BP915058 |
Clone id |
YMU001_000066_A05 |
Library |
YMU01 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000066_A05. |
Accession |
BP915058 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2052Contig1 |
Sequence |
ACAGTAGGCTGTTTGTTATTGAGGACAGCAGCCTCAACCGAAGCTCCCATGGAGGTGATG CCCGCGCACCTGGTTGGCCTGCCCTTTGAGGGACCCTTCGACTAGAAGCGGATGCGATAT TGGGGTACGTCAGATGCACGGGAGAAGCTCTGGAGTCAGGTTTTAACATTGGAACTTTGT TAGCAGGGTGGATTGTTAGTGGAAACTGGCCATTTTTGGTGGAATGTTGAAGACAGCAGG GCATAGAAATTGTCAGGAGGGAGATAGGCATTTTTTTGTTGATGATCTGGATGGTAACAA ACATGAAGTTTTCTCTTATCAATGTTGCTGATGAGAAGGTGTATCCGAGCTTGGATATAT TTATGTTTCTATATTGAAGCATGGGACCTAGCAACTCTTCACTGGATTGGTTTTCAACGA TGAGTGCCAGGGCTGTGGAAGTTTTGAAGTCATTGCTGTTATGGAGTAGGCAATGTGATG GCCATGGTAATACAATCTATAGAATTATAGACTTGTTATTTTGTAATGTCCTAATCTTAT GGGATGAGTATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P25439 |
Definition |
sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster |
Align length |
59 |
Score (bit) |
30.8 |
E-value |
0.89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6RF23 |
Definition |
tr|A6RF23|A6RF23_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) |
Align length |
80 |
Score (bit) |
35.4 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915058|Adiantum capillus-veneris mRNA, clone: YMU001_000066_A05. (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6RF23|A6RF23_AJECN Predicted protein OS=Ajellomyces capsulat... 35 2.0 tr|B4Q4A1|B4Q4A1_DROSI GD23855 OS=Drosophila simulans GN=GD23855... 34 4.5 tr|B8MYC5|B8MYC5_ASPFL Endoplasmic reticulum and nuclear membran... 34 4.5 tr|B0CYK8|B0CYK8_LACBS Predicted protein OS=Laccaria bicolor (st... 34 4.5 tr|A1IIE1|A1IIE1_PHACA Aryl hydrocarbon receptor nuclear translo... 34 5.9 tr|Q1Z7H3|Q1Z7H3_PHOPR Outer membrane protein OmpW OS=Photobacte... 34 5.9 tr|A3SAJ6|A3SAJ6_9RHOB Alpha/beta hydrolase OS=Sulfitobacter sp.... 34 5.9 tr|Q11Y01|Q11Y01_CYTH3 Putative uncharacterized protein OS=Cytop... 33 7.7 tr|B8BAR1|B8BAR1_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.7 tr|Q3S4K4|Q3S4K4_9CORO Spike glycoprotein S1 subunit (Fragment) ... 33 10.0 tr|A8KYD3|A8KYD3_FRASN Short-chain dehydrogenase/reductase SDR O... 33 10.0 tr|A3SVX3|A3SVX3_9RHOB Predicted hydrolase or acyltransferase (A... 33 10.0 tr|Q5N9D4|Q5N9D4_ORYSJ Putative uncharacterized protein P0505D12... 33 10.0
>tr|A6RF23|A6RF23_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_08238 PE=4 SV=1 Length = 700
Score = 35.4 bits (80), Expect = 2.0 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%) Frame = -3
Query: 268 PISLLTISMPCCL------QHSTKNGQF---PLTIHPANKVPMLKPDSRASPVHLTYPNI 116 PI+ TI+ P L QH + F PL H ++ P +P + SP +T P + Sbjct: 189 PINRSTIAAPRALTFHQLQQHHHYHNHFNSGPLQSHSSDSNP--RPQTSTSPRSVTPPTV 246
Query: 115 ASASSRRVPQRAGQPGARAS 56 ASA++ + Q + QP AS Sbjct: 247 ASATTAYITQSSSQPTIAAS 266
>tr|B4Q4A1|B4Q4A1_DROSI GD23855 OS=Drosophila simulans GN=GD23855 PE=4 SV=1 Length = 1095
Score = 34.3 bits (77), Expect = 4.5 Identities = 21/75 (28%), Positives = 37/75 (49%) Frame = -3
Query: 439 STALALIVENQSSEELLGPMLQYRNINISKLGYTFSSATLIRENFMFVTIQIINKKMPIS 260 +T L +++S + + Y I+I+ LG + S ++R M ++ KKMP+ Sbjct: 481 TTYLLTAAPSRNSVRSVDAVHSYAEIDINALGASRKSP-ILRPTLMSDELRKEFKKMPVG 539
Query: 259 LLTISMPCCLQHSTK 215 I PCC HS++ Sbjct: 540 GFNIRSPCCRDHSSE 554
>tr|B8MYC5|B8MYC5_ASPFL Endoplasmic reticulum and nuclear membrane proteinc Npl4, putative OS=Aspergillus flavus NRRL3357 GN=AFLA_080620 PE=4 SV=1 Length = 603
Score = 34.3 bits (77), Expect = 4.5 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = -3
Query: 247 SMPCCLQHSTKNGQFPLTIHPANKVPMLK--------PDSRASPVHLTYPNIASASSRRV 92 S P L+ ++NGQF LT+ P P LK PD+ S ++L+ I + R+ Sbjct: 3 SRPIVLRFESRNGQFRLTVSPQELFPSLKQKILEHLPPDTEPSSINLSNKPIGTGGDERL 62
>tr|B0CYK8|B0CYK8_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_311906 PE=4 SV=1 Length = 386
Score = 34.3 bits (77), Expect = 4.5 Identities = 23/91 (25%), Positives = 41/91 (45%) Frame = -3
Query: 283 INKKMPISLLTISMPCCLQHSTKNGQFPLTIHPANKVPMLKPDSRASPVHLTYPNIASAS 104 + ++P++ + + LQ+ T P +++PM P S A PV P +S Sbjct: 272 LRNQIPMASMPSPLSSSLQYQTPLASMPPPTSSPSRMPMSSPSSTAVPVVSMSPPPSSPL 331
Query: 103 SRRVPQRAGQPGARASPPWELRLRLLSSITN 11 R+P ASPP+ +R+ S +T+ Sbjct: 332 QNRIPM--------ASPPFS-SVRMTSPVTH 353
>tr|A1IIE1|A1IIE1_PHACA Aryl hydrocarbon receptor nuclear translocator 1 OS=Phalacrocorax carbo GN=arnt 1 PE=2 SV=1 Length = 807
Score = 33.9 bits (76), Expect = 5.9 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -3
Query: 187 PANKVPMLKPDSRASPVHLTYPNIASASSRRVPQRAGQP 71 P++ PM P S ASP YPN+AS + P+ A P Sbjct: 697 PSSFSPMAAPGSTASPTGAAYPNLASRGTGFTPEAAQTP 735
>tr|Q1Z7H3|Q1Z7H3_PHOPR Outer membrane protein OmpW OS=Photobacterium profundum 3TCK GN=P3TCK_15055 PE=4 SV=1 Length = 212
Score = 33.9 bits (76), Expect = 5.9 Identities = 21/71 (29%), Positives = 38/71 (53%) Frame = -3
Query: 469 LLHNSNDFKTSTALALIVENQSSEELLGPMLQYRNINISKLGYTFSSATLIRENFMFVTI 290 L H DF +A +V N+SS+++LG + +++ + ++LG TF +I +N F + Sbjct: 21 LAHKKGDFLVRAGIASVVPNESSDDVLG-LGEFKIDSNTQLGLTF--GYMITDNISFEVL 77
Query: 289 QIINKKMPISL 257 K +SL Sbjct: 78 AATPFKHKVSL 88
>tr|A3SAJ6|A3SAJ6_9RHOB Alpha/beta hydrolase OS=Sulfitobacter sp. EE-36 GN=EE36_14912 PE=4 SV=1 Length = 320
Score = 33.9 bits (76), Expect = 5.9 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Frame = -3
Query: 277 KKMPISLLTISMPCCLQHSTKNGQFPLTIHPANKVPMLK-------PDSRASPVHLTYPN 119 KKM T++MP L H T + PL +H A P L P P H+T P+ Sbjct: 246 KKMVPKYDTLTMPVELIHGTADTIVPLDVHAAIATPQLPDAVLTTLPGIGHMPQHVTQPD 305
Query: 118 IASASSRRVPQRAG 77 + +A R RAG Sbjct: 306 VIAAID-RAATRAG 318
>tr|Q11Y01|Q11Y01_CYTH3 Putative uncharacterized protein OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=CHU_0425 PE=4 SV=1 Length = 158
Score = 33.5 bits (75), Expect = 7.7 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = -3
Query: 385 PMLQYRNINISKLGYTFSSATLIRENFMFVTIQIINKKMPISLLTISMPCCLQHSTKNGQ 206 P + + + + Y++S + M +I INKK+ + L+ C KN Sbjct: 70 PTVNFNKYLLLNVTYSYSGCEQKIDRKMLYSIDHINKKLTLYLIVYEKGVCRPSFYKNDI 129
Query: 205 FPLTIHP-ANKVPMLKPDSRASPVHL 131 FP+ + P + ++ + KPD +PV + Sbjct: 130 FPIPVIPDSYRIEIHKPDK--APVEI 153
>tr|B8BAR1|B8BAR1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29206 PE=4 SV=1 Length = 819
Score = 33.5 bits (75), Expect = 7.7 Identities = 21/63 (33%), Positives = 25/63 (39%) Frame = -3
Query: 238 CCLQHSTKNGQFPLTIHPANKVPMLKPDSRASPVHLTYPNIASASSRRVPQRAGQPGARA 59 C + S + P T NK P P R P H P AS P+R+ P R Sbjct: 558 CIILWSKADVVIPGTPAATNKPPSPPPSPRDPPDHDDSPGAPDASPSPPPKRSPSPPPRR 617
Query: 58 SPP 50 SPP Sbjct: 618 SPP 620
>tr|Q3S4K4|Q3S4K4_9CORO Spike glycoprotein S1 subunit (Fragment) OS=Infectious bronchitis virus GN=S1 PE=4 SV=1 Length = 539
Score = 33.1 bits (74), Expect = 10.0 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -3
Query: 448 FKTSTALALIVENQSSEELLGPMLQYRNINISKLGYTFSSATLIRENFMFVTIQIINKKM 269 F TA +I+ + S + LL QY N S Y F+++TL+RENF+ +N + Sbjct: 212 FVNGTAQDVILCDNSPKGLLA--CQYNTGNFSDGFYPFTNSTLVRENFIVYRESSVNTTL 269
Query: 268 PISLLTIS 245 ++ T + Sbjct: 270 ALTNFTFT 277
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