|Q560K9|Q560K9_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBA2310 PE=3 SV=1 Length = 1673
Score = 33.1 bits (74), Expect = 7.0 Identities = 16/67 (23%), Positives = 35/67 (52%) Frame = +3
Query: 99 RTTSSWAEHLLKTQEKVDKAGKWIEDAKKGKDKMHEATSTSTIIKMTIEEEQKRKTRALH 278 R+T++ EH+ + + + ++ GK +D + +D + A + +KM +E K Sbjct: 1606 RSTAACREHVAELEARREQMGKISQDQRSQRDSLQAAQAQVASLKMQLERAVDNKVGKKG 1665
Query: 279 VRVTSLK 299 +RV+ L+ Sbjct: 1666 LRVSCLR 1672
>tr|A7GNP6|A7GNP6_BACCN ABC transporter-related protein OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=Bcer98_1435 PE=3 SV=1 Length = 522
Score = 32.7 bits (73), Expect = 9.1 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 9/73 (12%) Frame = +3
Query: 141 EKVDKAGKWIEDAKKGKDKMHE-ATSTST--------IIKMTIEEEQKRKTRALHVRVTS 293 EK +K K +E+A K K+K E AT T I K ++QK+ + +T Sbjct: 179 EKYEKKKKQLEEAVKLKEKKAERATKTPKKEGKLEPKITKPYFAKKQKKLQKTATAMITR 238
Query: 294 LKNTGKVEEVTTL 332 L+ GKVE+V L Sbjct: 239 LEKLGKVEKVKEL 251
>tr|Q306L2|Q306L2_XENNE 40kDa insecticidal toxin OS=Xenorhabdus nematophilus GN=txp40 PE=4 SV=1 Length = 362
Score = 32.7 bits (73), Expect = 9.1 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 18/97 (18%) Frame = +3
Query: 105 TSSWAEHLLKTQE--------KVDKAGK-----WIEDAKKGKDKMHEATSTSTIIKMTIE 245 +S+W L K ++ K+D A K +I++ +KG D ATS T E Sbjct: 262 SSNWRVSLQKLRDNPSRNTFMKMDDAAKRKYSSFIKEVQKGNDPRAAATSIGTKSGSNFE 321
Query: 246 EEQKRKTRALHV----RVT-SLKNTGKVEEVTTLETH 341 + Q R ++ + RVT S+ NT ++ E+ ++ TH Sbjct: 322 KLQGRDLYSIRLSQEHRVTFSINNTDQIMEIQSVGTH 358
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