BP915135
Clone id YMU001_000066_H09
Library
Length 272
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGAGATATTACCTGCAGGTACTCCTTTATGCTGTAATTGGTGCCGCCTCCAAGCTTGAT
GCCCTCCACTCAATCGGCGCCAACAACGAGCCCTTGTACCCTCAAACAGTGAAGCCCCTT
GGCGCTGCCTTCAACTCTCTGCTTTTAGCTAGCAAAGCTTGGCCGGCGACCTCTTGAAGG
ACCACACACATCCCCAATAGCGCTCAGGTGGTTTATCTCCAGCTCGGGCGGTTTATTCAT
CGAAGCAGTCCGGAATTATAATAAGGGTTGAC
■■Homology search results ■■ -
sp_hit_id A6VTA1
Definition sp|A6VTA1|UBIE_MARMS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Marinomonas sp. (strain MWYL1)
Align length 23
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915135|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H09.
(272 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6VTA1|UBIE_MARMS Ubiquinone/menaquinone biosynthesis methylt... 30 4.9
sp|Q6Y5D8|RHG10_MOUSE Rho GTPase-activating protein 10 OS=Mus mu... 30 4.9
sp|Q2G3C3|SYL_NOVAD Leucyl-tRNA synthetase OS=Novosphingobium ar... 29 8.4

>sp|A6VTA1|UBIE_MARMS Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Marinomonas sp. (strain MWYL1)
GN=ubiE PE=3 SV=1
Length = 251

Score = 29.6 bits (65), Expect = 4.9
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2

Query: 73 LSGG-HQAWRRHQLQHKGVPAGN 8
+SGG H+ W+RH + GV AGN
Sbjct: 43 MSGGIHRLWKRHTISQSGVRAGN 65


>sp|Q6Y5D8|RHG10_MOUSE Rho GTPase-activating protein 10 OS=Mus
musculus GN=Arhgap10 PE=1 SV=2
Length = 786

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3

Query: 249 TASMNKPPELEINHLSAIGDVCGPSRGRRPS 157
T++ + PP L+ NHL+A G CG + PS
Sbjct: 648 TSAAHGPPGLDGNHLAADGGSCGDATATTPS 678


>sp|Q2G3C3|SYL_NOVAD Leucyl-tRNA synthetase OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=leuS PE=3 SV=1
Length = 848

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1

Query: 43 AASKLDALHSIGANNEPLYPQTVKPLGAAFNSLLLASKAWP 165
+AS+ DA+ + P+ P + A F S L+A AWP
Sbjct: 737 SASRSDAIRKLLLLVAPMMPHLAEEAYARFGSSLIADAAWP 777


tr_hit_id Q16SD7
Definition tr|Q16SD7|Q16SD7_AEDAE Down syndrome cell adhesion molecule OS=Aedes aegypti
Align length 62
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915135|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_H09.
(272 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q16SD7|Q16SD7_AEDAE Down syndrome cell adhesion molecule OS=A... 35 2.4
tr|Q68J72|Q68J72_APIME Dscam OS=Apis mellifera PE=4 SV=1 33 9.1
tr|B0WFY3|B0WFY3_CULQU Down syndrome cell adhesion molecule OS=C... 33 9.1

>tr|Q16SD7|Q16SD7_AEDAE Down syndrome cell adhesion molecule OS=Aedes
aegypti GN=AAEL010606 PE=4 SV=1
Length = 1990

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1

Query: 4 RYYLQVLLYAVIGAASKLDALHSIGANNEPLYPQTVKPLGAAFNSLLLASKAWPATS*RT 183
RY + Y IGA D L++ ++PL P+ + + A+ NS+ L AW R
Sbjct: 1452 RYQVYATAYNTIGAGEPSDILNTRTKGSKPLLPEKSRFIEASSNSITLHLPAWKDGGCRM 1511

Query: 184 TH 189
+H
Sbjct: 1512 SH 1513


>tr|Q68J72|Q68J72_APIME Dscam OS=Apis mellifera PE=4 SV=1
Length = 1946

Score = 32.7 bits (73), Expect = 9.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1

Query: 4 RYYLQVLLYAVIGAASKLDALHSIGANNEPLYPQTVKPLGAAFNSLLLASKAW 162
RY + V Y IG D L++ ++P+ P+ + + A NS+ L AW
Sbjct: 1432 RYQIYVTAYNGIGTGDPSDMLNTRTKGSKPIIPEAARFIEVATNSITLHLNAW 1484


>tr|B0WFY3|B0WFY3_CULQU Down syndrome cell adhesion molecule OS=Culex
quinquefasciatus GN=CpipJ_CPIJ006173 PE=4 SV=1
Length = 1315

Score = 32.7 bits (73), Expect = 9.1
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1

Query: 4 RYYLQVLLYAVIGAASKLDALHSIGANNEPLYPQTVKPLGAAFNSLLLASKAWPATS*RT 183
RY + Y +IGA D L++ ++PL P+ + + + NS+ L AW R
Sbjct: 896 RYQVYSTAYNMIGAGEPSDILNTRTKGSKPLLPEKSRFIEVSSNSITLHLPAWKDGGCRM 955

Query: 184 TH 189
+H
Sbjct: 956 SH 957