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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915091
Clone id YMU001_000066_D06
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTCTCAAGCTGAAGTGACAACAAAAATTTAGTAAGAAGACTCAAATGACTACACCTTT
CAATGTGATGATGTATTACATGACTCCTTCCAGGAGACCAACTAGGGAATCAAAACTGTT
GATGGTTGAACTTACAATGCCATCTCACTCTGCAGAAATAATGAGCTAGCGAGTAGCTAG
AATCAGCATTCGTATAAAATGCAAGGAATCTCCTTTCATTGAATGGCATACACAGAGGAC
CACTTTTTCCATGGTAAAACCAGTAAGCATTAAGATGCGAGAAACTTGAGGGGTTTTGTC
TGTGCCATTGATGATGGAAAGACGAAGATTTGTATGCAGGCAAGTGACTGCTGGAAGCCA
GCATTATAACGCTTGGCAATAAGGTTAAATTGAGAGAGTTGTTGGGGGCCAGAAACAATA
GGAACCAGCTTGCATGAGATGACATTCTTGACGTAAGGAAGAATATGTATGCTATCACTA
TGTGCTCCAGATAAAATGAAACCAGTCGAATCTGC
■■Homology search results ■■ -
sp_hit_id Q5FC78
Definition sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8 OS=Caenorhabditis elegans
Align length 53
Score (bit) 31.2
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915091|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D06.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8 OS=Caenorha...    31   3.0  
sp|P21451|EDNRB_RAT Endothelin B receptor OS=Rattus norvegicus G...    30   8.7  
sp|P48302|EDNRB_MOUSE Endothelin B receptor OS=Mus musculus GN=E...    30   8.7  

>sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8
           OS=Caenorhabditis elegans GN=F27E5.8 PE=2 SV=1
          Length = 349

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 351 AVTCLHTNLRLSIINGTDKTPQVSRILMLTGFTMEKVVLCVCH---SMKGDSL 202
           + +CLH NLR+ I N       +  ILM  G  M  V LC+ H    M+G SL
Sbjct: 56  STSCLHLNLRILICNCC-----LGFILMAVGRAMIAVPLCIAHLRDVMRGASL 103


>sp|P21451|EDNRB_RAT Endothelin B receptor OS=Rattus norvegicus
           GN=Ednrb PE=2 SV=2
          Length = 442

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 256 YHGKSGPLCM--PFNERRFLAFYTNADSSYSLAHYFC 152
           Y GK   +CM  PF +  F+ FY  A   +  + YFC
Sbjct: 247 YKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFC 283


>sp|P48302|EDNRB_MOUSE Endothelin B receptor OS=Mus musculus
           GN=Ednrb PE=2 SV=1
          Length = 442

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 256 YHGKSGPLCM--PFNERRFLAFYTNADSSYSLAHYFC 152
           Y GK   +CM  PF +  F+ FY  A   +  + YFC
Sbjct: 247 YKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFC 283
tr_hit_id Q9FKY7
Definition tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18 OS=Arabidopsis thaliana
Align length 76
Score (bit) 69.3
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915091|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D06.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A1...    69   1e-10
tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g6595...    69   1e-10
tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis...    69   1e-10
tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein OJ1479_B...    61   3e-08
tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza...    61   3e-08
tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza...    61   3e-08
tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimar...    39   0.20 
tr|A7BTV4|A7BTV4_9GAMM Putative uncharacterized protein OS=Beggi...    37   0.44 
tr|Q013M6|Q013M6_OSTTA [S] KOG4386 Uncharacterized conserved pro...    34   3.7  
tr|A0Z485|A0Z485_9GAMM Putative adenylate cyclase OS=marine gamm...    33   8.3  

>tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18
            OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1194

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 33/76 (43%), Positives = 49/76 (64%)
 Frame = -1

Query: 515  ADSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLAC 336
            AD+  F+LSG+HS+++ +LP  ++V+S KLVP+  G QQL +  L + RY A FQ S   
Sbjct: 1115 ADAQSFVLSGSHSNTVSVLPKSEHVLSYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVA 1174

Query: 335  IQIFVFPSSMAQTKPL 288
              +FVFPS+    K +
Sbjct: 1175 SSVFVFPSAPQAEKAI 1190


>tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g65950
            OS=Arabidopsis thaliana GN=At5g65950 PE=2 SV=1
          Length = 865

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 33/76 (43%), Positives = 49/76 (64%)
 Frame = -1

Query: 515  ADSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLAC 336
            AD+  F+LSG+HS+++ +LP  ++V+S KLVP+  G QQL +  L + RY A FQ S   
Sbjct: 786  ADAQSFVLSGSHSNTVSVLPKSEHVLSYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVA 845

Query: 335  IQIFVFPSSMAQTKPL 288
              +FVFPS+    K +
Sbjct: 846  SSVFVFPSAPQAEKAI 861


>tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_007638 PE=4 SV=1
          Length = 962

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 31/66 (46%), Positives = 47/66 (71%)
 Frame = -1

Query: 512  DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACI 333
            DS  F+LSG+H+D+I ++P  ++ +S  LVP+ SG QQL +  + + RY+AGFQ ++A  
Sbjct: 892  DSPSFVLSGSHNDTIFVIPKTEHSLSYMLVPLASGSQQLPRVTVTSVRYSAGFQPTIAAS 951

Query: 332  QIFVFP 315
             IFVFP
Sbjct: 952  TIFVFP 957


>tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein
           OJ1479_B12.25-2 (Putative uncharacterized protein
           OJ1191_G08.1-2) OS=Oryza sativa subsp. japonica
           GN=OJ1479_B12.25-2 PE=4 SV=1
          Length = 723

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -1

Query: 512 DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACI 333
           DS  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +  
Sbjct: 639 DSQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAA 698

Query: 332 QIFVFPS 312
            +FV+PS
Sbjct: 699 TVFVYPS 705


>tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_007863 PE=4 SV=1
          Length = 1177

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -1

Query: 512  DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACI 333
            DS  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +  
Sbjct: 1093 DSQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAA 1152

Query: 332  QIFVFPS 312
             +FV+PS
Sbjct: 1153 TVFVYPS 1159


>tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_08680 PE=4 SV=1
          Length = 1177

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -1

Query: 512  DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACI 333
            DS  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +  
Sbjct: 1093 DSQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAA 1152

Query: 332  QIFVFPS 312
             +FV+PS
Sbjct: 1153 TVFVYPS 1159


>tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimarinus
            (strain CCE9901) GN=OSTLU_87978 PE=4 SV=1
          Length = 1092

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 21/66 (31%), Positives = 36/66 (54%)
 Frame = -1

Query: 512  DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACI 333
            DSTGF+ +G    ++++ P         LVPIV+G   L + +L A+R++A F   +   
Sbjct: 1025 DSTGFVFAGIKRGTMYVPPLSTASFYFLLVPIVTGSAILPELSLGAERFSATFVPPIESR 1084

Query: 332  QIFVFP 315
            ++ V P
Sbjct: 1085 RVIVRP 1090


>tr|A7BTV4|A7BTV4_9GAMM Putative uncharacterized protein
           OS=Beggiatoa sp. PS GN=BGP_1161 PE=4 SV=1
          Length = 630

 Score = 37.4 bits (85), Expect = 0.44
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
 Frame = -2

Query: 316 HHQWHRQNPSSFSHLNAYWFYHGKSGPLCM-------PFNERR--FLAFYTNADSSYSLA 164
           HHQ    NP+S SH   Y  Y  KSG L +        FN ++  F+ +  +A++S SL+
Sbjct: 463 HHQHDENNPASLSHNEVYAIYEDKSGSLWIGTLGGLNQFNAKQGTFVHYQYDANNSNSLS 522

Query: 163 H 161
           H
Sbjct: 523 H 523


>tr|Q013M6|Q013M6_OSTTA [S] KOG4386 Uncharacterized conserved protein
            OS=Ostreococcus tauri GN=Ot08g01640 PE=4 SV=1
          Length = 1475

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -1

Query: 512  DSTGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGF 354
            DS GF+ SG    ++++ P     +   LVP+ +G   L +  L A+R +A F
Sbjct: 1000 DSAGFVFSGYRRTTMYVPPLSNASLYLLLVPVSTGEMMLPELALSAERLSAKF 1052


>tr|A0Z485|A0Z485_9GAMM Putative adenylate cyclase OS=marine gamma
           proteobacterium HTCC2080 GN=MGP2080_09753 PE=4 SV=1
          Length = 946

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -2

Query: 355 SSSHLPAYKSSSFHHQWHRQNPSSFSHLNAYWFYHG-KSGPLCMPFNERRF-LAFYTNAD 182
           +S+ +P Y+ +      +  +PS F  LNA W YH     P  +P  ER+  LA   N D
Sbjct: 616 ASAAVPEYERAMNLCNDYPDSPSLFYALNAVWSYHAMHCSPAALPLVERQLTLAEQLNYD 675

Query: 181 SSYSLA 164
           +++ LA
Sbjct: 676 TTHVLA 681