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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915061
Clone id YMU001_000066_A08
Library
Length 103
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCGGCAGCGAGAAAAGGCTCGTAGTGATCCAATGAAGTCCAAGAGGCCAAATCTGCCAGT
AACAGGACCAGGCTTCGGAGGAAGAGTGGGTACGACAAAAGGC
■■Homology search results ■■ -
sp_hit_id Q5EB92
Definition sp|Q5EB92|WDR70_RAT WD repeat-containing protein 70 OS=Rattus norvegicus
Align length 34
Score (bit) 45.4
E-value 9.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915061|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_A08.
         (103 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5EB92|WDR70_RAT WD repeat-containing protein 70 OS=Rattus no...    45   9e-05
sp|Q3TWF6|WDR70_MOUSE WD repeat-containing protein 70 OS=Mus mus...    45   9e-05
sp|Q9NW82|WDR70_HUMAN WD repeat-containing protein 70 OS=Homo sa...    45   9e-05
sp|Q32LB0|WDR70_BOVIN WD repeat-containing protein 70 OS=Bos tau...    45   9e-05
sp|Q0VA16|WDR70_XENTR WD repeat-containing protein 70 OS=Xenopus...    45   1e-04
sp|Q6GPP0|WDR70_XENLA WD repeat-containing protein 70 OS=Xenopus...    45   1e-04
sp|Q9W1J3|GAD1_DROME Gastrulation defective protein 1 homolog OS...    41   0.002
sp|Q9BXA9|SALL3_HUMAN Sal-like protein 3 OS=Homo sapiens GN=SALL...    29   8.5  

>sp|Q5EB92|WDR70_RAT WD repeat-containing protein 70 OS=Rattus
           norvegicus GN=Wdr70 PE=2 SV=1
          Length = 655

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 550 KQLEKDRLDPLKSHKPEPPVAGPGRGGRVGTHGG 583


>sp|Q3TWF6|WDR70_MOUSE WD repeat-containing protein 70 OS=Mus
           musculus GN=Wdr70 PE=2 SV=1
          Length = 657

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 552 KQLEKDRLDPLKSHKPEPPVAGPGRGGRVGTHGG 585


>sp|Q9NW82|WDR70_HUMAN WD repeat-containing protein 70 OS=Homo
           sapiens GN=WDR70 PE=1 SV=1
          Length = 654

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 549 KQLEKDRLDPLKSHKPEPPVAGPGRGGRVGTHGG 582


>sp|Q32LB0|WDR70_BOVIN WD repeat-containing protein 70 OS=Bos taurus
           GN=WDR70 PE=2 SV=1
          Length = 652

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 547 KQLEKDRLDPLKSHKPEPPVAGPGRGGRVGTHGG 580


>sp|Q0VA16|WDR70_XENTR WD repeat-containing protein 70 OS=Xenopus
           tropicalis GN=wdr70 PE=2 SV=1
          Length = 622

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 517 KQLEKDRLDPVKSHKPEPPVAGPGRGGRVGTHGG 550


>sp|Q6GPP0|WDR70_XENLA WD repeat-containing protein 70 OS=Xenopus
           laevis GN=wdr70 PE=2 SV=2
          Length = 622

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           +Q EK R DP+KS +P  PV GPG GGRVGT  G
Sbjct: 517 KQLEKDRLDPVKSHKPEPPVAGPGRGGRVGTHGG 550


>sp|Q9W1J3|GAD1_DROME Gastrulation defective protein 1 homolog
           OS=Drosophila melanogaster GN=CG5543 PE=2 SV=1
          Length = 655

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           ++ EKAR DP+KS+RP+LP+T  G GGRV ++ G
Sbjct: 550 KRMEKARMDPVKSQRPDLPITS-GQGGRVASSGG 582


>sp|Q9BXA9|SALL3_HUMAN Sal-like protein 3 OS=Homo sapiens GN=SALL3
            PE=2 SV=1
          Length = 1300

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 11   EKARSDPMKSKRPNLPVTGPGFGGRVG 91
            E+ +  P+K++RP+ P   PG GG  G
Sbjct: 926  EEPQEIPLKTERPDSPAAAPGSGGAPG 952
tr_hit_id A9NV21
Definition tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 34
Score (bit) 65.5
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915061|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_A08.
         (103 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea...    65   1e-09
tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella paten...    65   2e-09
tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome...    59   1e-07
tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subs...    57   4e-07
tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE...    56   8e-07
tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/...    54   3e-06
tr|A8N0S3|A8N0S3_COPC7 Putative uncharacterized protein OS=Copri...    52   2e-05
tr|B0CPB9|B0CPB9_LACBS Predicted protein OS=Laccaria bicolor (st...    51   3e-05
tr|B7QE59|B7QE59_IXOSC WD-repeat protein, putative OS=Ixodes sca...    46   0.001
tr|A8K564|A8K564_HUMAN cDNA FLJ76716, highly similar to Homo sap...    45   0.001
tr|B6LG29|B6LG29_BRAFL Putative uncharacterized protein OS=Branc...    44   0.004
tr|A7RL14|A7RL14_NEMVE Predicted protein (Fragment) OS=Nematoste...    44   0.004
tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseud...    42   0.012
tr|B4MYD5|B4MYD5_DROWI GK22197 OS=Drosophila willistoni GN=GK221...    42   0.012
tr|B4KNM9|B4KNM9_DROMO GI20836 OS=Drosophila mojavensis GN=GI208...    42   0.012
tr|B4J6L5|B4J6L5_DROGR GH20751 OS=Drosophila grimshawi GN=GH2075...    42   0.012
tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL110...    42   0.012
tr|B3ME80|B3ME80_DROAN GF12507 OS=Drosophila ananassae GN=GF1250...    42   0.012
tr|B4LM82|B4LM82_DROVI GJ20568 OS=Drosophila virilis GN=GJ20568 ...    42   0.016
tr|B4QAZ6|B4QAZ6_DROSI GD11798 OS=Drosophila simulans GN=GD11798...    41   0.035
tr|B4PA68|B4PA68_DROYA GE14326 OS=Drosophila yakuba GN=GE14326 P...    41   0.035
tr|B4I8T4|B4I8T4_DROSE GM16049 OS=Drosophila sechellia GN=GM1604...    41   0.035
tr|B3NPS5|B3NPS5_DROER GG22888 OS=Drosophila erecta GN=GG22888 P...    41   0.035
tr|B3S013|B3S013_TRIAD Putative uncharacterized protein OS=Trich...    40   0.045
tr|Q4SJF2|Q4SJF2_TETNG Chromosome 4 SCAF14575, whole genome shot...    40   0.059
tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci...    40   0.078
tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes...    39   0.17 

>tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 543

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREKAR DP+KS+RP+LPVTGPGFGGRVG+TKG
Sbjct: 447 RQREKARIDPIKSQRPDLPVTGPGFGGRVGSTKG 480


>tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_199066 PE=4 SV=1
          Length = 666

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           R REKAR+DP+KSKRP+LP++GPGFGGRVGTTKG
Sbjct: 568 RAREKARNDPIKSKRPDLPMSGPGFGGRVGTTKG 601


>tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028489001
           PE=4 SV=1
          Length = 511

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREK   DP+KS +P LP+TGPGFGGRVG+TKG
Sbjct: 414 RQREKILKDPIKSHKPELPITGPGFGGRVGSTKG 447


>tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0071K18.5 PE=4 SV=1
          Length = 646

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREK   DP+KS +P  PV GPGFGGRVGTTKG
Sbjct: 548 RQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKG 581


>tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030560 PE=4 SV=1
          Length = 571

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREK   DP+KS +P  PV GPGFGGRVGTTKG
Sbjct: 473 RQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKG 506


>tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33932 PE=4 SV=1
          Length = 644

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREK   DP+KS +P  PV GPGFGGRVGTTKG
Sbjct: 546 RQREKILKDPLKSHKPEAPVNGPGFGGRVGTTKG 579


>tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE=2
           SV=1
          Length = 622

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTTKG 103
           RQREK   DP+KS +P  PV GPG+GGRVGTTKG
Sbjct: 525 RQREKILKDPLKSHKPEAPVNGPGYGGRVGTTKG 558


>tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein
           (At2g20330/F11A3.12) OS=Arabidopsis thaliana
           GN=At2g20330 PE=2 SV=1
          Length = 648

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTT 97
           R+REKA  DPMKS +P +P+TGPG GGRVGTT
Sbjct: 547 REREKALKDPMKSHKPEIPMTGPGHGGRVGTT 578


>tr|A8N0S3|A8N0S3_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_08620 PE=4 SV=1
          Length = 1380

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTT 97
           R+REK R DP KS+RP LPVTGPG GGRVG +
Sbjct: 496 RKREKDRMDPRKSRRPELPVTGPGKGGRVGAS 527


>tr|B0CPB9|B0CPB9_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_379903 PE=4 SV=1
          Length = 553

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 2   RQREKARSDPMKSKRPNLPVTGPGFGGRVGTT 97
           R+REK R DP KS+RP LPVTGPG GGRVG +
Sbjct: 483 RKREKDRLDPRKSRRPELPVTGPGKGGRVGAS 514