BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915081|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_C08.
         (454 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0TR88|Y1407_CLOP1 UPF0313 protein CPF_1407 OS=Clostridium pe...    32   1.7  
sp|Q0STL9|Y1216_CLOPS UPF0313 protein CPR_1216 OS=Clostridium pe...    32   1.7  
sp|Q8XL46|Y1196_CLOPE UPF0313 protein CPE1196 OS=Clostridium per...    32   1.7  
sp|Q9M9R6|PPR43_ARATH Pentatricopeptide repeat-containing protei...    31   2.2  
sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protei...    30   3.8  
sp|Q10RB4|BGAL5_ORYSJ Beta-galactosidase 5 OS=Oryza sativa subsp...    30   4.9  

>sp|Q0TR88|Y1407_CLOP1 UPF0313 protein CPF_1407 OS=Clostridium
           perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
           GN=CPF_1407 PE=3 SV=1
          Length = 662

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 125 WSKFRGLIHKRS*QSSNLRRPVCKSQLALQA*IHQ 21
           +  F+G IH     ++N R+P CK QL L A  H+
Sbjct: 345 YDDFKGYIHDIGGPTANFRKPACKKQLTLGACKHK 379


>sp|Q0STL9|Y1216_CLOPS UPF0313 protein CPR_1216 OS=Clostridium
           perfringens (strain SM101 / Type A) GN=CPR_1216 PE=3
           SV=1
          Length = 662

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 125 WSKFRGLIHKRS*QSSNLRRPVCKSQLALQA*IHQ 21
           +  F+G IH     ++N R+P CK QL L A  H+
Sbjct: 345 YDDFKGYIHDIGGPTANFRKPACKKQLTLGACKHK 379


>sp|Q8XL46|Y1196_CLOPE UPF0313 protein CPE1196 OS=Clostridium
           perfringens GN=CPE1196 PE=3 SV=1
          Length = 662

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 125 WSKFRGLIHKRS*QSSNLRRPVCKSQLALQA*IHQ 21
           +  F+G IH     ++N R+P CK QL L A  H+
Sbjct: 345 YDDFKGYIHDIGGPTANFRKPACKKQLTLGACKHK 379


>sp|Q9M9R6|PPR43_ARATH Pentatricopeptide repeat-containing protein
           At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2
          Length = 540

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 360 MPKKCPKNVVSWSAVTARYVHGSEAELAQDYW 265
           MPK+   NVVSW+++ A Y H  +A LA +++
Sbjct: 357 MPKR---NVVSWNSLIAGYAHNGQAALAIEFF 385


>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein
           At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
          Length = 705

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -2

Query: 342 KNVVSWSAVTARYVHGSEAELAQD-YWR 262
           +NVVSW+A+   YVH  + ++A+  +W+
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWK 135


>sp|Q10RB4|BGAL5_ORYSJ Beta-galactosidase 5 OS=Oryza sativa subsp.
           japonica GN=Os03g0165400 PE=2 SV=1
          Length = 841

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 226 KIWLRYHD-QQYWLGKHVLDCKGCAVAESYCAAKCGA 119
           +IW+      +YW      DCKGC    SY A KC A
Sbjct: 646 QIWINGQSIGRYWTAYAEGDCKGCHYTGSYRAPKCQA 682

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915081|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_C08.
         (454 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q24W35|Q24W35_DESHY Putative uncharacterized protein OS=Desul...    33   9.3  
tr|B8G088|B8G088_DESHD Radical SAM domain protein OS=Desulfitoba...    33   9.3  

>tr|Q24W35|Q24W35_DESHY Putative uncharacterized protein
           OS=Desulfitobacterium hafniense (strain Y51) GN=DSY1968
           PE=4 SV=1
          Length = 642

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -3

Query: 125 WS-KFRGLIHKRS*QSSNLRRPVCKSQLALQA*IHQE 18
           WS +F+G IH     ++N RRP CK+QL   A  H++
Sbjct: 345 WSPRFKGYIHDVGGPTANFRRPACKAQLKRGACPHKQ 381


>tr|B8G088|B8G088_DESHD Radical SAM domain protein
           OS=Desulfitobacterium hafniense (strain DCB-2)
           GN=Dhaf_3126 PE=4 SV=1
          Length = 642

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -3

Query: 125 WS-KFRGLIHKRS*QSSNLRRPVCKSQLALQA*IHQE 18
           WS +F+G IH     ++N RRP CK+QL   A  H++
Sbjct: 345 WSPRFKGYIHDVGGPTANFRRPACKAQLKRGACPHKQ 381