BP915142 |
Clone id |
YMU001_000067_A05 |
Library |
YMU01 |
Length |
579 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000067_A05. |
Accession |
BP915142 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2509Contig1 |
Sequence |
CAAACAAAAATTATGAGTTAGTAAGCCCTAGGCAAAACAGTGTGCCAGTTCTCGCAGACG ACAACCCAACTTTCTATAGATATCTAAGGGCTTACTGTTCAAGGTCCATGGTATCATGCT CTCTTCATAGGATCATGCACCAAGTGTGAAGCCCAAAGATTTCTTCAAACGATGATCTAA TCCCCTTACTTTTGTGATGAAACTCTCTCCTCAAGCCGGCGTATTGCATCACCGACTGCA TCATGATCTGAAATACTCTCTTGTTGCTCATGCTCAGCATCTGGCTCGTCTGTTACCACA AATTTATCAACAGTAGACTGAAGCACACCTAGAGGTATTCCAAATGTTACACCAATTATT GAACCTAACAAAGCTGATCGCAATCGCCATTTTATAGAACCAGGCAGCATTAAGCCACCA GTGGCCGCTGTCACGCCTCCAGCTGCCGCAACATTGAGATAGTCACGTGTGTTGCGTCTA AGTGCCATATACTGTTCAGTGGCACAATATAAACCGGTAAATACTCCAAGTTTAGCACCC CCCATGACAGTCCCTCGAGCTACCCTTAAAACCTTCTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P72752 |
Definition |
sp|P72752|Y2009_SYNY3 Thylakoid membrane protein ssl2009 OS=Synechocystis sp. (strain PCC 6803) |
Align length |
61 |
Score (bit) |
31.2 |
E-value |
3.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T6F5 |
Definition |
tr|A9T6F5|A9T6F5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
132 |
Score (bit) |
79.0 |
E-value |
2.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915142|Adiantum capillus-veneris mRNA, clone: YMU001_000067_A05. (579 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T6F5|A9T6F5_PHYPA Predicted protein OS=Physcomitrella paten... 79 2e-13 tr|A7PCX7|A7PCX7_VITVI Chromosome chr17 scaffold_12, whole genom... 78 4e-13 tr|B7FJT8|B7FJT8_MEDTR Putative uncharacterized protein OS=Medic... 75 3e-12 tr|Q84K84|Q84K84_ARATH Putative uncharacterized protein At5g6300... 74 8e-12 tr|B6T3A5|B6T3A5_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|Q5NBF6|Q5NBF6_ORYSJ Putative uncharacterized protein P0693B08... 64 8e-09 tr|B8AC97|B8AC97_ORYSI Putative uncharacterized protein OS=Oryza... 64 8e-09 tr|A2ZRN4|A2ZRN4_ORYSJ Putative uncharacterized protein OS=Oryza... 64 8e-09 tr|Q9FM52|Q9FM52_ARATH Similarity to unknown protein OS=Arabidop... 57 6e-07 tr|Q00TI9|Q00TI9_OSTTA [S] KOG4608 Uncharacterized conserved pro... 43 0.011 tr|A4S920|A4S920_OSTLU Predicted protein OS=Ostreococcus lucimar... 43 0.011
>tr|A9T6F5|A9T6F5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168337 PE=4 SV=1 Length = 354
Score = 79.0 bits (193), Expect = 2e-13 Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 8/132 (6%) Frame = -2
Query: 575 KVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPGS 396 KVLR+ARGTV+GGAKLG F L+ + +A+ R D LN L LPGS Sbjct: 80 KVLRIARGTVLGGAKLGAFVALFSGIQHGLAVHRGNHDALNTVAAGGVTGGTFSLTLPGS 139
Query: 395 IKWRLRSALLGSIIGVTFGIPLGVLQSTVDKFVVTDEPDAEHE--------QQESISDHD 240 + R+ SA +G+++G +PLG+LQS ++ + + E QQ + Sbjct: 140 LLTRISSAAVGTLLGGFLALPLGLLQSNLEAELKPVQEQEAREPQLIDGGIQQLKYKEGV 199
Query: 239 AVGDAIRRLEER 204 V IRRLE R Sbjct: 200 GVDAVIRRLESR 211
>tr|A7PCX7|A7PCX7_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016053001 PE=4 SV=1 Length = 169
Score = 77.8 bits (190), Expect = 4e-13 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RV RG+++GG +LG+FT + + + A +R D N GL++PG Sbjct: 42 KRFIRVTRGSIVGGVRLGMFTAAFYTLQNFFAEKRGVHDVFNIAGAGSLTAATFGLIMPG 101
Query: 398 SIKWRLRSALLGSIIGVTFGIPLG----VLQSTVDKFVVTDEPDAEHEQQESISDHDAVG 231 SI+WR R+ LLGS++G G PLG L T ++ + PD++ Q VG Sbjct: 102 SIRWRARNVLLGSVLGAALGFPLGWAHLKLLETANEGRLAAYPDSDQIGQAK----GGVG 157
Query: 230 DAIRRLEERVS 198 AI RLE +++ Sbjct: 158 AAIDRLEGKLN 168
>tr|B7FJT8|B7FJT8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 203
Score = 74.7 bits (182), Expect = 3e-12 Identities = 41/129 (31%), Positives = 67/129 (51%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RV RG ++GG +LG+FT + + +A +R D N GL++PG Sbjct: 78 KRFIRVTRGALVGGVRLGMFTAAFYNIQNLLAEKRGVHDVFNVVGAGSATASAFGLIMPG 137
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQSTVDKFVVTDEPDAEHEQQESISDHDAVGDAIR 219 S +WR R+ LGS++G F PLG + + + + +E A H Q + V AI Sbjct: 138 SFRWRARNMALGSVLGAAFCFPLGWIHLKMVE-IANEENLAAHSDQREVK--GGVSAAIE 194
Query: 218 RLEERVSSQ 192 RLEE ++ + Sbjct: 195 RLEENLNKK 203
>tr|Q84K84|Q84K84_ARATH Putative uncharacterized protein At5g63000 OS=Arabidopsis thaliana GN=At5g63000 PE=2 SV=1 Length = 201
Score = 73.6 bits (179), Expect = 8e-12 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RV RG+++GG +LG+FT + + + ++A R D N GL++PG Sbjct: 77 KRFIRVTRGSLIGGMRLGMFTASFFSLQNFLAETRGVHDVFNVVGAGSATAAVFGLIMPG 136
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ-STVDKFVVTDEPDAEHEQQESISDHDAVGDAI 222 S+ WR R+ LLGS++G T PLG +Q + K + D H + + VG AI Sbjct: 137 SLAWRARNVLLGSVLGATVCFPLGWVQLKLMKKANEGNNVDTGHHGEVT----SGVGAAI 192
Query: 221 RRLEERV 201 RLE+++ Sbjct: 193 ERLEQQL 199
>tr|B6T3A5|B6T3A5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 229
Score = 64.7 bits (156), Expect = 4e-09 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RVA+G+++GG +LG+FT + + + R D N GL+LPG Sbjct: 100 KRFIRVAKGSLVGGVRLGMFTATFFGIQNLLIDTRGVHDVFNIAAAGSATAAAFGLILPG 159
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ----STVDKFVVTDEPDAEHEQQESISDHDAVG 231 S+ WR R+ L+GS +G PLG +Q + + +P + + E + VG Sbjct: 160 SMMWRARNVLVGSALGAGICYPLGWVQLKLAEKANLEIANSKPSS--DLTEGKENQSRVG 217
Query: 230 DAIRRLE 210 AI RLE Sbjct: 218 AAIERLE 224
>tr|Q5NBF6|Q5NBF6_ORYSJ Putative uncharacterized protein P0693B08.11 (Os01g0271000 protein) (Putative uncharacterized protein P0667A10.31) OS=Oryza sativa subsp. japonica GN=P0693B08.11 PE=4 SV=1 Length = 223
Score = 63.5 bits (153), Expect = 8e-09 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RVA+G+++GG +LG+FT + + + +R D N GL+LPG Sbjct: 95 KRFIRVAKGSLVGGVRLGMFTATFFGIQNLLIEKRGVHDVFNIAGAGSATAAAFGLILPG 154
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ-STVDKFVVTDEPDAEHEQQESISDHDAVGDAI 222 S WR R+ L+GS +G PLG +Q +K + + E + VG AI Sbjct: 155 SPMWRARNVLVGSALGAGVCFPLGWIQLKLAEKANLEMASSKPTDLVEEQGNQSGVGAAI 214
Query: 221 RRL 213 RL Sbjct: 215 ERL 217
>tr|B8AC97|B8AC97_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01342 PE=4 SV=1 Length = 223
Score = 63.5 bits (153), Expect = 8e-09 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RVA+G+++GG +LG+FT + + + +R D N GL+LPG Sbjct: 95 KRFIRVAKGSLVGGVRLGMFTATFFGIQNLLIEKRGVHDVFNIAGAGSATAAAFGLILPG 154
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ-STVDKFVVTDEPDAEHEQQESISDHDAVGDAI 222 S WR R+ L+GS +G PLG +Q +K + + E + VG AI Sbjct: 155 SPMWRARNVLVGSALGAGVCFPLGWIQLKLAEKANLEMASSKPTDLVEEQGNQSGVGAAI 214
Query: 221 RRL 213 RL Sbjct: 215 ERL 217
>tr|A2ZRN4|A2ZRN4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001206 PE=4 SV=1 Length = 235
Score = 63.5 bits (153), Expect = 8e-09 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RVA+G+++GG +LG+FT + + + +R D N GL+LPG Sbjct: 107 KRFIRVAKGSLVGGVRLGMFTATFFGIQNLLIEKRGVHDVFNIAGAGSATAAAFGLILPG 166
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ-STVDKFVVTDEPDAEHEQQESISDHDAVGDAI 222 S WR R+ L+GS +G PLG +Q +K + + E + VG AI Sbjct: 167 SPMWRARNVLVGSALGAGVCFPLGWIQLKLAEKANLEMASSKPTDLVEEQGNQSGVGAAI 226
Query: 221 RRL 213 RL Sbjct: 227 ERL 229
>tr|Q9FM52|Q9FM52_ARATH Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 263
Score = 57.4 bits (137), Expect = 6e-07 Identities = 30/87 (34%), Positives = 49/87 (56%) Frame = -2
Query: 578 EKVLRVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPG 399 ++ +RV RG+++GG +LG+FT + + + ++A R D N GL+ Sbjct: 109 KRFIRVTRGSLIGGMRLGMFTASFFSLQNFLAETRGVHDVFNVVGAGSATAAVFGLI--R 166
Query: 398 SIKWRLRSALLGSIIGVTFGIPLGVLQ 318 S+ WR R+ LLGS++G T PLG +Q Sbjct: 167 SLAWRARNVLLGSVLGATVCFPLGWVQ 193
>tr|Q00TI9|Q00TI9_OSTTA [S] KOG4608 Uncharacterized conserved protein OS=Ostreococcus tauri GN=Ot17g01000 PE=4 SV=1 Length = 211
Score = 43.1 bits (100), Expect = 0.011 Identities = 25/90 (27%), Positives = 39/90 (43%) Frame = -2
Query: 566 RVARGTVMGGAKLGVFTGLYCATEQYMALRRNTRDYLNXXXXXXXXXXXXGLMLPGSIKW 387 R T + G +LG F ++ AT + R RD N G+ +PG + Sbjct: 68 RAISDTTLHGVRLGSFVSVFSATRLALESTREIRDMWNVVGAGVVTSSLTGMAIPGPLSV 127
Query: 386 RLRSALLGSIIGVTFGIPLGVLQSTVDKFV 297 RLR A LG +G +PLG +++ + Sbjct: 128 RLRGAALGVAVGGAATLPLGYCLQELERLL 157
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