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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915134
Clone id YMU001_000066_H08
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGGACGATTTAAGAGCTCCATGAAACCTTGAGCCTGTTCTGTGAGAAGCCTCACCTCCTT
CATCATTTCAAGCTTGCTCTTGCGAGCATAGGAAGCATACGAATTGACCAAAGAGATCGT
GATCGTTGGCTTGTTTGAAAAGTGTATCTACCTTCAATTTAAGTGGATCCGACCTCAGAG
CACTTAACCTGCGCATGACAAGTCCTCTTTGACCAGTGAAATTCAGTGTCTCTCTTTCAG
ATCCCACGCTTAACCCGGAGCCATTGTGGAGGGAGAACGCAGAAAACGTGAAGATGAGGA
GAGTGGTGGCCAGGAGGAAGAAGAAGGCGAGGAGGAAAGACCGTTTCCGGAAGGATGTAG
GGGAAGATGCAAGACCTCTGGTAACGGCCATGGCCTTCGATGCTTGGTTGAGGAGAAGAA
ACTTCAATGGATCCTGTGGGAA
■■Homology search results ■■ -
sp_hit_id Q9FWA4
Definition sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana
Align length 39
Score (bit) 39.7
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915134|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H08.
         (442 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g023...    40   1e-06
sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidops...    40   6e-05
sp|A8GP33|UVRC_RICAH UvrABC system protein C OS=Rickettsia akari...    30   5.9  

>sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g02350
           OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1
          Length = 561

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = -2

Query: 117 ISLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           ++LVN+YA+YARK KL+  K+++L  + A  F +L ++P
Sbjct: 94  LTLVNAYAAYARKLKLDASKQLKLFEDLAINFSDLQSKP 132



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 199 VMRRLSALRSDPLKLKVDTLFKQANDH 119
           + R   AL+SDPLK ++D + KQA DH
Sbjct: 67  MQRTFLALQSDPLKTRLDLIHKQAIDH 93


>sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidopsis
           thaliana GN=QUA1 PE=1 SV=1
          Length = 559

 Score = 39.7 bits (91), Expect(2) = 6e-05
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = -2

Query: 114 SLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           SL  +YASYARK KLE  K VR+  + ++ + +L+N+P
Sbjct: 92  SLALAYASYARKLKLENSKLVRIFADLSRNYTDLINKP 129



 Score = 26.2 bits (56), Expect(2) = 6e-05
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 193 RRLSALRSDPLKLKVDTLFKQANDH 119
           R +  ++SDPLK ++  + KQA+DH
Sbjct: 66  RSMLDIKSDPLKPRLIQIRKQADDH 90


>sp|A8GP33|UVRC_RICAH UvrABC system protein C OS=Rickettsia akari
           (strain Hartford) GN=uvrC PE=3 SV=1
          Length = 651

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
 Frame = -1

Query: 250 SVGSERETLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDH--------DLFGQFVC 95
           +VG + E L     R +++RRL+ L+++P KL    +      H        D F   + 
Sbjct: 479 AVGDDYEML-----RQVLIRRLTRLKNEPHKLPSLMIIDGGKGHLGIVKEVMDKFAMHIP 533

Query: 94  FLCSQEQA*NDEGGEASHRTG 32
           F+C  +    + G E  H TG
Sbjct: 534 FVCMSKGVDRNAGIEQFHMTG 554
tr_hit_id A7PAH6
Definition tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera
Align length 39
Score (bit) 42.4
E-value 4.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915134|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H08.
         (442 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome...    42   4e-07
tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis...    42   4e-07
tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleom...    39   7e-06
tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Popul...    41   7e-06
tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleom...    37   2e-05

>tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038116001
           PE=4 SV=1
          Length = 543

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 18/39 (46%), Positives = 30/39 (76%)
 Frame = -2

Query: 117 ISLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           I+LVN+YA+YARK KL++ +++R+  + A+ F +L  RP
Sbjct: 91  ITLVNAYAAYARKLKLDISRQLRMFDDLARNFSDLAARP 129



 Score = 34.7 bits (78), Expect(2) = 4e-07
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -1

Query: 199 VMRRLSALRSDPLKLKVDTLFKQANDH 119
           + R   AL+SDPL+ ++D + KQANDH
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDH 90


>tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022574 PE=4 SV=1
          Length = 543

 Score = 42.4 bits (98), Expect(2) = 4e-07
 Identities = 18/39 (46%), Positives = 30/39 (76%)
 Frame = -2

Query: 117 ISLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           I+LVN+YA+YARK KL++ +++R+  + A+ F +L  RP
Sbjct: 91  ITLVNAYAAYARKLKLDISRQLRMFDDLARNFSDLAARP 129



 Score = 34.7 bits (78), Expect(2) = 4e-07
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -1

Query: 199 VMRRLSALRSDPLKLKVDTLFKQANDH 119
           + R   AL+SDPL+ ++D + KQANDH
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDH 90


>tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 556

 Score = 38.5 bits (88), Expect(2) = 7e-06
 Identities = 16/39 (41%), Positives = 29/39 (74%)
 Frame = -2

Query: 117 ISLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           ++LVN+YA+YARK K++  K+++L  + A  F +L ++P
Sbjct: 89  LTLVNAYAAYARKLKVDASKQLKLFEDLAINFSDLQSKP 127



 Score = 34.3 bits (77), Expect(2) = 7e-06
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = -1

Query: 229 TLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDH 119
           TL  TG    + R   AL+SDPLK +VD + KQA DH
Sbjct: 53  TLPNTGS-AYMHRTFLALQSDPLKTRVDLIHKQATDH 88


>tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 554

 Score = 40.8 bits (94), Expect(2) = 7e-06
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = -2

Query: 114 SLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           SL ++YASYARK KLE  K VR+  + ++ + +L+N+P
Sbjct: 87  SLAHAYASYARKLKLENSKLVRVFADLSRNYTDLINKP 124



 Score = 32.0 bits (71), Expect(2) = 7e-06
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -1

Query: 193 RRLSALRSDPLKLKVDTLFKQANDH 119
           R + A++SDPLK ++D + KQA+DH
Sbjct: 61  RSVLAMKSDPLKSRLDQIRKQADDH 85


>tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 528

 Score = 37.0 bits (84), Expect(2) = 2e-05
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = -2

Query: 117 ISLVNSYASYARKSKLEMMKEVRLLTEQAQGFMELLNRP 1
           ++LVN+YA+YARK KL+  K+++L  +    F +L  +P
Sbjct: 96  LTLVNAYAAYARKLKLDASKQLKLFEDLGINFSDLQYKP 134



 Score = 34.3 bits (77), Expect(2) = 2e-05
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -1

Query: 193 RRLSALRSDPLKLKVDTLFKQANDH 119
           R   AL+SDPLK ++D ++KQA DH
Sbjct: 71  RTFLALQSDPLKTRLDLIYKQATDH 95