BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915085|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_C12.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22893|TTP_MOUSE Tristetraproline OS=Mus musculus GN=Zfp36 PE...    30   7.1  
sp|Q504C1|LRIT2_DANRE Leucine-rich repeat, immunoglobulin-like d...    30   7.1  

>sp|P22893|TTP_MOUSE Tristetraproline OS=Mus musculus GN=Zfp36 PE=1
           SV=1
          Length = 319

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 16/84 (19%)
 Frame = +1

Query: 199 KVSYTH*FYMKGS-NHGARC---------------PHRLGHSIDVFGLPLVEPSSPLFSN 330
           K    H FY++G   +G+RC               PH L  SI   GLP    SSP    
Sbjct: 135 KTELCHKFYLQGRCPYGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLPSGRRSSPPPPG 194

Query: 331 FSTMKGKE*L*TLLQPSSNPPIMG 402
           FS   G         PSS+PP  G
Sbjct: 195 FS---GPSLSSCSFSPSSSPPPPG 215


>sp|Q504C1|LRIT2_DANRE Leucine-rich repeat, immunoglobulin-like
           domain and transmembrane domain-containing protein 2
           OS=Danio rerio GN=lrit2 PE=2 SV=2
          Length = 561

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -2

Query: 169 LCPKTKYSIRRLIYIEAPR*EEYVNC*TGESFEE*RKHEDLIYLLPMLL 23
           L P TKY I   +  +APR  + +   TG  F E  + E LI+++ ++L
Sbjct: 422 LLPATKYEICVTLKNQAPRIGQCIVFVTGSDFNEMEQREKLIHIVVIVL 470

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915085|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_C12.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4JCU0|B4JCU0_DROGR GH10633 OS=Drosophila grimshawi GN=GH1063...    34   4.0  
tr|B7P794|B7P794_IXOSC Microtubule-associated protein CP224, put...    33   8.8  

>tr|B4JCU0|B4JCU0_DROGR GH10633 OS=Drosophila grimshawi GN=GH10633
           PE=4 SV=1
          Length = 786

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +1

Query: 40  SISNPHAFV----TLQRIRRSSNLHTPLTWEPQCKSDVELSILF*GIAKASVLS*GRKVS 207
           SI NPH F      +Q +++  NL+  L+  P+ KSD +   LF  + +   L   R  +
Sbjct: 205 SIRNPHMFTFDPALMQELQQLRNLNLKLSQPPEHKSDKQQQRLFISMQQLEQLRLSRATN 264

Query: 208 YTH*FYMKGS 237
           Y +   +KGS
Sbjct: 265 YLNATMLKGS 274


>tr|B7P794|B7P794_IXOSC Microtubule-associated protein CP224, putative
            (Fragment) OS=Ixodes scapularis GN=IscW_ISCW000916 PE=4
            SV=1
          Length = 1763

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 229  KGSNHGARCPHRLGHSIDVFGLPLVEPSSPL 321
            K +   A C   LGH ++VFG+ + EPS P+
Sbjct: 1325 KNARQRAECLEELGHLVEVFGVSVCEPSPPV 1355