| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915115|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F08.
(144 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 77 3e-14
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 69 5e-12
sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chlorop... 69 9e-12
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 69 9e-12
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 69 9e-12
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 69 9e-12
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 68 1e-11
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 68 1e-11
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 68 1e-11
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 68 2e-11
sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 68 2e-11
sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 68 2e-11
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 68 2e-11
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 68 2e-11
sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 68 2e-11
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 68 2e-11
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 68 2e-11
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 68 2e-11
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 68 2e-11
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 68 2e-11
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 68 2e-11
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 68 2e-11
sp|P15192|CB22_PINSY Chlorophyll a-b binding protein type 2 memb... 68 2e-11
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 68 2e-11
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 68 2e-11
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 68 2e-11
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 68 2e-11
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 68 2e-11
sp|P14584|CB21_RAPSA Chlorophyll a-b binding of LHCII type 1 pro... 68 2e-11
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 68 2e-11
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 77.0 bits (188), Expect = 3e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMF+MLGFF+QAYVTG+GPVENLA HLSDPF
Sbjct: 224 KEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPF 262
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 69.3 bits (168), Expect = 5e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPFARQS 14
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA H++DP A +
Sbjct: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNA 253
>sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48,
chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1
Length = 264
Score = 68.6 bits (166), Expect = 9e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDP 248
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 68.6 bits (166), Expect = 9e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 221 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 258
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A,
chloroplastic OS=Pyrus pyrifolia PE=2 SV=1
Length = 278
Score = 68.6 bits (166), Expect = 9e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 225 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member
1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 68.6 bits (166), Expect = 9e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 225 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 262
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic
OS=Pisum sativum GN=CAB8 PE=1 SV=1
Length = 268
Score = 68.2 bits (165), Expect = 1e-11
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KE+KNGRLAMFSM GFF+QA VTG+GP+ENLA HLSDP
Sbjct: 215 KELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDP 252
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5,
chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5
PE=2 SV=1
Length = 237
Score = 68.2 bits (165), Expect = 1e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPFARQS 14
KEIKNGRLAMFSM GFF+QA VTG+GP+ENL+ H++DP A +
Sbjct: 184 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNA 226
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 68.2 bits (165), Expect = 1e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPFARQS 14
KEIKNGRLAMFSM GFF+QA VTG+GP+ENL+ H++DP A +
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNA 254
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 67.8 bits (164), Expect = 2e-11
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDP 29
KEIKNGRLAMFSM GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915115|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F08.
(144 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q00321|Q00321_SOLLC Type I (26 kD) CP29 polypeptide OS=Solanu... 81 2e-14
tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb... 81 3e-14
tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella paten... 80 7e-14
tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea... 80 7e-14
tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea... 80 7e-14
tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea... 80 7e-14
tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromos... 79 1e-13
tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26 ... 79 2e-13
tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment) OS=Physcomit... 79 2e-13
tr|B7SAW2|B7SAW2_9POAL Chloroplast chlorophyll a/b binding prote... 78 2e-13
tr|Q53N83|Q53N83_ORYSJ Chlorophyll A-B binding protein, expresse... 77 4e-13
tr|Q53N82|Q53N82_ORYSJ Chlorophyll A-B binding protein, expresse... 77 4e-13
tr|B7EX82|B7EX82_ORYSJ cDNA clone:001-041-F05, full insert seque... 77 4e-13
tr|A6MZY2|A6MZY2_ORYSI Chloroplast chlorophyll a-b binding prote... 77 4e-13
tr|A2ZD01|A2ZD01_ORYSI Putative uncharacterized protein OS=Oryza... 77 4e-13
tr|Q40039|Q40039_HORVU Precursor of CP29, core chlorophyll a/b b... 77 6e-13
tr|Q946G1|Q946G1_9ASTR ASCAB9-A (Fragment) OS=Dubautia latifolia... 76 7e-13
tr|Q946F9|Q946F9_9ASTR ASCAB9-A (Fragment) OS=Dubautia raillardi... 76 7e-13
tr|Q946F8|Q946F8_9ASTR ASCAB9-A (Fragment) OS=Dubautia sherffian... 76 7e-13
tr|Q946F7|Q946F7_ARGSA ASCAB9-B (Fragment) OS=Argyroxiphium sand... 76 7e-13
tr|Q946F6|Q946F6_ARGSA ASCAB9-C (Fragment) OS=Argyroxiphium sand... 76 7e-13
tr|Q946F5|Q946F5_9ASTR ASCAB9-C (Fragment) OS=Dubautia latifolia... 76 7e-13
tr|Q946F4|Q946F4_9ASTR ASCAB9-C (Fragment) OS=Dubautia laxa GN=A... 76 7e-13
tr|Q946F3|Q946F3_9ASTR ASCAB9-C (Fragment) OS=Dubautia scabra GN... 76 7e-13
tr|Q946F2|Q946F2_WILGY ASCAB9-C (Fragment) OS=Wilkesia gymnoxiph... 76 7e-13
tr|Q946F1|Q946F1_9ASTR ASCAB9 (Fragment) OS=Centromadia pungens ... 76 7e-13
tr|Q946E9|Q946E9_9ASTR ASCAB9 (Fragment) OS=Harmonia nutans GN=A... 76 7e-13
tr|Q946E8|Q946E8_OSMTE ASCAB9 (Fragment) OS=Osmadenia tenella GN... 76 7e-13
tr|Q946E6|Q946E6_9ASTR ASCAB9 (Fragment) OS=Anisocarpus scabridu... 76 7e-13
tr|Q93WA1|Q93WA1_ARGCA ASCAB9-A (ASCAB9-B) (Fragment) OS=Argyrox... 76 7e-13
>tr|Q00321|Q00321_SOLLC Type I (26 kD) CP29 polypeptide OS=Solanum
lycopersicum GN=Cab9 PE=4 SV=1
Length = 286
Score = 81.3 bits (199), Expect = 2e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTGQGPVENLAAHLSDPF
Sbjct: 230 KEIKNGRLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPF 268
>tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb5*1
PE=2 SV=1
Length = 302
Score = 80.9 bits (198), Expect = 3e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFFLQAYVTG+GPVENLAAHLSDPF
Sbjct: 246 KEIKNGRLAMFSMLGFFLQAYVTGEGPVENLAAHLSDPF 284
>tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_156993 PE=4 SV=1
Length = 270
Score = 79.7 bits (195), Expect = 7e-14
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 214 KEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPF 252
>tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 303
Score = 79.7 bits (195), Expect = 7e-14
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 247 KEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPF 285
>tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 303
Score = 79.7 bits (195), Expect = 7e-14
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 247 KEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPF 285
>tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 303
Score = 79.7 bits (195), Expect = 7e-14
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 247 KEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPF 285
>tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_61, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00031964001 PE=4 SV=1
Length = 290
Score = 79.0 bits (193), Expect = 1e-13
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMF+MLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 234 KEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPF 272
>tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26
OS=Nicotiana tabacum GN=Lhcb5 PE=2 SV=1
Length = 285
Score = 78.6 bits (192), Expect = 2e-13
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMF+MLGFF+QAYVTG+GPVENLAAHLSDPF
Sbjct: 229 KEIKNGRLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPF 267
>tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_52279 PE=4 SV=1
Length = 227
Score = 78.6 bits (192), Expect = 2e-13
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENL+AHLSDPF
Sbjct: 171 KEIKNGRLAMFSMLGFFVQAYVTGEGPVENLSAHLSDPF 209
>tr|B7SAW2|B7SAW2_9POAL Chloroplast chlorophyll a/b binding protein
cab-PhE9 OS=Phyllostachys edulis PE=2 SV=1
Length = 283
Score = 78.2 bits (191), Expect = 2e-13
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -3
Query: 142 KEIKNGRLAMFSMLGFFLQAYVTGQGPVENLAAHLSDPF 26
KEIKNGRLAMFSMLGFF+QAYVTG+GPVENLA HLSDPF
Sbjct: 227 KEIKNGRLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPF 265
|