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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915107
Clone id YMU001_000066_E11
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGTAGCTATACTGTCCTCAACCTATCAAAGGCCTGCAGGCTTGACATGAACTTCTCCA
AATTTATCTCCTCCTCCTCCTCCAATTGTACTCGCTATTCAAATCTTTTAGCAGGGTTTG
GACATCATTTTAAGGTGGGCACAATTAGAGGGAGCATGTTTGGAAGCTTACGAGCGCCCA
ATAAATCTTGTCATTAATGGCCTTGCTTATGGTGTTTAAGTATCAGTAGGCTCAAGATTT
GAACGATTTTGTGTTCTTGAATGTATAAAAAGTGCCCTTGTATTCTTGATCTTTGTCTTG
AAAATGATCAAAAGATCATCCGATTTAGTCATTTCCACCAAAACAAAGGAGGACCTTGCC
TATTCTTTAATCAAGTGATTAGCAAACAACCCATTTTTAGTCGCTTTTGGTTCTAATGTA
AGGAGGACATAGCCTACTACAATGCCCTCATTGATTCATTCCTTAAGAAAGGTGATGTCT
AGTGAGTGTTTGAATTTGGTAGCAATGAAAGCTGCAAAA
■■Homology search results ■■ -
sp_hit_id A8EWM4
Definition sp|A8EWM4|PGK_ARCB4 Phosphoglycerate kinase OS=Arcobacter butzleri (strain RM4018)
Align length 46
Score (bit) 30.0
E-value 6.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915107|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_E11.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8EWM4|PGK_ARCB4 Phosphoglycerate kinase OS=Arcobacter butzle...    30   6.8  
sp|A6Q539|PGK_NITSB Phosphoglycerate kinase OS=Nitratiruptor sp....    30   8.8  

>sp|A8EWM4|PGK_ARCB4 Phosphoglycerate kinase OS=Arcobacter butzleri
           (strain RM4018) GN=pgk PE=3 SV=1
          Length = 400

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 294 CLENDQKIIRFSHFHQNKGGPCLFFNQVISKQPIFSRFWF*CKEDI 431
           C+++D  +I  SHF + KGG    F +  S  PI  R     K+DI
Sbjct: 48  CIDHDCSVILSSHFGRPKGG----FEEKYSLLPIAKRLHILLKQDI 89


>sp|A6Q539|PGK_NITSB Phosphoglycerate kinase OS=Nitratiruptor sp.
           (strain SB155-2) GN=pgk PE=3 SV=1
          Length = 399

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 294 CLENDQKIIRFSHFHQNKGGPCLFFNQVISKQPIFSRFWF*CKEDI 431
           CL+ND KI+  SH  + KG     F++  S +P+  R     K+DI
Sbjct: 49  CLDNDCKIVLGSHLGRPKG-----FDEKYSLKPVAKRLHTLLKQDI 89
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915107|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_E11.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******