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NBDC - LSDB Archive
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BP915118
Clone id YMU001_000066_F11
Library
Length 356
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGACTTCTGCCTGCGCTCCTTCTCTTTGTTAACTCTTTTTCGCAGTTCTTTATCTTTTG
CAAAATTCGGACCCTCTCCTCCTTGAGCTTCAATGTTTCAGGATGCTTCTTGTCCAGCTC
ACTTTTCTTTTTGGCAATTCTCTTGTCACAAAGCAGAGCTTCCTTTGTAAACACAGATTG
CTCTTTCTTCTTCTCCTTTACTTCATTCTCCAGCTGCTCCTGAGCCAGATTAGCGTCTGC
AAGGCTTGCCTTCTCAGTTTCCAGCTCTGCTTGGATTCTCTCAATGTCCCTCTCAGTATT
GTACATTTGCCAGAGAAAATACTCGGTTTTCAAGGCTTTCAGTTCACCCTGAAGTC
■■Homology search results ■■ -
sp_hit_id Q9Z1M9
Definition sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus
Align length 112
Score (bit) 65.9
E-value 6.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915118|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F11.
         (356 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protei...    66   6e-11
sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes prot...    64   2e-10
sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes prot...    64   2e-10
sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes prot...    64   2e-10
sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes prot...    60   3e-09
sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes prot...    55   1e-07
sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes prot...    51   2e-06
sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair ra...    44   2e-04
sp|A3LYI0|NST1_PICST Stress response protein NST1 OS=Pichia stip...    43   6e-04
sp|P26044|RADI_PIG Radixin OS=Sus scrofa GN=RDX PE=2 SV=1              42   7e-04
sp|P35241|RADI_HUMAN Radixin OS=Homo sapiens GN=RDX PE=1 SV=1          42   7e-04
sp|P58301|RAD50_PYRFU DNA double-strand break repair rad50 ATPas...    42   7e-04
sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta ...    42   7e-04
sp|Q9PU45|RADI_CHICK Radixin OS=Gallus gallus GN=RDX PE=2 SV=1         42   0.001
sp|Q32LP2|RADI_BOVIN Radixin OS=Bos taurus GN=RDX PE=2 SV=1            42   0.001
sp|Q5RDH2|CT2NL_PONAB CTTNBP2 N-terminal-like protein OS=Pongo a...    42   0.001
sp|Q9P2B4|CT2NL_HUMAN CTTNBP2 N-terminal-like protein OS=Homo sa...    42   0.001
sp|Q7TT49|MRCKB_RAT Serine/threonine-protein kinase MRCK beta OS...    41   0.002
sp|P32908|SMC1_YEAST Structural maintenance of chromosomes prote...    40   0.004
sp|Q91VW5|GOGA4_MOUSE Golgin subfamily A member 4 OS=Mus musculu...    40   0.004
sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4    40   0.005
sp|A1ST45|IF2_PSYIN Translation initiation factor IF-2 OS=Psychr...    40   0.005
sp|Q9D180|YA046_MOUSE Uncharacterized protein ENSP00000361571 ho...    39   0.006
sp|Q99LJ0|CT2NL_MOUSE CTTNBP2 N-terminal-like protein OS=Mus mus...    39   0.006
sp|Q6BUT3|NST1_DEBHA Stress response protein NST1 OS=Debaryomyce...    39   0.008
sp|Q811U3|RB6I2_RAT ELKS/RAB6-interacting/CAST family member 1 O...    38   0.014
sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1...    38   0.014
sp|Q805A1|SMC5_XENLA Structural maintenance of chromosomes prote...    38   0.018
sp|Q9FF41|PMI15_ARATH Protein PLASTID MOVEMENT IMPAIRED 15 OS=Ar...    38   0.018
sp|Q55FW7|GLE1_DICDI Nucleoporin GLE1 OS=Dictyostelium discoideu...    38   0.018

>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein
           1A OS=Rattus norvegicus GN=Smc1a PE=1 SV=1
          Length = 1233

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 33/112 (29%), Positives = 65/112 (58%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           L+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++E+E+KEKKKE  
Sbjct: 212 LKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELG 271

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRR 19
              +E    +K I +K SEL++K P+ +K KE     ++K++  +K L  R+
Sbjct: 272 KMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNRQ 323



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
 Frame = -3

Query: 303 YNTERDI--ERIQAELETEKA----SLADANL-AQEQLE------NEVKEKKKEQSVFTK 163
           Y+ +++I  ER +A+ E E+A    +L D  + AQ QL+      NEV+ +K  + + +K
Sbjct: 186 YHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASK 245

Query: 162 EALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRS 16
                +K I K K  +DK   E  + K+E  +++++ +  EKE+ ++ S
Sbjct: 246 -----NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDS 289


>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein
           1A OS=Mus musculus GN=Smc1a PE=1 SV=3
          Length = 1233

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 32/108 (29%), Positives = 63/108 (58%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           L+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++E+E+KEKKKE  
Sbjct: 212 LKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELG 271

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
              +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 272 KMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
 Frame = -3

Query: 303 YNTERDI--ERIQAELETEKAS----LADANL-AQEQLE------NEVKEKKKEQSVFTK 163
           Y+ +++I  ER +A+ E E+A     L D  + AQ QL+      NEV+ +K  + + +K
Sbjct: 186 YHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASK 245

Query: 162 EALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRS 16
                +K I K K  +DK   E  + K+E  +++++ +  EKE+ ++ S
Sbjct: 246 -----NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDS 289


>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein
           1A OS=Homo sapiens GN=SMC1A PE=1 SV=2
          Length = 1233

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 32/108 (29%), Positives = 63/108 (58%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           L+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++E+E+KEKKKE  
Sbjct: 212 LKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELG 271

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
              +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 272 KMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
 Frame = -3

Query: 303 YNTERDI--ERIQAELETEKAS----LADANL-AQEQLE------NEVKEKKKEQSVFTK 163
           Y+ +++I  ER +A+ E E+A     L D  + AQ QL+      NEV+ +K  + + +K
Sbjct: 186 YHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASK 245

Query: 162 EALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRS 16
                +K I K K  +DK   E  + K+E  +++++ +  EKE+ ++ S
Sbjct: 246 -----NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDS 289


>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein
           1A OS=Bos taurus GN=SMC1A PE=1 SV=1
          Length = 1233

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 32/108 (29%), Positives = 63/108 (58%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           L+ E+   + +  L+++Y+ E +IE++  EL ++   +       +++E+E+KEKKKE  
Sbjct: 212 LKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELG 271

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKEL 31
              +E    +K I +K SEL++K P+ +K KE     ++K++  +K L
Sbjct: 272 KMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
 Frame = -3

Query: 303 YNTERDI--ERIQAELETEKAS----LADANL-AQEQLE------NEVKEKKKEQSVFTK 163
           Y+ +++I  ER +A+ E E+A     L D  + AQ QL+      NEV+ +K  + + +K
Sbjct: 186 YHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASK 245

Query: 162 EALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRS 16
                +K I K K  +DK   E  + K+E  +++++ +  EKE+ ++ S
Sbjct: 246 -----NKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDS 289


>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein
           1A OS=Xenopus laevis GN=smc1a PE=1 SV=1
          Length = 1232

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 32/120 (26%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           L+ E+   + +  L+++Y+ E +IE++  EL  +   +       +++E E+K+KKKE  
Sbjct: 212 LKDEVARAQIQLQLFKLYHNESEIEKLNKELSVKNKGIEKDKKHMDKVEEELKDKKKELG 271

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQK-------IKNCEKELTKRRS 16
              +E    +K I +K +EL++K P+ +K KE     ++K       ++N +K+  KR++
Sbjct: 272 KMMREQQAIEKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKA 331


>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein
           1B OS=Homo sapiens GN=SMC1B PE=1 SV=2
          Length = 1235

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
 Frame = -3

Query: 345 ELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQSVFT 166
           ELK  K +  L+Q+Y+ E+ I  +  +LE     L+    +    EN VK +KKE  + T
Sbjct: 215 ELKMNKIQLQLFQLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKEHGMLT 274

Query: 165 KEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQK-------IKNCEKELTKR 22
           ++    +K +   ++ L++K P+ +K KE     L+K       IK+ EK+ +K+
Sbjct: 275 RQLQQTEKELKSVETLLNQKRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQ 329


>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein
           1B OS=Mus musculus GN=Smc1b PE=1 SV=1
          Length = 1248

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%)
 Frame = -3

Query: 345 ELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQSVFT 166
           ELK  K +  L+Q+Y  E  I  +  ELE    +L+         EN  K KKK+  + T
Sbjct: 215 ELKINKIQLMLFQLYYNEEKINVLNTELEQMDGNLSVVKDTLSHHENIFKAKKKDYGMLT 274

Query: 165 KEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELT 28
           ++     K +   ++ L++K P+ +K KE     L+K+   +K +T
Sbjct: 275 RQLQQTAKELKSVEAILNQKRPQYIKAKENTSHHLKKLDLSKKLIT 320


>sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair rad50
           ATPase OS=Aquifex aeolicus GN=rad50 PE=3 SV=1
          Length = 978

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQ--EQLENEVKEKKKE 181
           L+ EL  + T+  L ++ N E+++E+++ +LE  +       +A+  E+++ ++ E K  
Sbjct: 239 LERELSQVVTK--LKELENLEKEVEKLREKLEFSRKVAPYVPIAKRIEEIDKKLTELKVR 296

Query: 180 QSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEE---------RVRILQKIKNCEKELT 28
           ++  TKE  +    ++  + EL++   E  K KEE         R++ LQ+IK   KEL+
Sbjct: 297 KNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEEKEREKELEHRLKKLQEIKEILKELS 356

Query: 27  KRRSA 13
           +  S+
Sbjct: 357 QLSSS 361


>sp|A3LYI0|NST1_PICST Stress response protein NST1 OS=Pichia
           stipitis GN=NST1 PE=3 SV=2
          Length = 1234

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
 Frame = -3

Query: 297 TERDIERIQAE----LETEKASLADANLAQE-----QLENEVKEKKKEQSVFTKEALLCD 145
           T++ IE ++AE     E E   L     A+E     QL  E ++KKKE+    KE  L  
Sbjct: 641 TQKLIEELEAEENAKKERELKKLKQKEKAKEKKRLQQLAKEEEKKKKEEEQRAKEEELKQ 700

Query: 144 KRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSA 13
           K+ A K  +  +K    LK +EE+ + ++++K  E+E  K+  A
Sbjct: 701 KQEALKADQRRRKEEAKLKREEEKKKRIEELKRKEEEHKKKVEA 744



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
 Frame = -3

Query: 294 ERDIERI-QAELETEKASLADANLAQEQLENEVKEKKKEQSVFTK-EALLCDKRIAK--- 130
           ER+++++ Q E   EK  L      +E+ + E +++ KE+ +  K EAL  D+R  K   
Sbjct: 657 ERELKKLKQKEKAKEKKRLQQLAKEEEKKKKEEEQRAKEEELKQKQEALKADQRRRKEEA 716

Query: 129 --KKSELDKKHPETLKLKEE----RVRILQKIKNCEKELTKRR 19
             K+ E  KK  E LK KEE    +V   QK +   K+L + R
Sbjct: 717 KLKREEEKKKRIEELKRKEEEHKKKVEAQQKKEEEAKKLKEER 759



 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = -3

Query: 261 ETEKASLADANLAQEQLENEVK--EKKKEQSVFTKEALLCDKRIAKKKSELDKKHPETLK 88
           E +K  + +    +E+ + +V+  +KK+E++   KE         +KK E +K+  E LK
Sbjct: 722 EEKKKRIEELKRKEEEHKKKVEAQQKKEEEAKKLKEERKKKAEEERKKKEEEKRQKELLK 781

Query: 87  LKEERVRILQKIKNCEKE 34
            ++E  R   K++  E E
Sbjct: 782 KQKEEERERLKLEAEENE 799



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
 Frame = -3

Query: 354  LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEK----- 190
            L+ + +  K E  L +    ++ IE ++ + E  K  + +A   +E+   ++KE+     
Sbjct: 705  LKADQRRRKEEAKLKREEEKKKRIEELKRKEEEHKKKV-EAQQKKEEEAKKLKEERKKKA 763

Query: 189  -----KKEQSVFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKN 46
                 KKE+    KE L   K   +++ +L+ +  E L+ +++ ++ LQ+ +N
Sbjct: 764  EEERKKKEEEKRQKELLKKQKEEERERLKLEAEENERLEKEQQELQELQESQN 816


>sp|P26044|RADI_PIG Radixin OS=Sus scrofa GN=RDX PE=2 SV=1
          Length = 583

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = -3

Query: 279 RIQAELETEKASLADANLAQEQLENEVKEKKKEQSVFTKEALL-----CDKRIAKKKSEL 115
           + QA  E  +  L  A L  E+ + E+ EK+KE+    KE L+      +++  K + EL
Sbjct: 306 KAQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLRQIEEQTMKAQKEL 365

Query: 114 DKKHPETLKLKEERVRILQKIKNCEKELTKRRSA 13
           +++  + L+L +ER R  ++ +  EKE   RR+A
Sbjct: 366 EEQTRKALELDQERKRAKEEAERLEKE---RRAA 396
tr_hit_id A9SLI2
Definition tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1 OS=Physcomitrella patens subsp. patens
Align length 122
Score (bit) 125.0
E-value 8.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915118|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_F11.
         (356 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1 OS=Physc...   125   8e-28
tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containin...   118   1e-25
tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza...   118   1e-25
tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza...   118   1e-25
tr|B4FN08|B4FN08_MAIZE Putative uncharacterized protein OS=Zea m...   117   3e-25
tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2...   110   5e-23
tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome...   108   2e-22
tr|A5C6Z2|A5C6Z2_VITVI Putative uncharacterized protein OS=Vitis...   104   3e-21
tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1 p...    97   3e-19
tr|Q0WSY5|Q0WSY5_ARATH Structural maintenance of chromosomes (SM...    96   1e-18
tr|Q9M1T3|Q9M1T3_ARATH Structural maintenance of chromosomes (SM...    91   4e-17
tr|A7RFF3|A7RFF3_NEMVE Predicted protein OS=Nematostella vectens...    67   3e-10
tr|B4K7D0|B4K7D0_DROMO GI24164 OS=Drosophila mojavensis GN=GI241...    67   5e-10
tr|B4JIH2|B4JIH2_DROGR GH18490 OS=Drosophila grimshawi GN=GH1849...    67   5e-10
tr|B4MBZ5|B4MBZ5_DROVI GJ14197 OS=Drosophila virilis GN=GJ14197 ...    66   8e-10
tr|B0WY22|B0WY22_CULQU Structural maintenance of chromosomes pro...    66   1e-09
tr|Q178Q7|Q178Q7_AEDAE Structural maintenance of chromosomes smc...    65   1e-09
tr|A2AFQ5|A2AFQ5_MOUSE Structural maintenance of chromosomes 1A ...    64   4e-09
tr|A0JLM6|A0JLM6_MOUSE Smc1a protein (Fragment) OS=Mus musculus ...    64   4e-09
tr|Q6P2R1|Q6P2R1_HUMAN SMC1A protein (Fragment) OS=Homo sapiens ...    64   4e-09
tr|Q6MZR8|Q6MZR8_HUMAN Putative uncharacterized protein DKFZp686...    64   4e-09
tr|Q68EN4|Q68EN4_HUMAN SMC1A protein (Fragment) OS=Homo sapiens ...    64   4e-09
tr|A8K7A6|A8K7A6_HUMAN cDNA FLJ77162, highly similar to Homo sap...    64   4e-09
tr|Q9VCD8|Q9VCD8_DROME SMC1 OS=Drosophila melanogaster GN=SMC1 P...    64   5e-09
tr|Q9N6I4|Q9N6I4_DROME SMC1 protein (Cohesin subunit) OS=Drosoph...    64   5e-09
tr|B4QSF7|B4QSF7_DROSI GD21061 OS=Drosophila simulans GN=GD21061...    64   5e-09
tr|B4HGH3|B4HGH3_DROSE GM26555 OS=Drosophila sechellia GN=GM2655...    64   5e-09
tr|B3P7A0|B3P7A0_DROER GG11251 OS=Drosophila erecta GN=GG11251 P...    63   7e-09
tr|B4PL25|B4PL25_DROYA GE23444 OS=Drosophila yakuba GN=GE23444 P...    63   9e-09
tr|B3MST3|B3MST3_DROAN GF23004 OS=Drosophila ananassae GN=GF2300...    62   1e-08

>tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1
           OS=Physcomitrella patens subsp. patens GN=CPC1502 PE=4
           SV=1
          Length = 1247

 Score =  125 bits (315), Expect = 8e-28
 Identities = 66/122 (54%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQGELK LKTEY LWQ++N E+D+    A+L+ E+A+L +    QEQLE E+K KK +Q+
Sbjct: 221 LQGELKELKTEYCLWQLFNIEKDVASTLAQLQRERATLQELYHEQEQLEAEIKAKKMDQA 280

Query: 174 VFTKEALLCDKRIAKKKSELDKK------HPETLKLKEERVRILQKIKNCEKELTKRRSA 13
           V  KE+LL DK+ +KKK ELDKK       PE LKLKEE  R+ QKI+NCEK+L K++  
Sbjct: 281 VLIKESLLLDKKSSKKKMELDKKVSCFCSAPELLKLKEEITRLSQKIRNCEKDLEKKKED 340

Query: 12  GR 7
            R
Sbjct: 341 KR 342


>tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containing
           protein, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g44390 PE=4 SV=2
          Length = 573

 Score =  118 bits (296), Expect = 1e-25
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       +  + E+  KKKEQS
Sbjct: 228 LQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQS 287

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE+ K++   + H
Sbjct: 288 GFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKH 345


>tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_39293 PE=4 SV=1
          Length = 1246

 Score =  118 bits (296), Expect = 1e-25
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       +  + E+  KKKEQS
Sbjct: 228 LQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQS 287

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE+ K++   + H
Sbjct: 288 GFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKH 345


>tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_035587 PE=4 SV=1
          Length = 1224

 Score =  118 bits (296), Expect = 1e-25
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       +  + E+  KKKEQS
Sbjct: 228 LQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQS 287

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            F K+  LC+K IAKKK ELDKK PE L+LKE+  R+  KIK+C KE+ K++   + H
Sbjct: 288 GFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKH 345


>tr|B4FN08|B4FN08_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 395

 Score =  117 bits (293), Expect = 3e-25
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK LKTE++LWQ+Y  E+DIE+I+AEL  ++ SL          + E+  KKKEQS
Sbjct: 233 LQQDLKLLKTEHYLWQLYTIEKDIEKIEAELVEDRESLQQVQEENRSSDYELTAKKKEQS 292

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            F K+  L +K I KKK ELDKK PE LKLKE+  R+  KIK+C+KE+ K++   + H
Sbjct: 293 AFLKKITLSEKSITKKKLELDKKQPELLKLKEQISRLKSKIKSCKKEIDKKKDDHKKH 350


>tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2
           SV=1
          Length = 1264

 Score =  110 bits (274), Expect = 5e-23
 Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK  KTE+ LWQ+Y  E+D E+I+AELE ++ SL       +  + E+  KKKEQS
Sbjct: 228 LQQDLKLAKTEHLLWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQS 287

Query: 174 VFTKEALLCDKRIAKKKSELDKK--------HPETLKLKEERVRILQKIKNCEKELTKRR 19
            F K+  LC+K IAKKK ELDK+         PE L+LKE+  R+  KIK+C KE+ K++
Sbjct: 288 GFLKKMTLCEKSIAKKKLELDKRVSLMWAVVQPELLRLKEQISRLKSKIKSCNKEIDKKK 347

Query: 18  SAGRSH 1
              + H
Sbjct: 348 DDSKKH 353


>tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028583001
           PE=4 SV=1
          Length = 1205

 Score =  108 bits (269), Expect = 2e-22
 Identities = 56/118 (47%), Positives = 74/118 (62%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ +LK+LK E+FLW++ N E+DI +I  +LE E  S  D    QE  E E  + KKEQ+
Sbjct: 221 LQEQLKSLKKEHFLWKLLNIEKDIAKINEDLEAENKSREDVIQEQESCEREASKAKKEQA 280

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            + KE    +K+I+ K ++LDK  PE LKLKEE  RI  KIK+  KEL K+R   R H
Sbjct: 281 KYLKEITQFEKKISDKNNKLDKNQPELLKLKEEMSRINSKIKSSRKELDKKREERRKH 338


>tr|A5C6Z2|A5C6Z2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015634 PE=4 SV=1
          Length = 451

 Score =  104 bits (259), Expect = 3e-21
 Identities = 53/113 (46%), Positives = 70/113 (61%)
 Frame = -3

Query: 339 KALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQSVFTKE 160
           K+LK E+FLW++ N E+DI +I  +LE E  S  D    QE  E E  + KKEQ+ + KE
Sbjct: 12  KSLKKEHFLWKLLNIEKDIAKINEDLEAENKSREDVTQEQESCEREASKAKKEQAKYLKE 71

Query: 159 ALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
               +K+I+ K ++LDK  PE LKLKEE  RI  KIK+  KEL K+R   R H
Sbjct: 72  ITQFEKKISDKNNKLDKNQPELLKLKEEMSRINSKIKSSRKELDKKREERRKH 124


>tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1
           protein OS=Arabidopsis thaliana GN=SMC1 PE=2 SV=1
          Length = 1218

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ ELKALK E FLWQ+YN E DIE+   ++++EK++  D     E+ E E  ++K EQ+
Sbjct: 222 LQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKRKVEQA 281

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKRRSAGRSH 1
            + KE    +K+IA+K S+L K  PE L+ KEE  RI  KI+   K++ KR+     H
Sbjct: 282 KYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEKGKH 339


>tr|Q0WSY5|Q0WSY5_ARATH Structural maintenance of chromosomes
           (SMC)-like protein (Fragment) OS=Arabidopsis thaliana
           GN=At3g54670 PE=2 SV=1
          Length = 332

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 50/111 (45%), Positives = 71/111 (63%)
 Frame = -3

Query: 354 LQGELKALKTEYFLWQMYNTERDIERIQAELETEKASLADANLAQEQLENEVKEKKKEQS 175
           LQ ELKALK E FLWQ+YN E DIE+   ++++EK++  D     E+ E E  ++K EQ+
Sbjct: 222 LQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKRKVEQA 281

Query: 174 VFTKEALLCDKRIAKKKSELDKKHPETLKLKEERVRILQKIKNCEKELTKR 22
            + KE    +K+IA+K S+L K  PE L+ KEE  RI  KI+   K++ KR
Sbjct: 282 KYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKR 332