BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915117|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F10.
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 O...    30   7.0  
sp|Q63DX9|ILVC1_BACCZ Ketol-acid reductoisomerase 1 OS=Bacillus ...    30   7.1  
sp|Q73BA1|ILVC1_BACC1 Ketol-acid reductoisomerase 1 OS=Bacillus ...    30   7.1  
sp|A2R2E3|TOF1_ASPNC Topoisomerase 1-associated factor 1 OS=Aspe...    30   9.1  
sp|Q6HLF4|ILVC1_BACHK Ketol-acid reductoisomerase 1 OS=Bacillus ...    30   9.2  

>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3
            OS=Homo sapiens GN=NOTCH3 PE=1 SV=1
          Length = 2321

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 24/94 (25%), Positives = 37/94 (39%)
 Frame = -2

Query: 341  HPLCSAYTCSPRAKSPM*GSEHQRKTASKSSRD*RHFQWPHWLSSYPPSVKTKSMXXXXX 162
            +P+  A++  P+A+     SEH   T S  S +       HW S  PPS+   S      
Sbjct: 2221 YPVAGAHSSPPKARFLRVPSEHPYLTPSPESPE-------HWASPSPPSLSDWS----ES 2269

Query: 161  XXXXXXXXXXXXXXXXPILVRPLPLKIPRSKSKA 60
                             +  +PLPL +P S ++A
Sbjct: 2270 TPSPATATGAMATTTGALPAQPLPLSVPSSLAQA 2303


>sp|Q63DX9|ILVC1_BACCZ Ketol-acid reductoisomerase 1 OS=Bacillus
           cereus (strain ZK / E33L) GN=ilvC1 PE=3 SV=1
          Length = 336

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -1

Query: 273 KEDGFKVFSGLEAFSMASLA-LFLPSICKNKVHAVRSAPTMRIGLLPLGDAFARTHPGET 97
           KEDGF V++  EA   A +  + LP   + +V+    AP ++ G   +       H  + 
Sbjct: 57  KEDGFSVYTVAEAAKQADVVMILLPDELQPEVYEAEIAPNLQAGNSLVFAHGFNVHFDQV 116

Query: 96  SPP*NPKV 73
            PP N  V
Sbjct: 117 KPPANVDV 124


>sp|Q73BA1|ILVC1_BACC1 Ketol-acid reductoisomerase 1 OS=Bacillus
           cereus (strain ATCC 10987) GN=ilvC1 PE=3 SV=1
          Length = 336

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -1

Query: 273 KEDGFKVFSGLEAFSMASLA-LFLPSICKNKVHAVRSAPTMRIGLLPLGDAFARTHPGET 97
           KEDGF V++  EA   A +  + LP   + +V+    AP ++ G   +       H  + 
Sbjct: 57  KEDGFSVYTVAEAAKQADVVMILLPDELQPEVYEAEIAPNLQAGNSLVFAHGFNVHFDQV 116

Query: 96  SPP*NPKV 73
            PP N  V
Sbjct: 117 KPPANVDV 124


>sp|A2R2E3|TOF1_ASPNC Topoisomerase 1-associated factor 1
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=tof1 PE=3 SV=2
          Length = 1169

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +2

Query: 173 TAWTLFLQMEGKKRANEAIENASS--PEKTLKPSSFGV 280
           TAW  FL+ E  +RA +  ++A S  P K L+P SFG+
Sbjct: 415 TAW--FLEAERARRARQRKKHAESEKPAKELEPDSFGL 450


>sp|Q6HLF4|ILVC1_BACHK Ketol-acid reductoisomerase 1 OS=Bacillus
           thuringiensis subsp. konkukian GN=ilvC1 PE=3 SV=1
          Length = 336

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -1

Query: 273 KEDGFKVFSGLEAFSMASLA-LFLPSICKNKVHAVRSAPTMRIGLLPLGDAFARTHPGET 97
           KEDGF V++  EA   A +  + LP   + +V+    AP ++ G   +       H  + 
Sbjct: 57  KEDGFSVYTVAEAAKKADVVMILLPDELQPEVYEAEIAPNLQAGNSLVFAHGFNVHFDQV 116

Query: 96  SPP*NPKV 73
            PP N  V
Sbjct: 117 KPPVNVDV 124

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915117|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F10.
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2WGY6|B2WGY6_PYRTR Cell morphogenesis protein (PAG1) OS=Pyre...    35   2.3  
tr|A7RA76|A7RA76_STRGR Cholesterol oxidase OS=Streptomyces grise...    34   5.1  
tr|B2UCR5|B2UCR5_RALPJ Putative uncharacterized protein OS=Ralst...    33   8.6  
tr|A3V1A8|A3V1A8_9RHOB Possible ornithine cyclodeaminase OS=Lokt...    27   9.4  

>tr|B2WGY6|B2WGY6_PYRTR Cell morphogenesis protein (PAG1)
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_09192 PE=4 SV=1
          Length = 2557

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +2

Query: 122 KASPRGRSPILMVGALLTAWTLFLQMEGKKRANEAIENASSPEKTL-----KPSSFGVHS 286
           K+SP  R P    G  LTA +  +    +  A +   + SSP++T      KPS    H+
Sbjct: 58  KSSPTSREPSQTRGRALTASSRSIASRSQTPAAKGASSNSSPDRTFHSLERKPSGSYAHN 117

Query: 287 LTLEILHGVNMYRQS 331
               I+HG+   R +
Sbjct: 118 RNTSIVHGIQHSRNT 132


>tr|A7RA76|A7RA76_STRGR Cholesterol oxidase OS=Streptomyces griseus
           GN=choG PE=4 SV=1
          Length = 552

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +2

Query: 242 SPEKTLKPSSFGVHSLTLEILHGVNMYRQSKADDGYVMQVD 364
           S +KT   ++ G   +T+E LH V   RQ K D GYV+ VD
Sbjct: 270 SLDKTYLAAALGTGKVTIETLHQVKAIRQQK-DGGYVLSVD 309


>tr|B2UCR5|B2UCR5_RALPJ Putative uncharacterized protein
           OS=Ralstonia pickettii (strain 12J) GN=Rpic_1578 PE=4
           SV=1
          Length = 356

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
 Frame = +2

Query: 14  WSCAACQEISALIFL*L*IWTLGF*G--GEVSPGWVLAKASPRGRSPILMVGALLTAWTL 187
           WSCA  Q           +W + +    GE+   W++  A   G   +      L    L
Sbjct: 4   WSCAKTQ-----------LWPIRYKPIPGELLSSWIVRLAHGHGMGVMPFCNVALGPMAL 52

Query: 188 FLQMEGKKRANEAIENASSPEKTLKPSSFGVHSLTLEILHGVNMYRQ 328
            L M+  +R+ E++  A +      P +  VH  TL +  GV +YRQ
Sbjct: 53  QLTMDIDRRSRESLLKALALHTGTHPDA--VHQATLRVYEGV-LYRQ 96


>tr|A3V1A8|A3V1A8_9RHOB Possible ornithine cyclodeaminase
           OS=Loktanella vestfoldensis SKA53 GN=SKA53_09899 PE=4
           SV=1
          Length = 321

 Score = 26.9 bits (58), Expect(2) = 9.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 328 LPIHVHPVQNLQCKGVNTKGRR 263
           L IHV P  ++ C G +TKG++
Sbjct: 206 LDIHVRPGTHIACMGTDTKGKQ 227



 Score = 24.6 bits (52), Expect(2) = 9.4
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 243 LEAFSMASLALFLPSICK-----NKVHAVRSAPTMRIGLLPLGDAFARTHPGETSP 91
           LEA  +A   +F   + +        HA+ +    +  +  +G     THPG TSP
Sbjct: 229 LEAAVLARATVFTDEVAQAVTIGEAQHAIAAGLITQDAIHEMGAVVNGTHPGRTSP 284