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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915051
Clone id YMU001_000065_H09
Library
Length 339
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAATATGGGGGCTCATCAGCAACCTCCCCGAGGTCGACTTCGTCGTCGTCGATGGCGGGG
GGAGGCGGGATGGAGGGGCACAAGCCGCAGTGCGTGTGTGCCCCAACAACTCATGAAGGA
TCATTCCGATGCCGTCTGCATCGGTCGTCGTCATCTAAGAAGTGGGACAAGATGACGTCT
GCTAACACAACCCCAGGTACAATCTCCCCCAACATCGAGGCGCAGTAGCCCCAGCTCCTT
ATATAGTCCTTTTGCCAAGGAGGTTACATACGCTTTATTCCTCTCTAAAGGATGCATAAT
CTTGATCAATATCTCTGGCTGTATTCTTTGGTTACTACG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915051|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_H09.
         (339 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9NY76
Definition tr|A9NY76|A9NY76_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 52.0
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915051|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_H09.
         (339 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NY76|A9NY76_PICSI Putative uncharacterized protein OS=Picea...    52   1e-05
tr|B6SH36|B6SH36_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|B6TQA4|B6TQA4_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|A7QXY0|A7QXY0_VITVI Chromosome undetermined scaffold_235, who...    49   1e-04
tr|Q7XSC7|Q7XSC7_ORYSJ OSJNBb0118P14.9 protein OS=Oryza sativa s...    49   2e-04
tr|Q7F8W7|Q7F8W7_ORYSJ OJ000315_02.4 protein OS=Oryza sativa sub...    49   2e-04
tr|Q01L50|Q01L50_ORYSA H0502B11.1 protein OS=Oryza sativa GN=H05...    49   2e-04
tr|B6U7D5|B6U7D5_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|Q9LXZ0|Q9LXZ0_ARATH Putative uncharacterized protein T5P19_15...    48   2e-04
tr|Q5ZF84|Q5ZF84_PLAMJ Putative uncharacterized protein OS=Plant...    47   4e-04
tr|A9TIC0|A9TIC0_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|A5AWM3|A5AWM3_VITVI Putative uncharacterized protein OS=Vitis...    47   4e-04
tr|Q7X6Y3|Q7X6Y3_ORYSA OSJNBa0014K14.12 protein OS=Oryza sativa ...    47   6e-04
tr|Q7F8Y8|Q7F8Y8_ORYSJ OSJNBb0116K07.4 protein OS=Oryza sativa s...    47   6e-04
tr|A3AVC8|A3AVC8_ORYSJ Putative uncharacterized protein OS=Oryza...    47   6e-04
tr|A2XVA5|A2XVA5_ORYSI Putative uncharacterized protein OS=Oryza...    47   6e-04
tr|Q9C9V7|Q9C9V7_ARATH Putative uncharacterized protein T23K23.2...    46   8e-04
tr|A9NYR1|A9NYR1_PICSI Putative uncharacterized protein OS=Picea...    46   8e-04
tr|A9NW60|A9NW60_PICSI Putative uncharacterized protein OS=Picea...    46   8e-04
tr|A9NRP8|A9NRP8_PICSI Putative uncharacterized protein OS=Picea...    46   8e-04
tr|A9P9J5|A9P9J5_POPTR Putative uncharacterized protein OS=Popul...    46   0.001
tr|A9U197|A9U197_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.001
tr|Q9ZTM9|Q9ZTM9_PETHY PGPS/D10 OS=Petunia hybrida GN=PGPS/D10 P...    45   0.002
tr|Q3HVP3|Q3HVP3_SOLTU Putative uncharacterized protein OS=Solan...    45   0.002
tr|Q6H886|Q6H886_ORYSJ Putative uncharacterized protein OJ1572_F...    45   0.002
tr|A2YEW1|A2YEW1_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A2X1P3|A2X1P3_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q69V63|Q69V63_ORYSJ Os06g0608000 protein OS=Oryza sativa subs...    44   0.003
tr|A9PHV6|A9PHV6_POPTR Putative uncharacterized protein OS=Popul...    44   0.003
tr|A9NKK5|A9NKK5_PICSI Putative uncharacterized protein OS=Picea...    44   0.003

>tr|A9NY76|A9NY76_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 99

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +1

Query: 91  CVCAPTTHEGSFRCRLHRSSSSKKWDKMTSANTTP 195
           C+C+PTTHEGSFRCRLHRS S   W K     TTP
Sbjct: 48  CLCSPTTHEGSFRCRLHRSPSG-YWGKKPMPTTTP 81


>tr|B6SH36|B6SH36_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 113

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +1

Query: 79  HKPQCVCAPTTHEGSFRCRLHRSSS 153
           H P+CVCAP TH GSF+CRLHRSSS
Sbjct: 50  HAPKCVCAPATHAGSFKCRLHRSSS 74


>tr|B6TQA4|B6TQA4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 108

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +1

Query: 79  HKPQCVCAPTTHEGSFRCRLHRSSS 153
           H P+CVCAP TH GSF+CRLHRSSS
Sbjct: 45  HGPKCVCAPATHAGSFKCRLHRSSS 69


>tr|A7QXY0|A7QXY0_VITVI Chromosome undetermined scaffold_235, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00009455001 PE=4 SV=1
          Length = 76

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +1

Query: 82  KPQCVCAPTTHEGSFRCRLHRSSSSKKWDKMTSAN 186
           K  C+C+PTTH GSFRCRLHR+ S ++   M SA+
Sbjct: 35  KSNCLCSPTTHAGSFRCRLHRAPSLQRTKSMDSAS 69


>tr|Q7XSC7|Q7XSC7_ORYSJ OSJNBb0118P14.9 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0118P14.9 PE=4 SV=2
          Length = 108

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 85  PQCVCAPTTHEGSFRCRLHRSSS 153
           P+CVCAP TH GSF+CRLHRSSS
Sbjct: 57  PKCVCAPATHAGSFKCRLHRSSS 79


>tr|Q7F8W7|Q7F8W7_ORYSJ OJ000315_02.4 protein OS=Oryza sativa subsp.
           japonica GN=OJ000315_02.4 PE=4 SV=1
          Length = 175

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 85  PQCVCAPTTHEGSFRCRLHRSSS 153
           P+CVCAP TH GSF+CRLHRSSS
Sbjct: 124 PKCVCAPATHAGSFKCRLHRSSS 146


>tr|Q01L50|Q01L50_ORYSA H0502B11.1 protein OS=Oryza sativa
           GN=H0502B11.1 PE=4 SV=1
          Length = 108

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 85  PQCVCAPTTHEGSFRCRLHRSSS 153
           P+CVCAP TH GSF+CRLHRSSS
Sbjct: 57  PKCVCAPATHAGSFKCRLHRSSS 79


>tr|B6U7D5|B6U7D5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 105

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +1

Query: 85  PQCVCAPTTHEGSFRCRLHRSSS 153
           P+CVCAP TH GSF+CRLHRSSS
Sbjct: 58  PKCVCAPATHAGSFKCRLHRSSS 80


>tr|Q9LXZ0|Q9LXZ0_ARATH Putative uncharacterized protein T5P19_150
           OS=Arabidopsis thaliana GN=T5P19_150 PE=4 SV=1
          Length = 110

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +1

Query: 82  KPQCVCAPTTHEGSFRCRLHRSSSS 156
           K  C+CAPT HEGSFRCRLHRSS++
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSAT 86


>tr|Q5ZF84|Q5ZF84_PLAMJ Putative uncharacterized protein OS=Plantago
           major PE=4 SV=1
          Length = 83

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +1

Query: 82  KPQCVCAPTTHEGSFRCRLHRSSSSKKWDKMTSANT--TPGTISPNIEAQ 225
           K  C+C+PTTH GSFRCRLHR+ S  +   + S+ +   P    P + AQ
Sbjct: 34  KHSCLCSPTTHAGSFRCRLHRAPSFNRTKSIDSSQSKAAPSNDIPVVNAQ 83