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NBDC - LSDB Archive
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BP915131
Clone id YMU001_000066_H05
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGGATTTATTGATTCTGGATAGTGTGTATTCGAGCCCACCGTTATCTTGAATTGATA
GTGCACTGTTTTTGCGGCACTGCTTAGCCGAGATGCAGCTGCGCCAGTTGACGCTGTCAA
TATGACTGTCTTGTCTCGTTGTACGAACCTGGTCGTCATGTATTTGATGAGGAAGGACTT
TCTCGATCCTGGGACAACCGTGATAATGTGGAGGCCGGATGTTCTGGTGATGTGTCTTCA
AAAATCTTGTGTTGTTCAGGAGTGAGTGTTGCGTTACGGACATCGGCGAACTCCTTTAGA
AGCTGCAGCATGTTATGTCTACTAGTTTCCTTTGTATCATTTATCTCTACACGGCTTGAA
TGAATCGGACTCTCGCGGTTCAGGAAGAGCTTCTGGTGGATCAAGTTCACAATGTGCCCC
GTGTTCTCGTTTAAAAGCATGTTTCGTTGTGTGTACTCGTTGATGTACATCTCAAGGTTC
TCCTCGTCTCT
■■Homology search results ■■ -
sp_hit_id Q4PHC3
Definition sp|Q4PHC3|MVP1_USTMA Sorting nexin MVP1 OS=Ustilago maydis
Align length 93
Score (bit) 37.0
E-value 0.049
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915131|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H05.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4PHC3|MVP1_USTMA Sorting nexin MVP1 OS=Ustilago maydis GN=MV...    37   0.049
sp|Q9FGZ4|WRK48_ARATH Probable WRKY transcription factor 48 OS=A...    36   0.083
sp|Q8VBU2|NDRG2_RAT Protein NDRG2 OS=Rattus norvegicus GN=Ndrg2 ...    33   0.92 
sp|O68007|BACB_BACLI Bacitracin synthetase 2 OS=Bacillus licheni...    32   1.6  
sp|Q9QYG0|NDRG2_MOUSE Protein NDRG2 OS=Mus musculus GN=Ndrg2 PE=...    32   2.0  
sp|B1YKW2|FENR1_EXIS2 Ferredoxin--NADP reductase 1 OS=Exiguobact...    32   2.0  
sp|Q0UY53|ATG26_PHANO Sterol 3-beta-glucosyltransferase OS=Phaeo...    32   2.0  
sp|Q5YTJ4|SYD_NOCFA Aspartyl-tRNA synthetase OS=Nocardia farcini...    31   2.7  
sp|Q5RFI8|PGM2_PONAB Phosphoglucomutase-2 OS=Pongo abelii GN=PGM...    31   2.7  
sp|Q96G03|PGM2_HUMAN Phosphoglucomutase-2 OS=Homo sapiens GN=PGM...    31   2.7  
sp|Q8K070|SAM14_MOUSE Sterile alpha motif domain-containing prot...    31   3.5  
sp|Q8IZD0|SAM14_HUMAN Sterile alpha motif domain-containing prot...    31   3.5  
sp|Q5RBN6|NDRG2_PONAB Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=...    31   3.5  
sp|A5A6K6|NDRG2_PANTR Protein NDRG2 OS=Pan troglodytes GN=NDRG2 ...    31   3.5  
sp|Q9UN36|NDRG2_HUMAN Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=...    31   3.5  
sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida...    30   4.5  
sp|Q4R4K0|NDRG2_MACFA Protein NDRG2 OS=Macaca fascicularis GN=ND...    30   4.5  
sp|Q9BG76|EDN1_SHEEP Endothelin-1 OS=Ovis aries GN=EDN1 PE=2 SV=1      30   4.5  
sp|O23878|13S1_FAGES 13S globulin seed storage protein 1 OS=Fago...    30   4.5  
sp|O94751|BUB1_SCHPO Checkpoint serine/threonine-protein kinase ...    30   5.9  
sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Maca...    30   5.9  
sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12...    30   7.8  

>sp|Q4PHC3|MVP1_USTMA Sorting nexin MVP1 OS=Ustilago maydis GN=MVP1
           PE=3 SV=1
          Length = 683

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = -1

Query: 320 RHNMLQLLKEFADVRNATLTPEQHKIFEDTSPEHPASTLSRLSQ-DRESPSSSNT*RPGS 144
           R  M  L     D+ +ATL P  H  F  T+P  P+    R S   RE     N    GS
Sbjct: 128 RLTMGSLSAPVLDLSDATLNPHSHHTFPPTAPSGPSRIDPRPSTFMREMSDPWNANSSGS 187

Query: 143 YN--ETRQSY*QRQLAQLHLG*AVPQKQCTINS 51
           YN  +TR +Y Q          A+PQ+  T+NS
Sbjct: 188 YNGIDTRPAYNQYD--------AMPQQYDTLNS 212


>sp|Q9FGZ4|WRK48_ARATH Probable WRKY transcription factor 48
           OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1
          Length = 399

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -1

Query: 359 SSRVEINDTKETSRHNMLQLLKEFADVRNATLTPEQHKIFEDTSPEHPASTLSRLSQDRE 180
           SS   + +   +S H+ L+L    + + + +  P  +  FED S  +P S L  L QD +
Sbjct: 44  SSSSNMANLVTSSDHHPLELAGNLSSIFDTSSLPFPYSYFEDHSSNNPNSFLDLLRQDHQ 103

Query: 179 SPSSSNT 159
             SSSN+
Sbjct: 104 FASSSNS 110


>sp|Q8VBU2|NDRG2_RAT Protein NDRG2 OS=Rattus norvegicus GN=Ndrg2
           PE=1 SV=1
          Length = 371

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
 Frame = -1

Query: 482 ENLEMYINEYTQRNMLLNENTGHIVNLIHQKLFLNRESPIHSSRVEINDTKETSRHNMLQ 303
           EN+E+Y N Y  R  L  E  G +       L +  ++P   + VE N   + ++ + L+
Sbjct: 228 ENIELYWNSYNNRRDLNFERGGEMTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLK 287

Query: 302 LLKEFAD---VRNATLTPEQHKIFEDTSPEHPASTLSRLSQDRESPSSSNT*RPGSYNET 132
           +          +   LT E  K F        +S ++RLS+ R +  +S     GS + +
Sbjct: 288 MADSGGQPQLTQPGKLT-EAFKYFVQGMGYMASSCMTRLSRSRTASLTSAASIDGSRSRS 346

Query: 131 R 129
           R
Sbjct: 347 R 347


>sp|O68007|BACB_BACLI Bacitracin synthetase 2 OS=Bacillus
            licheniformis GN=bacB PE=3 SV=1
          Length = 2607

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
 Frame = -1

Query: 356  SRVEINDTKETSRHNMLQLLKEFADVRNATLTP-------EQHKI---FEDTSPEHPAST 207
            +R+   +T ET   + + +L++ +D    TL         E+H +   F DT+ EHP+  
Sbjct: 1492 TRLYKKETAETLAQHFVNILRDISDHPQKTLNDISMLSEEERHTVLYQFNDTNTEHPSGI 1551

Query: 206  LSRLSQDRESPSSSN 162
             S L +++   S ++
Sbjct: 1552 FSELFEEQAEKSPNH 1566


>sp|Q9QYG0|NDRG2_MOUSE Protein NDRG2 OS=Mus musculus GN=Ndrg2 PE=1
           SV=1
          Length = 371

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
 Frame = -1

Query: 482 ENLEMYINEYTQRNMLLNENTGHIVNLIHQKLFLNRESPIHSSRVEINDTKETSRHNMLQ 303
           EN+E+Y N Y  R  L  E  G         L +  ++P   + VE N   + ++ + L+
Sbjct: 228 ENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLK 287

Query: 302 LLKEFAD---VRNATLTPEQHKIFEDTSPEHPASTLSRLSQDRESPSSSNT*RPGSYNET 132
           +          +   LT E  K F        +S ++RLS+ R +  +S     GS + +
Sbjct: 288 MADSGGQPQLTQPGKLT-EAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGSRSRS 346

Query: 131 R 129
           R
Sbjct: 347 R 347


>sp|B1YKW2|FENR1_EXIS2 Ferredoxin--NADP reductase 1
           OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
           13490 / 255-15) GN=Exig_2313 PE=3 SV=1
          Length = 331

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 171 LIKYMTTRFVQRDKTVILTASTGAAASRLSSAAKTVHYQFKITVGSNTHY 22
           LI+ +T +     KTVILTA  G+ A+R    A    ++     GSN HY
Sbjct: 97  LIRLVTNKGEHYTKTVILTAGNGSFAARPLGVADAERFE-----GSNLHY 141


>sp|Q0UY53|ATG26_PHANO Sterol 3-beta-glucosyltransferase
           OS=Phaeosphaeria nodorum GN=ATG26 PE=3 SV=1
          Length = 1453

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = -1

Query: 443 NMLLNENTGHIVNLIHQKLFLNRESPIHSSRVEINDTKETSRHNMLQLLKEFADVRNATL 264
           + +LN +       IH     + E P  ++R   + T+ +     LQLL   +   N +L
Sbjct: 608 SQILNRSDVFRAPAIHSAGVSHSERPQQAARHSQDTTRSSGADQHLQLLVRPSKQTNTSL 667

Query: 263 TPEQHKIFEDTSPEHPASTLSRLS 192
            P   +  EDT    P+ TL RLS
Sbjct: 668 LPASTEAEEDTD---PSQTLPRLS 688


>sp|Q5YTJ4|SYD_NOCFA Aspartyl-tRNA synthetase OS=Nocardia farcinica
           GN=aspS PE=3 SV=1
          Length = 597

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = -1

Query: 464 INEYTQRNMLLNENTGHIVNLIHQKLFLNRESPIHSSRVEINDTKETSRHNMLQLLKEFA 285
           +NE       L+E  G    L H+ L L RE P H+ R+    +K  +    +    EF 
Sbjct: 101 LNESAPLPFQLDEQPGEEARLKHRYLDLRREGPAHAIRLR---SKVNAAAREVLARHEFV 157

Query: 284 DVRNATLT 261
           +V   TLT
Sbjct: 158 EVETPTLT 165


>sp|Q5RFI8|PGM2_PONAB Phosphoglucomutase-2 OS=Pongo abelii GN=PGM2
           PE=2 SV=3
          Length = 612

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 468 VHQRVHTTKHAFKREHGAHCELDPPEALPEPRESD 364
           VH  VH   H+F +      +L PPEA+PE ++ D
Sbjct: 251 VHTSVHGVGHSFVQSAFKAFDLVPPEAVPEQKDPD 285


>sp|Q96G03|PGM2_HUMAN Phosphoglucomutase-2 OS=Homo sapiens GN=PGM2
           PE=1 SV=4
          Length = 612

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 468 VHQRVHTTKHAFKREHGAHCELDPPEALPEPRESD 364
           VH  VH   H+F +      +L PPEA+PE ++ D
Sbjct: 251 VHTSVHGVGHSFVQSAFKAFDLVPPEAVPEQKDPD 285
tr_hit_id A8JJJ7
Definition tr|A8JJJ7|A8JJJ7_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii
Align length 62
Score (bit) 54.3
E-value 3.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915131|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H05.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8JJJ7|A8JJJ7_CHLRE Predicted protein (Fragment) OS=Chlamydom...    54   3e-06
tr|B1B8N5|B1B8N5_CLOBO Helicase, RecD/TraA family OS=Clostridium...    44   0.004
tr|B0S3H7|B0S3H7_FINM2 ATP-dependent exodeoxyribonuclease alpha ...    44   0.005
tr|A4XG10|A4XG10_CALS8 ATP-dependent DNA helicase, RecD/TraA fam...    44   0.005
tr|B6Y5W8|B6Y5W8_ANATH Helicase, RecD/TraA family OS=Anaerocellu...    44   0.005
tr|A0Q2Y3|A0Q2Y3_CLONN Helicase, RecD/TraA family OS=Clostridium...    42   0.012
tr|Q2JCR4|Q2JCR4_FRASC Helicase RecD/TraA OS=Frankia sp. (strain...    41   0.034
tr|Q97F87|Q97F87_CLOAB ATP-dependent exoDNAse (Exonuclease V), a...    40   0.058
tr|A5N3G4|A5N3G4_CLOK5 Predicted exodeoxyribonuclease OS=Clostri...    40   0.058
tr|B6FVX7|B6FVX7_9CLOT Putative uncharacterized protein OS=Clost...    40   0.076
tr|B2UZL1|B2UZL1_CLOBA Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B2TK11|B2TK11_CLOBB Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B1KSU0|B1KSU0_CLOBM Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B1IE46|B1IE46_CLOBK Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|A8LH98|A8LH98_FRASN Helicase, RecD/TraA family OS=Frankia sp....    39   0.099
tr|A7G9S2|A7G9S2_CLOBL Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|A7FQI9|A7FQI9_CLOB1 Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|A5HY63|A5HY63_CLOBH Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B1QIK7|B1QIK7_CLOBO Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B1Q8N2|B1Q8N2_CLOBO Helicase, RecD/TraA family OS=Clostridium...    39   0.099
tr|B0A7Z6|B0A7Z6_9CLOT Putative uncharacterized protein OS=Clost...    39   0.13 
tr|A5Z851|A5Z851_9FIRM Putative uncharacterized protein OS=Eubac...    39   0.13 
tr|A3DHM2|A3DHM2_CLOTH ATP-dependent DNA helicase, RecD/TraA fam...    39   0.17 
tr|B5GV46|B5GV46_STRCL Exodeoxyribonuclease V OS=Streptomyces cl...    38   0.22 
tr|Q898W6|Q898W6_CLOTE Exodeoxyribonuclease V alpha chain OS=Clo...    38   0.29 
tr|Q18CM1|Q18CM1_CLOD6 Putative DNA-binding protein OS=Clostridi...    38   0.29 
tr|A8LYJ0|A8LYJ0_SALAI Helicase, RecD/TraA family OS=Salinispora...    38   0.29 
tr|A4X1G5|A4X1G5_SALTO Helicase, RecD/TraA family OS=Salinispora...    37   0.38 
tr|B1R2K6|B1R2K6_CLOBU Helicase, RecD/TraA family OS=Clostridium...    37   0.38 
tr|Q8R8A3|Q8R8A3_THETN ATP-dependent exoDNAse (Exonuclease V), a...    37   0.49 

>tr|A8JJJ7|A8JJJ7_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_181173 PE=4
           SV=1
          Length = 301

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = -3

Query: 219 SGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSAAKTVHYQFKITV 40
           +G+ ++T  PGS K+F  K +T +  Q  KTV+LTASTGAAA RLS+ A T H  F +  
Sbjct: 110 AGVIVLTGGPGSGKTFTTKKLTRQLRQMGKTVMLTASTGAAAVRLSAFATTNHGAFDLPS 169

Query: 39  GS 34
           G+
Sbjct: 170 GN 171


>tr|B1B8N5|B1B8N5_CLOBO Helicase, RecD/TraA family OS=Clostridium
           botulinum C str. Eklund GN=CBC_0743 PE=4 SV=1
          Length = 735

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
 Frame = -3

Query: 219 SGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVH 61
           SG+ IIT  PG+ K+ +IK +T  F     TV + A TG AA R+S A    +KT+H
Sbjct: 333 SGIEIITGGPGTGKTTIIKCITEIFENASMTVFMAAPTGRAAKRMSEATGRESKTIH 389


>tr|B0S3H7|B0S3H7_FINM2 ATP-dependent exodeoxyribonuclease alpha
           subunit OS=Finegoldia magna (strain ATCC 29328)
           GN=FMG_1499 PE=4 SV=1
          Length = 743

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
 Frame = -3

Query: 222 TSGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVH 61
           T  + IIT  PG+ K+ +I  +T  F   DK +IL A TG AA RLS +    AKT+H
Sbjct: 328 TEKMLIITGGPGTGKTTIINNITKIFKNNDKEIILAAPTGRAAKRLSESCNEEAKTIH 385


>tr|A4XG10|A4XG10_CALS8 ATP-dependent DNA helicase, RecD/TraA family
           OS=Caldicellulosiruptor saccharolyticus (strain ATCC
           43494 / DSM 8903) GN=Csac_0197 PE=4 SV=1
          Length = 741

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -3

Query: 222 TSGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRL----SSAAKTVHYQ 55
           T G+ +IT  PG+ K+ +IK +   F Q  K V L A TG AA R+       AKT+H  
Sbjct: 332 TQGVSVITGGPGTGKTTIIKCIIEIFEQEGKKVFLCAPTGRAAKRMQQQCEKEAKTIHRL 391

Query: 54  FKITV 40
            ++TV
Sbjct: 392 LEMTV 396


>tr|B6Y5W8|B6Y5W8_ANATH Helicase, RecD/TraA family OS=Anaerocellum
           thermophilum DSM 6725 GN=AtheDRAFT_2871 PE=4 SV=1
          Length = 692

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = -3

Query: 222 TSGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVHYQ 55
           T G+ IIT  PG+ K+ +IK +   F    K V L A TG AA R+ +A    +KT+H  
Sbjct: 283 TQGVSIITGGPGTGKTTIIKCIIQIFEGEGKKVFLCAPTGRAAKRMQAACERESKTIHRL 342

Query: 54  FKITV 40
            +ITV
Sbjct: 343 LEITV 347


>tr|A0Q2Y3|A0Q2Y3_CLONN Helicase, RecD/TraA family OS=Clostridium
           novyi (strain NT) GN=NT01CX_0515 PE=4 SV=1
          Length = 735

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = -3

Query: 216 GLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVH 61
           G+ IIT  PG+ K+ +IK +T  F     TV + A TG AA R+S A    +KT+H
Sbjct: 334 GIEIITGGPGTGKTTIIKCITEIFENASMTVFMAAPTGRAAKRMSEATGRESKTIH 389


>tr|Q2JCR4|Q2JCR4_FRASC Helicase RecD/TraA OS=Frankia sp. (strain
           CcI3) GN=Francci3_1552 PE=4 SV=1
          Length = 739

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 222 TSGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSS----AAKTVHYQ 55
           TS + ++T  PG  KSF ++ + T  + R   VIL A TG AA RL+      A TVH  
Sbjct: 353 TSRVAVLTGGPGCGKSFTVRSIVTLALARQAKVILAAPTGRAAKRLTELTGHEASTVHRL 412

Query: 54  FKITVGSNTHY 22
            ++  G +  +
Sbjct: 413 LELRPGGDAAF 423


>tr|Q97F87|Q97F87_CLOAB ATP-dependent exoDNAse (Exonuclease V),
           alpha subunit, RecD OS=Clostridium acetobutylicum
           GN=recD PE=4 SV=1
          Length = 739

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = -3

Query: 222 TSGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVHYQ 55
           ++G+ +IT  PG+ K+ +I+ +T  F + +  V + A TG AA R+S +    AKT+H  
Sbjct: 333 SNGIEVITGGPGTGKTTIIRCITYIFEELNMKVFMAAPTGRAAKRMSESTGREAKTIHRM 392

Query: 54  FKI 46
            ++
Sbjct: 393 LEL 395


>tr|A5N3G4|A5N3G4_CLOK5 Predicted exodeoxyribonuclease
           OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
           NCIMB 10680) GN=CKL_3670 PE=4 SV=1
          Length = 750

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -3

Query: 219 SGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVHYQF 52
           + + IIT  PG+ K+ +I  M   F + +  V++ A TG AA R+S A    AKT+H   
Sbjct: 333 NSVEIITGGPGTGKTTIINCMIQLFEKSNLKVLMAAPTGRAAKRMSEATKREAKTIHRLL 392

Query: 51  KITVGSN 31
           +I V S+
Sbjct: 393 EIGVESD 399


>tr|B6FVX7|B6FVX7_9CLOT Putative uncharacterized protein
           OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_00026 PE=4
           SV=1
          Length = 739

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
 Frame = -3

Query: 219 SGLHIITVVPGSRKSFLIKYMTTRFVQRDKTVILTASTGAAASRLSSA----AKTVH 61
           SG+ +IT  PG+ K+  I  +   F ++ K V+L A TG AA R+S      AKT+H
Sbjct: 334 SGVSVITGGPGTGKTTTINTIIKIFKRQKKEVVLAAPTGRAAKRMSETSNEEAKTIH 390