BP915126 |
Clone id |
YMU001_000066_G10 |
Library |
YMU01 |
Length |
516 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000066_G10. |
Accession |
BP915126 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCACAAATAGCTGCTTGTCTTCTGCTAATTTATATCTAAACACACAACTTATATGTCATA TCTTATCTATTGAAGGCTTGCACAATCAATGTTTGATGACCTTGCTTTCAATCCATTTCA GCAGAAACCTTGTAATCTGTTGAAGGCTGGCAGTCAATCCTCGATGCACTAATTCTTTGC AAATCCATTTTTAGCAGAAATTATTCCTGCATATGATCTTCATTGATTTGTTCATGTGTA TATGCCAGCGAACAAACCTTCTTCATAAACTGCACCTGCAAATGCGCAGAGTGGCTCATT CTTGATTGCAATGGGCAGGTGCAGACGACATCCTCACCATATAGTGGTGGGCATATGTGC TTTTTGCCTCTCTGAGCAGCTGTCTTCCTTGCTTGTGAGAGAGGATGATGATGGAACAGA CCTCTATGCCCACTTACACACACATCCCAATCTGCACTCTCCCTTTGCTTTCACCCCACC ATCATGAGTACCTGCAGGTAATATCTCAAGGGCGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UTB4 |
Definition |
sp|Q9UTB4|MSS51_SCHPO Protein mss51 OS=Schizosaccharomyces pombe |
Align length |
70 |
Score (bit) |
31.6 |
E-value |
2.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SAM2 |
Definition |
tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
63 |
Score (bit) |
39.3 |
E-value |
0.12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915126|Adiantum capillus-veneris mRNA, clone: YMU001_000066_G10. (516 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.12 tr|A9RF80|A9RF80_PHYPA Predicted protein (Fragment) OS=Physcomit... 38 0.26 tr|B6SJR9|B6SJR9_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.75 tr|Q8H086|Q8H086_ORYSJ Putative uncharacterized protein OSJNBb00... 36 1.3 tr|Q69QA5|Q69QA5_ORYSJ Os06g0218800 protein OS=Oryza sativa subs... 36 1.3 tr|Q0DV57|Q0DV57_ORYSJ Os03g0148400 protein (Fragment) OS=Oryza ... 36 1.3 tr|B8B407|B8B407_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.3 tr|A3B9Q0|A3B9Q0_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.3 tr|Q8S7E3|Q8S7E3_ORYSA Putative uncharacterized protein OSJNBa00... 35 2.9 tr|Q7XC01|Q7XC01_ORYSJ Os10g0567600 protein OS=Oryza sativa subs... 35 2.9 tr|A7P2X9|A7P2X9_VITVI Chromosome chr1 scaffold_5, whole genome ... 35 2.9 tr|A3C7G0|A3C7G0_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.9 tr|A2ZAD5|A2ZAD5_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.9 tr|A7NVD2|A7NVD2_VITVI Chromosome chr18 scaffold_1, whole genome... 34 3.7 tr|B6TIQ0|B6TIQ0_MAIZE Putative uncharacterized protein OS=Zea m... 33 6.4
>tr|A9SAM2|A9SAM2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163837 PE=4 SV=1 Length = 528
Score = 39.3 bits (90), Expect = 0.12 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +2
Query: 320 CRRHPHHIVVGICAFCLSEQLSSLLVRED--DDGTDLYAHLHTHPNLHSPFAFTPPS*VP 493 C+ HP VG+CA CL E LS L V +D DD DL F + PS +P Sbjct: 6 CKWHPSQDNVGVCAHCLRESLSRLAVYQDEEDDSVDL-----------EVFPPSKPSAMP 54
Query: 494 AGN 502 AG+ Sbjct: 55 AGS 57
>tr|A9RF80|A9RF80_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158743 PE=4 SV=1 Length = 505
Score = 38.1 bits (87), Expect = 0.26 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +2
Query: 305 IAMGRCRRHPHHIVVGICAFCLSEQLSSLLV--REDDDGTDLYAHLHTHPNLHSPFAFTP 478 ++M C+ HP VG+CA CL E LS L V E+DD DL F + Sbjct: 1 MSMLGCKWHPSQDNVGVCAHCLRESLSRLAVCQDEEDDSIDL-----------EIFPPSK 49
Query: 479 PS*VPAGN 502 P+ +PAG+ Sbjct: 50 PTSIPAGS 57
>tr|B6SJR9|B6SJR9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 429
Score = 36.6 bits (83), Expect = 0.75 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +2
Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391 RC RHP ++ GIC+ CL E+LSS+ Sbjct: 22 RCGRHPSQLLTGICSSCLMERLSSV 46
>tr|Q8H086|Q8H086_ORYSJ Putative uncharacterized protein OSJNBb0050N02.5 (Putative uncharacterized protein) (Expressed protein) OS=Oryza sativa subsp. japonica GN=OSJNBb0050N02.5 PE=4 SV=1 Length = 445
Score = 35.8 bits (81), Expect = 1.3 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2
Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391 RC RHP + G+C+ CL E+LSS+ Sbjct: 35 RCGRHPSQVFTGVCSTCLMERLSSV 59
>tr|Q69QA5|Q69QA5_ORYSJ Os06g0218800 protein OS=Oryza sativa subsp. japonica GN=P0644A02.33 PE=2 SV=1 Length = 181
Score = 35.8 bits (81), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +2
Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391 RCRRHP H G+C FCL ++LS L Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39
>tr|Q0DV57|Q0DV57_ORYSJ Os03g0148400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0148400 PE=4 SV=1 Length = 442
Score = 35.8 bits (81), Expect = 1.3 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2
Query: 317 RCRRHPHHIVVGICAFCLSEQLSSL 391 RC RHP + G+C+ CL E+LSS+ Sbjct: 32 RCGRHPSQVFTGVCSTCLMERLSSV 56
>tr|B8B407|B8B407_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22180 PE=4 SV=1 Length = 181
Score = 35.8 bits (81), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +2
Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391 RCRRHP H G+C FCL ++LS L Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39
>tr|A3B9Q0|A3B9Q0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019772 PE=4 SV=1 Length = 213
Score = 35.8 bits (81), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +2
Query: 317 RCRRHP-HHIVVGICAFCLSEQLSSL 391 RCRRHP H G+C FCL ++LS L Sbjct: 14 RCRRHPKHRHAAGVCPFCLRDRLSRL 39
>tr|Q8S7E3|Q8S7E3_ORYSA Putative uncharacterized protein OSJNBa0057L21.14 OS=Oryza sativa GN=OSJNBa0057L21.14 PE=4 SV=1 Length = 292
Score = 34.7 bits (78), Expect = 2.9 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2
Query: 317 RCRRHPHHIVVGICAFCLSEQLSSLLVREDDDGTDLYAHLHTH 445 RC+ HP+ VG+CA CL ++L L + D A H H Sbjct: 2 RCKLHPYANAVGVCAPCLRDRLLDLAAQRDAAADAAEADDHHH 44
>tr|Q7XC01|Q7XC01_ORYSJ Os10g0567600 protein OS=Oryza sativa subsp. japonica GN=Os10g0567600 PE=4 SV=1 Length = 292
Score = 34.7 bits (78), Expect = 2.9 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2
Query: 317 RCRRHPHHIVVGICAFCLSEQLSSLLVREDDDGTDLYAHLHTH 445 RC+ HP+ VG+CA CL ++L L + D A H H Sbjct: 2 RCKLHPYANAVGVCAPCLRDRLLDLAAQRDAAADAAEADDHHH 44
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