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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915089
Clone id YMU001_000066_D04
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTAGAGACCACCCATTTTCCATAGGGATTCATTATCGGGAAACAATCGATTCTCAATAG
CAGAAAGCATTCAATGAACTGCTGTACAGGAACAAACCAAAGGGTTGATATCATAGATAC
AGAAGTCTAGGAGGTGTACCGATCATTGTTGTTAAAAGTACAATGCAGACAGTAAAGAGG
AATCTCTGTCCTTCAAAACCATCGGTACGTGTTCAAATTGAATCTACCGTTCTCCCCTTT
GCTCAGGGGTGAGACCACCTGTACCACAACTGGGACAGCTCACAAGGCCAAATCCCTGAC
AATCAAAACACTTCCATCTTTCAAACAGGTTTCCATTTTTCTTGTTCTTGCCACTGCCCT
TGCACCCTGGGCACTCCACTGCACCTTTCCCTCTACACTTGCCACAACTTTTTCCACCTG
ATGAGATGTTGAGGC
■■Homology search results ■■ -
sp_hit_id Q9Y2M2
Definition sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sapiens
Align length 18
Score (bit) 30.8
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915089|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D04.
         (435 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sa...    31   2.5  
sp|A9HWL4|COXX_BORPD Protoheme IX farnesyltransferase OS=Bordete...    30   4.3  
sp|A1ALM1|KUP_PELPD Probable potassium transport system protein ...    30   4.4  
sp|Q62611|ILRL1_RAT Interleukin-1 receptor-like 1 OS=Rattus norv...    30   4.4  
sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog OS...    29   9.6  
sp|P40504|KTR7_YEAST Probable mannosyltransferase KTR7 OS=Saccha...    29   9.8  

>sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo
           sapiens GN=C3orf32 PE=2 SV=1
          Length = 353

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 319 RWKCFDCQGFGLVSCPSC 266
           R+KC  C G G V CPSC
Sbjct: 163 RYKCSGCHGAGTVRCPSC 180


>sp|A9HWL4|COXX_BORPD Protoheme IX farnesyltransferase OS=Bordetella
           petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
           GN=ctaB PE=3 SV=1
          Length = 297

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
 Frame = +2

Query: 182 ISVLQNHRYVFKLNLPFSPLLRGEXXXXXXXXAHKAKSLTIKTLPSFKQVSIFLVLATAL 361
           +++ +NH Y  K  LP  P+  G+         +    +   TLP   ++S  L LA+AL
Sbjct: 189 LALYRNHDYA-KAGLPMLPVTHGQRFTRLHILLYSLALVATTTLPYIIRMSGLLYLASAL 247

Query: 362 A--------PWALHCTFPSTLA 403
           A         W L+  +   LA
Sbjct: 248 ALGGMFVAYAWRLYREYSDALA 269


>sp|A1ALM1|KUP_PELPD Probable potassium transport system protein kup
           OS=Pelobacter propionicus (strain DSM 2379) GN=kup PE=3
           SV=1
          Length = 605

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 183 IPLYCLHCTFNNNDRYTS*TSVSMISTLWFVPVQQFIECFLLLRIDCFPIMNPY 22
           IP Y +HCT  +N  Y     +S++ T     V+  +EC +   +D F I   Y
Sbjct: 485 IPPYLVHCTIRSNIVYERNVLISIVRTDEPFGVESVLECGIGTGLDGFMIKAGY 538


>sp|Q62611|ILRL1_RAT Interleukin-1 receptor-like 1 OS=Rattus
           norvegicus GN=Il1rl1 PE=2 SV=1
          Length = 566

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -1

Query: 234 ENGRFNLNTYRWF*RTEIPLYCLHCTFNNNDRYTS*TSVSMISTLWFVPVQQFIEC 67
           + G  N+  Y+     +IP Y ++ T + +D+ +  T  ++    W  PVQ F  C
Sbjct: 102 KTGSLNVTIYKRPPNCKIPDYMMYSTVDGSDKNSKITCPTIALYNWTAPVQWFKNC 157


>sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 340

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 319 RWKCFDCQGFGLVSCPSC 266
           R+KC  C G G+V C SC
Sbjct: 186 RYKCSGCHGAGMVRCSSC 203


>sp|P40504|KTR7_YEAST Probable mannosyltransferase KTR7
           OS=Saccharomyces cerevisiae GN=KTR7 PE=1 SV=1
          Length = 517

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 292 IPDNQNTSIFQTGFHFSCSCHCPC 363
           +   +N + F  G++F C C C C
Sbjct: 437 LQSQENLNTFDEGYNFGCGCRCVC 460
tr_hit_id B6U3Z1
Definition tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 52
Score (bit) 81.3
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915089|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D04.
         (435 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea m...    81   2e-14
tr|Q9SKA5|Q9SKA5_ARATH F12K8.2 protein (At1g22630/F12K8_2) OS=Ar...    80   7e-14
tr|B8AWW2|B8AWW2_ORYSI Putative uncharacterized protein OS=Oryza...    79   9e-14
tr|A9T6P3|A9T6P3_PHYPA Predicted protein OS=Physcomitrella paten...    78   3e-13
tr|A9NX85|A9NX85_PICSI Putative uncharacterized protein OS=Picea...    78   3e-13
tr|A3AZ43|A3AZ43_ORYSJ Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|A9PJC7|A9PJC7_POPJC Putative uncharacterized protein OS=Popul...    75   2e-12
tr|Q0DLE6|Q0DLE6_ORYSJ Os05g0105800 protein (Fragment) OS=Oryza ...    73   6e-12
tr|A2QXD4|A2QXD4_ASPNC Similarity: only the N-terminal regions h...    34   4.1  
tr|Q9KP88|Q9KP88_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A5F5E7|A5F5E7_VIBC3 Transcriptional regulator, LysR family OS...    33   7.1  
tr|A6Y6N2|A6Y6N2_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A6Y086|A6Y086_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A6AGG4|A6AGG4_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A6A6G2|A6A6G2_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A3H151|A3H151_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A3GR20|A3GR20_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A3EGI5|A3EGI5_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A2PVJ6|A2PVJ6_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A2PIE6|A2PIE6_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A2PBC9|A2PBC9_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A1F8A8|A1F8A8_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  
tr|A1ER50|A1ER50_VIBCH Transcriptional regulator, LysR family OS...    33   7.1  

>tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 119

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 36/52 (69%), Positives = 38/52 (73%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           AVECP            N+FERWKCFDCQGFGL SCP+CG GGLTPEQRGER
Sbjct: 68  AVECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCPTCGKGGLTPEQRGER 119


>tr|Q9SKA5|Q9SKA5_ARATH F12K8.2 protein (At1g22630/F12K8_2)
           OS=Arabidopsis thaliana GN=At1g22630 PE=4 SV=1
          Length = 110

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           A+ECP            N+FERWKCFDCQGFG+ SCP CG GGLTPEQRGER
Sbjct: 59  AIECPGCKGTGKNKKNGNMFERWKCFDCQGFGMKSCPKCGKGGLTPEQRGER 110


>tr|B8AWW2|B8AWW2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_18119 PE=4 SV=1
          Length = 105

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 36/52 (69%), Positives = 37/52 (71%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           AVECP            N+FERWKCFDCQGFGL SCPSCG  GLTPEQRGER
Sbjct: 54  AVECPGCKGTGRNKKNGNIFERWKCFDCQGFGLKSCPSCGKEGLTPEQRGER 105


>tr|A9T6P3|A9T6P3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168385 PE=4 SV=1
          Length = 121

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 34/51 (66%), Positives = 36/51 (70%)
 Frame = -3

Query: 379 VECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           VEC             N+FERWKCFDCQGFGLV CP+CG GGLTPEQRGER
Sbjct: 71  VECQGCKGTGKNKKNGNMFERWKCFDCQGFGLVKCPNCGAGGLTPEQRGER 121


>tr|A9NX85|A9NX85_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 127

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           A+EC             N+FERWKC+DCQGFGL+SCP+CG GGLTPEQRGER
Sbjct: 76  AIECQGCKGTGKNKKNGNMFERWKCYDCQGFGLLSCPTCGKGGLTPEQRGER 127


>tr|A3AZ43|A3AZ43_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_016065 PE=4 SV=1
          Length = 434

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 35/51 (68%), Positives = 36/51 (70%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGE 230
           AVECP            N+FERWKCFDCQGFGL SCPSCG  GLTPEQRGE
Sbjct: 54  AVECPGCKGTGRNKKNGNIFERWKCFDCQGFGLKSCPSCGKEGLTPEQRGE 104


>tr|A9PJC7|A9PJC7_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=4 SV=1
          Length = 118

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 34/52 (65%), Positives = 36/52 (69%)
 Frame = -3

Query: 382 AVECPXXXXXXXXXXXXNLFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           A+EC             N+FERWKCFDCQGF L SCPSCG GGLTPEQRGER
Sbjct: 67  AMECSGCKGTGKNKKNGNIFERWKCFDCQGFVLKSCPSCGKGGLTPEQRGER 118


>tr|Q0DLE6|Q0DLE6_ORYSJ Os05g0105800 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os05g0105800 PE=4 SV=1
          Length = 44

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = -3

Query: 328 LFERWKCFDCQGFGLVSCPSCGTGGLTPEQRGER 227
           +FERWKCFDCQGFGL SCPSCG  GLTPEQRGER
Sbjct: 11  IFERWKCFDCQGFGLKSCPSCGKEGLTPEQRGER 44


>tr|A2QXD4|A2QXD4_ASPNC Similarity: only the N-terminal regions have
           similarities OS=Aspergillus niger (strain CBS 513.88 /
           FGSC A1513) GN=An11g08520 PE=4 SV=1
          Length = 608

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -1

Query: 210 TYRWF*RTEIPLYCLHCTFNNNDRYTS*TSVSMISTLWFVPVQQFIECFLLLRIDCFP 37
           +YR+F  TE P Y +H    +    T  T VS   ++  +P Q+F +C+ +L+    P
Sbjct: 379 SYRYFPLTEAPRYIIHGPSEDESEQTR-TKVSDNGSILHLPAQRFGQCYAVLQFSTNP 435


>tr|Q9KP88|Q9KP88_VIBCH Transcriptional regulator, LysR family
           OS=Vibrio cholerae GN=VC_2485 PE=4 SV=1
          Length = 321

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +1

Query: 61  QKAFNELLYRNKPKG*YHRYRSLGGVPIIVVKSTMQTVKRNLCPSKPSVRVQIESTVLPF 240
           Q++F+EL YR+     Y+   SL  V  +V +S + TV         + R +++    PF
Sbjct: 223 QRSFSELAYRDFDCQSYYEGTSLSNVLYVVGQSELVTVAPRWMAENAANRDELQILAFPF 282

Query: 241 AQG*DHLYHNWDSS 282
           A+     Y +W  S
Sbjct: 283 AESKISGYLSWHES 296