BP915052 |
Clone id |
YMU001_000065_H10 |
Library |
YMU01 |
Length |
450 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_H10. |
Accession |
BP915052 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2146Contig1 |
Sequence |
CTCGAAGGGTGCCACCAAGACTATCATGAGCGTTCCACTAACGACAGCCTCACCCTCTAG GGAACCCCTGAACAACATAAACTCCCAAGCATACAAGACAAGTACATCCGGCTTTTACAT GGAGCCGTAACCATACAGTATGACCAAAGAACCACGACCATACACAGGCTTTTTGCCAGG AAGCCAATAACCTACACAACACCAAACCCACGGACATGGGACTCCACAGCAAGGCCCAAC AATATGCAACCAAACCCTCCACAATCTTCGCAACCGAGCAAAAATTCCACCAGATCGAAC CACTGTAGTTGAGAAAACCTCGCAGCACCAAGACCGAACAAGGACACCAACACACGAACC AGAGCAGTACAGGTTGTCACACCATCCGCTCCCCCTATCCACCATCCGCCAGATTGTGGC GAGCAGGAAACTCCTCGGGTGGAGAAGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0AAS4 |
Definition |
sp|P0AAS4|YBBJ_SHIFL Inner membrane protein ybbJ OS=Shigella flexneri |
Align length |
80 |
Score (bit) |
32.3 |
E-value |
0.95 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94QQ3 |
Definition |
tr|Q94QQ3|Q94QQ3_9BIVA ATP synthase subunit a OS=Inversidens japanensis |
Align length |
70 |
Score (bit) |
33.1 |
E-value |
0.021 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915052|Adiantum capillus-veneris mRNA, clone: YMU001_000065_H10. (450 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q94QQ3|Q94QQ3_9BIVA ATP synthase subunit a OS=Inversidens jap... 33 0.021 tr|A9WMW1|A9WMW1_RENSM Hypothetical membrane protein OS=Renibact... 37 0.50 tr|Q3JKP8|Q3JKP8_BURP1 Putative uncharacterized protein OS=Burkh... 36 0.85 tr|Q0C1Y5|Q0C1Y5_HYPNA NnrU family protein OS=Hyphomonas neptuni... 35 1.9 tr|A9VF71|A9VF71_BACWK Putative uncharacterized protein OS=Bacil... 35 2.5 tr|B8J2I6|B8J2I6_DESDE Na+/solute symporter OS=Desulfovibrio des... 35 2.5 tr|A8RWX1|A8RWX1_9CLOT Putative uncharacterized protein OS=Clost... 35 2.5 tr|B6N9J0|B6N9J0_BRAFL Putative uncharacterized protein OS=Branc... 35 2.5 tr|Q2H3D6|Q2H3D6_CHAGB Predicted protein OS=Chaetomium globosum ... 35 2.5 tr|A6XAT7|A6XAT7_9PERO Rhodopsin (Fragment) OS=Serranus atricaud... 34 3.2 tr|A4L4E6|A4L4E6_9PERO Rhodopsin (Fragment) OS=Serranus scriba G... 34 3.2 tr|A4L4E4|A4L4E4_9PERO Rhodopsin (Fragment) OS=Serranus hepatus ... 34 3.2 tr|A4L4E0|A4L4E0_SERCB Rhodopsin (Fragment) OS=Serranus cabrilla... 34 3.2 tr|A4L408|A4L408_9PERO Rhodopsin (Fragment) OS=Serranus atricaud... 34 3.2 tr|Q5G1D0|Q5G1D0_9HYME Rhodopsin (Fragment) OS=Leptanilla sp. D2... 34 3.2 tr|A6XAT9|A6XAT9_9PERO Rhodopsin (Fragment) OS=Serranus scriba G... 34 4.2 tr|B4KM12|B4KM12_DROMO GI21300 OS=Drosophila mojavensis GN=GI213... 33 5.5 tr|A7SGH3|A7SGH3_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 5.5 tr|B2VWW2|B2VWW2_PYRTR Predicted protein OS=Pyrenophora tritici-... 33 5.5 tr|A6RGU6|A6RGU6_AJECN Predicted protein OS=Ajellomyces capsulat... 33 5.5 tr|B6SWC0|B6SWC0_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.2 tr|A1CJ61|A1CJ61_ASPCL Putative uncharacterized protein OS=Asper... 33 7.2 tr|Q0VFJ3|Q0VFJ3_XENTR Dlg5 protein (Fragment) OS=Xenopus tropic... 33 9.4 tr|Q13KF7|Q13KF7_BURXL Putative membrane protein OS=Burkholderia... 33 9.4 tr|B5ETK3|B5ETK3_VIBFM DNA internalization-related competence pr... 33 9.4 tr|B1FSM2|B1FSM2_9BURK Permease OS=Burkholderia graminis C4D1M G... 33 9.4 tr|A3A4P3|A3A4P3_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.4 tr|Q4N597|Q4N597_THEPA Translocation protein sec62, putative OS=... 33 9.4 tr|A8C5R2|A8C5R2_9HYME Long-wavelength sensitive opsin (Fragment... 33 9.4 tr|Q978C7|Q978C7_THEVO Modification methylase OS=Thermoplasma vo... 33 9.4
>tr|Q94QQ3|Q94QQ3_9BIVA ATP synthase subunit a OS=Inversidens japanensis GN=ATP6 PE=3 SV=1 Length = 220
Score = 33.1 bits (74), Expect(2) = 0.021 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = -2
Query: 446 FSTRGVSCSPQSGGWWIGGADGVTTCTALVRVLVSLFGLGAARFSQLQWFDLVEFLLGCE 267 F G++ PQ GG+W+GG + +RV+ SL G+ + + F LGC Sbjct: 30 FVVGGLAVYPQKGGFWVGG-------SWFLRVVHSLMGVVFQIVVDCKGYRFGGFSLGC- 81
Query: 266 DCGGFGCILL 237 GGF ++L Sbjct: 82 -VGGFWMLVL 90
Score = 27.7 bits (60), Expect(2) = 0.021 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -3
Query: 235 ALLWSPMSVGLVLCRLLASWQ--KACVWSW--FFGH 140 A L S +SVGL L L SW C +SW F GH Sbjct: 101 ASLTSQLSVGLSLALLWWSWSTLSGCFYSWKSFLGH 136
>tr|A9WMW1|A9WMW1_RENSM Hypothetical membrane protein OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=RSal33209_1686 PE=4 SV=1 Length = 282
Score = 37.0 bits (84), Expect = 0.50 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 13/115 (11%) Frame = -3
Query: 370 VLLWFVCWCPCSVLVLRGFL--------NYSGSIWWNFCS----VAKIVEGLVAYCWALL 227 +LL F+ P +VLVL GFL + G W N S VA + + A L Sbjct: 1 MLLGFMILTPLAVLVLAGFLIVNGVNMMRHEGRSWGNLLSLIAGVALLTLPVFAVLLVLT 60
Query: 226 WSPMSVGL-VLCRLLASWQKACVWSWFFGHTVWLRLHVKAGCTCLVCLGVYVVQG 65 W P+++GL L L S+ + V+ R+ + +V LG ++ G Sbjct: 61 WQPIAIGLAALLFFLCSYFGVVFVVFLVYAVVYGRMRYQRSPDAVVVLGSQIING 115
>tr|Q3JKP8|Q3JKP8_BURP1 Putative uncharacterized protein OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_A0696 PE=4 SV=1 Length = 1225
Score = 36.2 bits (82), Expect = 0.85 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +2
Query: 266 LRNRAKIPPDRTTVVEKTSQHQDRTRTPTHEPEQYRLSHHPLPLSTIRQIVASRKLLGWR 445 L R + P V++ +Q R R H PEQ+R HH LP RQ R + R Sbjct: 589 LHARLRYPHPHRQRVDEQAQRSIRLRASLHPPEQHRAEHHVLPPRRARQHQPPRHMHHAR 648
Query: 446 R 448 R Sbjct: 649 R 649
>tr|Q0C1Y5|Q0C1Y5_HYPNA NnrU family protein OS=Hyphomonas neptunium (strain ATCC 15444) GN=HNE_1547 PE=4 SV=1 Length = 237
Score = 35.0 bits (79), Expect = 1.9 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -3
Query: 268 KIVEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVWSWFFG-HTVWLRLHVKAGCTCLV 92 ++V L + + L+S +S+ L ++A+ + VW WF+G H +WL + A LV Sbjct: 37 RLVSLLGRWAYLALYSAVSLALFAWLIIAAGRAPYVWLWFWGPHGLWLANGLMALALLLV 96
Query: 91 CLGVYVVQGFPRG 53 G + F G Sbjct: 97 IGGTAIANPFSLG 109
>tr|A9VF71|A9VF71_BACWK Putative uncharacterized protein OS=Bacillus weihenstephanensis (strain KBAB4) GN=BcerKBAB4_2227 PE=4 SV=1 Length = 296
Score = 34.7 bits (78), Expect = 2.5 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -3
Query: 316 FLNYSGSIWWNFCSVAKI--VEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVWSWF 149 F NY+ WW+F +A I + G + W L W MS ++ +L C+ ++F Sbjct: 206 FFNYTAQTWWSFIGLAFIATILGQTIFNWLLKW--MSATVISMSILGETIGTCILAYF 261
>tr|B8J2I6|B8J2I6_DESDE Na+/solute symporter OS=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GN=Ddes_0154 PE=3 SV=1 Length = 531
Score = 34.7 bits (78), Expect = 2.5 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = -3
Query: 334 VLVLRGFLNYSGSIWWN-FCSVAKIVEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVW 158 +++L G+L + WWN F A+ AL WS + L L+A +W Sbjct: 366 LMILFGYLRSEQAAWWNIFAWTARNGATFAPMVAALFWSVATPRGSLTALIAGCGAGLIW 425
Query: 157 SWFFGHTV---WLRLH 119 +W G V +L++H Sbjct: 426 NWLGGWAVGSFYLKIH 441
>tr|A8RWX1|A8RWX1_9CLOT Putative uncharacterized protein OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_04726 PE=4 SV=1 Length = 354
Score = 34.7 bits (78), Expect = 2.5 Identities = 21/54 (38%), Positives = 28/54 (51%) Frame = -2
Query: 395 GGADGVTTCTALVRVLVSLFGLGAARFSQLQWFDLVEFLLGCEDCGGFGCILLG 234 GG G+ CTA +R FG G + S++ D+VE + GG GCI LG Sbjct: 256 GGVMGINYCTAFLRD----FGPGEEQLSRIS--DMVEHMKHIRKIGGIGCIGLG 303
>tr|B6N9J0|B6N9J0_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126631 PE=4 SV=1 Length = 1548
Score = 34.7 bits (78), Expect = 2.5 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -3
Query: 358 FVCWCPCSVLVLRGFLNYSGSIWWNFCSVAKIVEGLVAYCWALLW--SPMSVGLVLCRLL 185 FVC +L +GS+W+ S +V G+V C A+ W S + + LVL LL Sbjct: 1472 FVCASTMDIL--------NGSLWYERLSRYAVVVGMVLACLAVAWRFSALEMSLVLVALL 1523
Query: 184 ASWQKACVWSW 152 + Q A + W Sbjct: 1524 LTAQLADHYRW 1534
>tr|Q2H3D6|Q2H3D6_CHAGB Predicted protein OS=Chaetomium globosum GN=CHGG_03710 PE=4 SV=1 Length = 594
Score = 34.7 bits (78), Expect = 2.5 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +3
Query: 90 HTRQVHPAF--TWSRNHTV*PKNHDHTQAFCQEANNLHNTK 206 HT Q+ PA T+ R H P NHD T A C N L +TK Sbjct: 292 HTHQLSPAAYNTYCRRHVGRPVNHDDTIAACGRRNALDDTK 332
>tr|A6XAT7|A6XAT7_9PERO Rhodopsin (Fragment) OS=Serranus atricauda GN=rhod PE=4 SV=1 Length = 153
Score = 34.3 bits (77), Expect = 3.2 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -3
Query: 388 RMV*QPVLLWFVCWCPCSVLVLRGFLNYSGSIWWNFCS 275 RMV V+ + VCWCP Y+G WW FC+ Sbjct: 101 RMVVMMVVAFLVCWCP-----------YAGVAWWIFCN 127
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