BP915126
Clone id YMU001_000066_G10
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCACAAATAGCTGCTTGTCTTCTGCTAATTTATATCTAAACACACAACTTATATGTCATA
TCTTATCTATTGAAGGCTTGCACAATCAATGTTTGATGACCTTGCTTTCAATCCATTTCA
GCAGAAACCTTGTAATCTGTTGAAGGCTGGCAGTCAATCCTCGATGCACTAATTCTTTGC
AAATCCATTTTTAGCAGAAATTATTCCTGCATATGATCTTCATTGATTTGTTCATGTGTA
TATGCCAGCGAACAAACCTTCTTCATAAACTGCACCTGCAAATGCGCAGAGTGGCTCATT
CTTGATTGCAATGGGCAGGTGCAGACGACATCCTCACCATATAGTGGTGGGCATATGTGC
TTTTTGCCTCTCTGAGCAGCTGTCTTCCTTGCTTGTGAGAGAGGATGATGATGGAACAGA
CCTCTATGCCCACTTACACACACATCCCAATCTGCACTCTCCCTTTGCTTTCACCCCACC
ATCATGAGTACCTGCAGGTAATATCTCAAGGGCGAA
■■Homology search results ■■ -
sp_hit_id Q9UTB4
Definition sp|Q9UTB4|MSS51_SCHPO Protein mss51 OS=Schizosaccharomyces pombe
Align length 70
Score (bit) 31.6
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915126|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_G10.
(516 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UTB4|MSS51_SCHPO Protein mss51 OS=Schizosaccharomyces pombe... 32 2.3
sp|O60711|LPXN_HUMAN Leupaxin OS=Homo sapiens GN=LPXN PE=1 SV=1 31 3.9
sp|Q4KC82|ARNA_PSEF5 Bifunctional polymyxin resistance protein a... 31 3.9
sp|Q053M2|DXS_LEPBL 1-deoxy-D-xylulose-5-phosphate synthase OS=L... 30 5.1
sp|Q04U59|DXS_LEPBJ 1-deoxy-D-xylulose-5-phosphate synthase OS=L... 30 5.1
sp|Q9SS80|U503A_ARATH UPF0503 protein At3g09070, chloroplastic O... 30 8.7

>sp|Q9UTB4|MSS51_SCHPO Protein mss51 OS=Schizosaccharomyces pombe
GN=mss51 PE=2 SV=1
Length = 378

Score = 31.6 bits (70), Expect = 2.3
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -2

Query: 407 HPLSQARKTAAQRGKKHI-----CPPLYGEDVVCTCPLQSRMSHSAHLQVQFMKKVCSLA 243
HPLS++ TA +R +HI C P+ G+ V CP +H + K SL
Sbjct: 19 HPLSRSPLTALRRRSEHIKQVYRC-PISGKSVEYECPESGFPTHCNRTHWEQDKIHQSLI 77

Query: 242 YTHEQINEDH 213
QINED+
Sbjct: 78 PKLRQINEDY 87


>sp|O60711|LPXN_HUMAN Leupaxin OS=Homo sapiens GN=LPXN PE=1 SV=1
Length = 386

Score = 30.8 bits (68), Expect = 3.9
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2

Query: 290 SGSFLIAMGRCRRHPHHIVVGICAFCLSEQLSSLLVREDDDGT 418
+G + AMG + HP H V CAFCL+ QLS + RE +D T
Sbjct: 337 TGRCISAMGY-KFHPEHFV---CAFCLT-QLSKGIFREQNDKT 374


>sp|Q4KC82|ARNA_PSEF5 Bifunctional polymyxin resistance protein arnA
OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
GN=arnA PE=3 SV=1
Length = 668

Score = 30.8 bits (68), Expect = 3.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +2

Query: 314 GRCRRHPHHIVVGICAFCLSEQLSSLLVRED-------DDGTDLYAHLHTHPNLH 457
GR R +++G+ F + LS L+R+D D G+D L +HPN H
Sbjct: 313 GRKPRRTRVLILGVNGF-IGNHLSERLLRDDKYDVYGLDIGSDAIERLRSHPNFH 366


>sp|Q053M2|DXS_LEPBL 1-deoxy-D-xylulose-5-phosphate synthase
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain L550) GN=dxs PE=3 SV=1
Length = 635

Score = 30.4 bits (67), Expect = 5.1
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -2

Query: 476 G*KQRESADWDVCVSGHRGLFHHHPLSQARKTAAQRGKKHICPPLYGEDVVCTCPLQSRM 297
G +RE + +D+ +GH G L +A +G+ + + G+ + T M
Sbjct: 103 GFPKREESPYDLYNTGHAGTSISQALGEAAARDLTKGEDYSVVAIIGDASIATGMALEAM 162

Query: 296 SHSAHLQ 276
+H+ HL+
Sbjct: 163 NHAGHLK 169


>sp|Q04U59|DXS_LEPBJ 1-deoxy-D-xylulose-5-phosphate synthase
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=dxs PE=3 SV=1
Length = 635

Score = 30.4 bits (67), Expect = 5.1
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -2

Query: 476 G*KQRESADWDVCVSGHRGLFHHHPLSQARKTAAQRGKKHICPPLYGEDVVCTCPLQSRM 297
G +RE + +D+ +GH G L +A +G+ + + G+ + T M
Sbjct: 103 GFPKREESPYDLYNTGHAGTSISQALGEAAARDLTKGEDYSVVAIIGDASIATGMALEAM 162

Query: 296 SHSAHLQ 276
+H+ HL+
Sbjct: 163 NHAGHLK 169


>sp|Q9SS80|U503A_ARATH UPF0503 protein At3g09070, chloroplastic
OS=Arabidopsis thaliana GN=At3g09070 PE=1 SV=1
Length = 685

Score = 29.6 bits (65), Expect = 8.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2

Query: 320 CRRHPHHIVVGICAFCLSEQLSSL 391
C RHP G C CL E+LS L
Sbjct: 31 CNRHPEERFTGFCPSCLCERLSVL 54


tr_hit_id A9SAM2
Definition tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 39.3
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915126|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_G10.
(516 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.12
tr|A9RF80|A9RF80_PHYPA Predicted protein (Fragment) OS=Physcomit... 38 0.26
tr|B6SJR9|B6SJR9_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.75
tr|Q8H086|Q8H086_ORYSJ Putative uncharacterized protein OSJNBb00... 36 1.3
tr|Q69QA5|Q69QA5_ORYSJ Os06g0218800 protein OS=Oryza sativa subs... 36 1.3
tr|Q0DV57|Q0DV57_ORYSJ Os03g0148400 protein (Fragment) OS=Oryza ... 36 1.3
tr|B8B407|B8B407_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.3
tr|A3B9Q0|A3B9Q0_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.3
tr|Q8S7E3|Q8S7E3_ORYSA Putative uncharacterized protein OSJNBa00... 35 2.9
tr|Q7XC01|Q7XC01_ORYSJ Os10g0567600 protein OS=Oryza sativa subs... 35 2.9
tr|A7P2X9|A7P2X9_VITVI Chromosome chr1 scaffold_5, whole genome ... 35 2.9
tr|A3C7G0|A3C7G0_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.9
tr|A2ZAD5|A2ZAD5_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.9
tr|A7NVD2|A7NVD2_VITVI Chromosome chr18 scaffold_1, whole genome... 34 3.7
tr|B6TIQ0|B6TIQ0_MAIZE Putative uncharacterized protein OS=Zea m... 33 6.4

>tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163837 PE=4 SV=1
Length = 528

Score = 39.3 bits (90), Expect = 0.12
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2

Query: 320 CRRHPHHIVVGICAFCLSEQLSSLLVRED--DDGTDLYAHLHTHPNLHSPFAFTPPS*VP 493
C+ HP VG+CA CL E LS L V +D DD DL F + PS +P
Sbjct: 6 CKWHPSQDNVGVCAHCLRESLSRLAVYQDEEDDSVDL-----------EVFPPSKPSAMP 54

Query: 494 AGN 502
AG+
Sbjct: 55 AGS 57


>tr|A9RF80|A9RF80_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_158743 PE=4 SV=1
Length = 505

Score = 38.1 bits (87), Expect = 0.26
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2

Query: 305 IAMGRCRRHPHHIVVGICAFCLSEQLSSLLV--REDDDGTDLYAHLHTHPNLHSPFAFTP 478
++M C+ HP VG+CA CL E LS L V E+DD DL F +
Sbjct: 1 MSMLGCKWHPSQDNVGVCAHCLRESLSRLAVCQDEEDDSIDL-----------EIFPPSK 49

Query: 479 PS*VPAGN 502
P+ +PAG+
Sbjct: 50 PTSIPAGS 57


>tr|B6SJR9|B6SJR9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 429

Score = 36.6 bits (83), Expect = 0.75
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2

Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391
RC RHP ++ GIC+ CL E+LSS+
Sbjct: 22 RCGRHPSQLLTGICSSCLMERLSSV 46


>tr|Q8H086|Q8H086_ORYSJ Putative uncharacterized protein
OSJNBb0050N02.5 (Putative uncharacterized protein)
(Expressed protein) OS=Oryza sativa subsp. japonica
GN=OSJNBb0050N02.5 PE=4 SV=1
Length = 445

Score = 35.8 bits (81), Expect = 1.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2

Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391
RC RHP + G+C+ CL E+LSS+
Sbjct: 35 RCGRHPSQVFTGVCSTCLMERLSSV 59


>tr|Q69QA5|Q69QA5_ORYSJ Os06g0218800 protein OS=Oryza sativa subsp.
japonica GN=P0644A02.33 PE=2 SV=1
Length = 181

Score = 35.8 bits (81), Expect = 1.3
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2

Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391
RCRRHP H G+C FCL ++LS L
Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39


>tr|Q0DV57|Q0DV57_ORYSJ Os03g0148400 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os03g0148400 PE=4 SV=1
Length = 442

Score = 35.8 bits (81), Expect = 1.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2

Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391
RC RHP + G+C+ CL E+LSS+
Sbjct: 32 RCGRHPSQVFTGVCSTCLMERLSSV 56


>tr|B8B407|B8B407_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22180 PE=4 SV=1
Length = 181

Score = 35.8 bits (81), Expect = 1.3
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2

Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391
RCRRHP H G+C FCL ++LS L
Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39


>tr|A3B9Q0|A3B9Q0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_019772 PE=4 SV=1
Length = 213

Score = 35.8 bits (81), Expect = 1.3
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2

Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391
RCRRHP H G+C FCL ++LS L
Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39


>tr|Q8S7E3|Q8S7E3_ORYSA Putative uncharacterized protein
OSJNBa0057L21.14 OS=Oryza sativa GN=OSJNBa0057L21.14
PE=4 SV=1
Length = 292

Score = 34.7 bits (78), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2

Query: 317 RCRRHPHHIVVGICAFCLSEQLSSLLVREDDDGTDLYAHLHTH 445
RC+ HP+ VG+CA CL ++L L + D A H H
Sbjct: 2 RCKLHPYANAVGVCAPCLRDRLLDLAAQRDAAADAAEADDHHH 44


>tr|Q7XC01|Q7XC01_ORYSJ Os10g0567600 protein OS=Oryza sativa subsp.
japonica GN=Os10g0567600 PE=4 SV=1
Length = 292

Score = 34.7 bits (78), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2

Query: 317 RCRRHPHHIVVGICAFCLSEQLSSLLVREDDDGTDLYAHLHTH 445
RC+ HP+ VG+CA CL ++L L + D A H H
Sbjct: 2 RCKLHPYANAVGVCAPCLRDRLLDLAAQRDAAADAAEADDHHH 44