BP915139 |
Clone id |
YMU001_000067_A02 |
Library |
YMU01 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000067_A02. |
Accession |
BP915139 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2559Contig1 |
Sequence |
CTCCAACCTTCCCCTCGACTTTGATAAGATCCAAGTTTACATCTTTCCTCTCAAGATCAG CTACGGCCAACACTGCTTTGACTGCAATTTCAGCAAGCTTTCGCTTGCAGCGATTAACTA TTTTTGAAGATAATGTTGTCATGCACGTCTGCACAAGAGGCTCAATATCCAAGGAGCTAA ATTCAAATTTTTGAGCAATGTTGGAAAGATGTTCAACAGCTATCTTTGACGCCATTTCAT AGCCTTCTGCTATTCGGATGGGATGGATTCCTCTGTCAAGTAAAAGCCCAGCCTGCTCAA GCAATGCACCAGCTGTTACCACTACTCCCGTTGTTCCATCACCTATCTCGCAATCTTGAC TCCTCGACAATTCCACCATCAACTTTCCTATTTGATTATCCACGTCCATCTGCTCCAAAA TAGTGGCTCCATCATTTGTGATAGTCACATCGCCATCCGGACTCTGCAGCATTTTGTCCA TGCCCTTGGGGCCAAGCGAGGTGCGGAGGATTCTGGCTACGGCCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04450 |
Definition |
sp|O04450|TCPE_ARATH T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
256.0 |
E-value |
5.0e-68 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQY7 |
Definition |
tr|B8LQY7|B8LQY7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
175 |
Score (bit) |
261.0 |
E-value |
2.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915139|Adiantum capillus-veneris mRNA, clone: YMU001_000067_A02. (526 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQY7|B8LQY7_PICSI Putative uncharacterized protein OS=Picea... 261 2e-68 tr|A7PJV1|A7PJV1_VITVI Chromosome chr12 scaffold_18, whole genom... 258 1e-67 tr|A7P458|A7P458_VITVI Chromosome chr1 scaffold_5, whole genome ... 258 1e-67 tr|B6TSC6|B6TSC6_MAIZE T-complex protein 1 subunit epsilon OS=Ze... 258 1e-67 tr|B4FQL5|B4FQL5_MAIZE Putative uncharacterized protein OS=Zea m... 258 1e-67 tr|Q5Z907|Q5Z907_ORYSJ Os06g0562600 protein OS=Oryza sativa subs... 256 5e-67 tr|A2YE41|A2YE41_ORYSI Putative uncharacterized protein OS=Oryza... 256 5e-67 tr|B4FS49|B4FS49_MAIZE Putative uncharacterized protein OS=Zea m... 255 8e-67 tr|A9TJ27|A9TJ27_PHYPA Predicted protein OS=Physcomitrella paten... 251 2e-65 tr|A9PAT0|A9PAT0_POPTR Putative uncharacterized protein OS=Popul... 250 3e-65 tr|A3BCS7|A3BCS7_ORYSJ Putative uncharacterized protein OS=Oryza... 245 1e-63 tr|A4RU28|A4RU28_OSTLU Predicted protein OS=Ostreococcus lucimar... 237 3e-61 tr|A8J7J2|A8J7J2_CHLRE T-complex protein, epsilon subunit OS=Chl... 233 6e-60 tr|Q01D11|Q01D11_OSTTA Chaperonin complex component, TCP-1 beta ... 222 8e-57 tr|A7RGP0|A7RGP0_NEMVE Predicted protein OS=Nematostella vectens... 204 2e-51 tr|A0AUT4|A0AUT4_XENLA LOC100036778 protein OS=Xenopus laevis GN... 203 5e-51 tr|Q5F411|Q5F411_CHICK Putative uncharacterized protein OS=Gallu... 202 6e-51 tr|Q7ZTM0|Q7ZTM0_XENLA Cct5-prov protein OS=Xenopus laevis GN=cc... 201 1e-50 tr|Q6P2Y0|Q6P2Y0_XENTR Chaperonin containing TCP1, subunit 5 (Ep... 201 2e-50 tr|Q8T5T5|Q8T5T5_PHYPO Chaperonin containing TCP-1 epsilon subun... 201 2e-50 tr|B7Q6Y2|B7Q6Y2_IXOSC Chaperonin subunit, putative OS=Ixodes sc... 200 4e-50 tr|Q6NVI6|Q6NVI6_DANRE Chaperonin containing TCP1, subunit 5 (Ep... 198 2e-49 tr|B6PAE5|B6PAE5_BRAFL Putative uncharacterized protein OS=Branc... 198 2e-49 tr|B6MPC5|B6MPC5_BRAFL Putative uncharacterized protein OS=Branc... 198 2e-49 tr|Q9BU08|Q9BU08_HUMAN Putative uncharacterized protein (Fragmen... 198 2e-49 tr|B7ZAR1|B7ZAR1_HUMAN cDNA, FLJ79275, highly similar to T-compl... 198 2e-49 tr|B4DDU6|B4DDU6_HUMAN cDNA FLJ50442, highly similar to T-comple... 198 2e-49 tr|A8JZY8|A8JZY8_HUMAN cDNA FLJ75559, highly similar to Homo sap... 198 2e-49 tr|A8K2X8|A8K2X8_HUMAN cDNA FLJ78433, highly similar to Homo sap... 197 2e-49 tr|B8C5R2|B8C5R2_THAPS T-complex chaperonin protein, epsilon sub... 197 3e-49
>tr|B8LQY7|B8LQY7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 535
Score = 261 bits (666), Expect = 2e-68 Identities = 142/175 (81%), Positives = 146/175 (83%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 +AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV+NQIGKLMVELSRSQD E Sbjct: 38 RAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVENQIGKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIRIAEGYEMASKIAVEHL I+QKFEFS + Sbjct: 98 IGDGTTGVVVTAGALLEHAEQLLERGIHPIRIAEGYEMASKIAVEHLDRISQKFEFSLNN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IE LVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IESLVQTCMTTLSSKIVNRCKRMLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|A7PJV1|A7PJV1_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018888001 PE=3 SV=1 Length = 535
Score = 258 bits (660), Expect = 1e-67 Identities = 138/175 (78%), Positives = 145/175 (82%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDK+LQSPDGDVTITNDGATILEQMDVDNQI KLMVELSRSQD E Sbjct: 38 KAVARILRTSLGPKGMDKILQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIR+AEGYEMA +IAVEHL +IAQKFEF + Sbjct: 98 IGDGTTGVVVLAGALLEQAEGLLERGIHPIRVAEGYEMACRIAVEHLEHIAQKFEFGVTN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAV+AVADLER+DVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVMAVADLERRDVNLDLIKVEGKVG 212
>tr|A7P458|A7P458_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030706001 PE=3 SV=1 Length = 535
Score = 258 bits (660), Expect = 1e-67 Identities = 138/175 (78%), Positives = 146/175 (83%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI KL+VELSRSQD E Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLVVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIRI+EGYEMAS+IAVEHL +IAQKF+F + Sbjct: 98 IGDGTTGVVVMAGALLEQAERLLERGIHPIRISEGYEMASRIAVEHLEHIAQKFDFGVTN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAV++VADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVMSVADLERKDVNLDLIKVEGKVG 212
>tr|B6TSC6|B6TSC6_MAIZE T-complex protein 1 subunit epsilon OS=Zea mays PE=2 SV=1 Length = 535
Score = 258 bits (659), Expect = 1e-67 Identities = 138/175 (78%), Positives = 146/175 (83%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDKMLQSPDGDV ITNDGATILEQMDVDNQI KLMVELSRSQD E Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVIITNDGATILEQMDVDNQIAKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIR+AEGYEMASK+A +HL +I++KFEFS+ + Sbjct: 98 IGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASKVAFDHLEHISEKFEFSADN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|B4FQL5|B4FQL5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 535
Score = 258 bits (659), Expect = 1e-67 Identities = 138/175 (78%), Positives = 146/175 (83%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDKMLQSPDGDV ITNDGATILEQMDVDNQI KLMVELSRSQD E Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVIITNDGATILEQMDVDNQIAKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIR+AEGYEMASK+A +HL +I++KFEFS+ + Sbjct: 98 IGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASKVAFDHLEHISEKFEFSADN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|Q5Z907|Q5Z907_ORYSJ Os06g0562600 protein OS=Oryza sativa subsp. japonica GN=P0656E03.11 PE=2 SV=1 Length = 535
Score = 256 bits (654), Expect = 5e-67 Identities = 138/175 (78%), Positives = 145/175 (82%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI KLMVELS SQD E Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIRIAEGYE+AS+IA +HL +I+ KFEFS+ + Sbjct: 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|A2YE41|A2YE41_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23386 PE=3 SV=1 Length = 535
Score = 256 bits (654), Expect = 5e-67 Identities = 138/175 (78%), Positives = 145/175 (82%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI KLMVELS SQD E Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIRIAEGYE+AS+IA +HL +I+ KFEFS+ + Sbjct: 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|B4FS49|B4FS49_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 535
Score = 255 bits (652), Expect = 8e-67 Identities = 137/175 (78%), Positives = 144/175 (82%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVARILRTSLGPKG DKMLQSPDGDV ITNDGATILEQMDVDNQI KLMVELSRSQD E Sbjct: 38 KAVARILRTSLGPKGADKMLQSPDGDVIITNDGATILEQMDVDNQIAKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIR+AEGYEMASK+A +HL I++KFEFS+ + Sbjct: 98 IGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASKVAFDHLERISEKFEFSADN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIVNRCKR LAEIAVKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRALAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
>tr|A9TJ27|A9TJ27_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170350 PE=3 SV=1 Length = 535
Score = 251 bits (641), Expect = 2e-65 Identities = 134/175 (76%), Positives = 144/175 (82%) Frame = -1
Query: 526 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCE 347 KAVAR+LRTSLGP GMDKMLQSPDGDVTITNDGATILEQM+++NQIGKLMVELSRSQD E Sbjct: 38 KAVARVLRTSLGPNGMDKMLQSPDGDVTITNDGATILEQMEIENQIGKLMVELSRSQDYE 97
Query: 346 IGDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLD 167 IGD GIHPIR+AEGYEMASK+AVE+L+ I Q FEFS + Sbjct: 98 IGDGTTGVVVLAGALLEQAEVLLERGIHPIRVAEGYEMASKLAVENLTRIGQTFEFSPDN 157
Query: 166 IEPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 IEPLVQTCMTTLSSKIV RCKR+LAEIAVKAVLAVADLER DVNLDLIKVEGKVG Sbjct: 158 IEPLVQTCMTTLSSKIVGRCKRQLAEIAVKAVLAVADLERSDVNLDLIKVEGKVG 212
>tr|A9PAT0|A9PAT0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 535
Score = 250 bits (639), Expect = 3e-65 Identities = 133/174 (76%), Positives = 143/174 (82%) Frame = -1
Query: 523 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIGKLMVELSRSQDCEI 344 AV+RILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI KL+VELSRSQD EI Sbjct: 39 AVSRILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLLVELSRSQDYEI 98
Query: 343 GDXXXXXXXXXXXXXXXXXXXXXXGIHPIRIAEGYEMASKIAVEHLSNIAQKFEFSSLDI 164 GD GIHPIR+AEGYE AS+IAVEHL I+QK++F ++ Sbjct: 99 GDGTTGVVVLAGALLEQSQKLLERGIHPIRVAEGYETASRIAVEHLEKISQKYDFGVNNM 158
Query: 163 EPLVQTCMTTLSSKIVNRCKRKLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 2 EPLVQTCMTTLSSKIVNRCKR LAEI+VKAVLAVADLERKDVNLDLIKVEGKVG Sbjct: 159 EPLVQTCMTTLSSKIVNRCKRSLAEISVKAVLAVADLERKDVNLDLIKVEGKVG 212
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