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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915144
Clone id YMU001_000067_A07
Library
Length 184
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGAAGCTGCAGTAAACTCGATCGCCGAGGATATCCACTGTGATGCCCAATCAAAAACCTC
TGCTTCAGCATTCATCATCAAACCGAGCGGTGTTATTGTTACATAGCCTTCACTCAAAGC
TCCGAAGTCGAACTGACTATTCATGCTCCCAATTTCAGCTTCTACAGTATCATTCAGAAA
ATAT
■■Homology search results ■■ -
sp_hit_id A7MJ60
Definition sp|A7MJ60|SURE_ENTS8 Multifunctional protein surE OS=Enterobacter sakazakii (strain ATCC BAA-894)
Align length 36
Score (bit) 34.3
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915144|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_A07.
         (171 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7MJ60|SURE_ENTS8 Multifunctional protein surE OS=Enterobacte...    34   0.20 
sp|A1S4E2|SURE_SHEAM 5'-nucleotidase surE OS=Shewanella amazonen...    33   0.44 
sp|Q5QUC6|SURE_IDILO 5'-nucleotidase surE OS=Idiomarina loihiens...    33   0.44 
sp|Q3YYB8|SURE_SHISS Multifunctional protein surE OS=Shigella so...    33   0.58 
sp|Q83JY2|SURE_SHIFL Multifunctional protein surE OS=Shigella fl...    33   0.58 
sp|Q0T1H5|SURE_SHIF8 Multifunctional protein surE OS=Shigella fl...    33   0.58 
sp|Q32CI6|SURE_SHIDS Multifunctional protein surE OS=Shigella dy...    33   0.58 
sp|Q31XA6|SURE_SHIBS Multifunctional protein surE OS=Shigella bo...    33   0.58 
sp|P66881|SURE_SALTY Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|P66882|SURE_SALTI Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|A9N2D0|SURE_SALPB Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|Q5PEG4|SURE_SALPA Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|Q57KJ7|SURE_SALCH Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|A9MF31|SURE_SALAR Multifunctional protein surE OS=Salmonella ...    33   0.58 
sp|Q1R7U7|SURE_ECOUT Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|P0A840|SURE_ECOLI Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|B1IUT5|SURE_ECOLC Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|P0A841|SURE_ECOL6 Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|Q0TEB4|SURE_ECOL5 Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|A1AET8|SURE_ECOK1 Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|A8A3M3|SURE_ECOHS Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|P0A842|SURE_ECO57 Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|A7ZQI8|SURE_ECO24 Multifunctional protein surE OS=Escherichia...    33   0.58 
sp|Q15P28|SURE_PSEA6 5'-nucleotidase surE OS=Pseudoalteromonas a...    32   0.98 
sp|A8ANV8|SURE_CITK8 Multifunctional protein surE OS=Citrobacter...    32   0.98 
sp|Q086A5|SURE_SHEFN 5'-nucleotidase surE OS=Shewanella frigidim...    31   1.7  
sp|O29320|SURE_ARCFU 5'-nucleotidase surE OS=Archaeoglobus fulgi...    31   1.7  
sp|A4VJV2|SURE_PSEU5 5'-nucleotidase surE OS=Pseudomonas stutzer...    31   2.2  
sp|Q9JYP8|SURE_NEIMB 5'-nucleotidase surE OS=Neisseria meningiti...    31   2.2  
sp|A9M0S4|SURE_NEIM0 5'-nucleotidase surE OS=Neisseria meningiti...    31   2.2  

>sp|A7MJ60|SURE_ENTS8 Multifunctional protein surE OS=Enterobacter
           sakazakii (strain ATCC BAA-894) GN=surE PE=3 SV=1
          Length = 253

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSA 22
           DF A+ EGYV++TPL + + A +   D  ++W+SSA
Sbjct: 213 DFAAVDEGYVSVTPLHVDLTAHS-AQDVVTRWLSSA 247


>sp|A1S4E2|SURE_SHEAM 5'-nucleotidase surE OS=Shewanella amazonensis
           (strain ATCC BAA-1098 / SB2B) GN=surE PE=3 SV=1
          Length = 248

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWI 31
           DFGA++EGYV+ITPL + + A +++ +  + WI
Sbjct: 214 DFGAVAEGYVSITPLTVDLTAHSQL-NALANWI 245


>sp|Q5QUC6|SURE_IDILO 5'-nucleotidase surE OS=Idiomarina loihiensis
           GN=surE PE=3 SV=1
          Length = 250

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAE---VFDWASQ 37
           DF A+ EGY++ITPL L M A+     + DW  Q
Sbjct: 215 DFTAIHEGYISITPLSLDMTAQRHTDTLTDWLEQ 248


>sp|Q3YYB8|SURE_SHISS Multifunctional protein surE OS=Shigella
           sonnei (strain Ss046) GN=surE PE=3 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV+ITPL + + A +   D  S W++S
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q83JY2|SURE_SHIFL Multifunctional protein surE OS=Shigella
           flexneri GN=surE PE=3 SV=2
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV+ITPL + + A +   D  S W++S
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q0T1H5|SURE_SHIF8 Multifunctional protein surE OS=Shigella
           flexneri serotype 5b (strain 8401) GN=surE PE=3 SV=2
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV+ITPL + + A +   D  S W++S
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|Q32CI6|SURE_SHIDS Multifunctional protein surE OS=Shigella
           dysenteriae serotype 1 (strain Sd197) GN=surE PE=3 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV+ITPL + + A +   D  S W++S
Sbjct: 213 DFAAVDEGYVSITPLRVDLTAHS-AQDVVSDWLNS 246


>sp|Q31XA6|SURE_SHIBS Multifunctional protein surE OS=Shigella
           boydii serotype 4 (strain Sb227) GN=surE PE=3 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV+ITPL + + A +   D  S W++S
Sbjct: 213 DFAAVDEGYVSITPLHVDLTAHS-AQDVVSDWLNS 246


>sp|P66881|SURE_SALTY Multifunctional protein surE OS=Salmonella
           typhimurium GN=surE PE=3 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV++TPL + + A +   D  S W+ S
Sbjct: 213 DFAAVDEGYVSVTPLHVDLTAHS-AHDVVSDWLDS 246


>sp|P66882|SURE_SALTI Multifunctional protein surE OS=Salmonella
           typhi GN=surE PE=3 SV=1
          Length = 253

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWISS 25
           DF A+ EGYV++TPL + + A +   D  S W+ S
Sbjct: 213 DFAAVDEGYVSVTPLHVDLTAHS-AHDVVSDWLDS 246
tr_hit_id B8LK94
Definition tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 49
Score (bit) 51.6
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915144|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_A07.
         (171 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea...    52   2e-05
tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.009
tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome ...    43   0.009
tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Popul...    40   0.075
tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1          38   0.28 
tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1          37   0.63 
tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana G...    36   0.83 
tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized prote...    36   0.83 
tr|A3WM66|A3WM66_9GAMM SurE OS=Idiomarina baltica OS145 GN=OS145...    35   2.4  
tr|Q7XB62|Q7XB62_ORYSJ Os07g0204500 protein OS=Oryza sativa subs...    33   7.0  
tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequen...    33   7.0  
tr|B8B887|B8B887_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|B7E331|B7E331_ORYSJ cDNA clone:001-019-B07, full insert seque...    33   7.0  
tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|A2WUB4|A2WUB4_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|B6I6D4|B6I6D4_ECOSE Survival protein OS=Escherichia coli (str...    33   9.2  
tr|B5Z3A6|B5Z3A6_ECO5E Multifunctional protein SurE OS=Escherich...    33   9.2  
tr|B5RDQ0|B5RDQ0_SALG2 Stationary-phase survival protein OS=Salm...    33   9.2  
tr|B5QW15|B5QW15_SALEP Acid phosphatase surE OS=Salmonella enter...    33   9.2  
tr|B5FTS2|B5FTS2_SALDC 5'/3'-nucleotidase SurE OS=Salmonella dub...    33   9.2  
tr|B5F408|B5F408_SALA4 5'/3'-nucleotidase SurE OS=Salmonella ago...    33   9.2  
tr|B5BEY1|B5BEY1_SALPK Stationary-phase survival protein OS=Salm...    33   9.2  
tr|B4TTV8|B4TTV8_SALSV 5'/3'-nucleotidase SurE OS=Salmonella sch...    33   9.2  
tr|B4TFW4|B4TFW4_SALHS 5'/3'-nucleotidase SurE OS=Salmonella hei...    33   9.2  
tr|B4T454|B4T454_SALNS 5'/3'-nucleotidase SurE OS=Salmonella new...    33   9.2  
tr|B2TZI7|B2TZI7_SHIB3 Multifunctional protein SurE OS=Shigella ...    33   9.2  
tr|B1XCS0|B1XCS0_ECODH Broad specificity 5'(3')-nucleotidase and...    33   9.2  
tr|B1LQ64|B1LQ64_ECOSM Multifunctional protein SurE OS=Escherich...    33   9.2  
tr|B7N6X4|B7N6X4_ECOLX Broad specificity 5'(3')-nucleotidase and...    33   9.2  
tr|B7LXF6|B7LXF6_ECOLX Broad specificity 5'(3')-nucleotidase and...    33   9.2  

>tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = -1

Query: 162 EAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAIE 16
           E E G M+   D+GAL +G+VTITPLGL  NA+ +     + WI++AI+
Sbjct: 339 EHEHGEMDDDLDYGALEQGFVTITPLGLTCNAQLDTCTSVATWITTAID 387


>tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_213060 PE=4 SV=1
          Length = 114

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = -1

Query: 162 EAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWIS 28
           E E+G++    DFGAL +GYV+IT LGL  + EA       +W++
Sbjct: 63  EQELGAIEPDHDFGALQQGYVSITALGLDTHVEATTRAQVEKWVA 107


>tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034123001
           PE=4 SV=1
          Length = 384

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = -1

Query: 165 VEAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAIE 16
           V+ E   ++   DF AL  G+V +TPL L  + E+++   AS+W+++A++
Sbjct: 331 VDKEQEGLDEDLDFRALENGFVAVTPLSLSQHNESDIHTTASEWMNTALQ 380


>tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 394

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 165 VEAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAI 19
           ++ E+   +   DF A+  G+V ITPL L    E +    AS WISSA+
Sbjct: 342 LDKELEDTDEDLDFRAVENGFVAITPLSLSPRIEEDTHIAASDWISSAL 390


>tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
          Length = 418

 Score = 37.7 bits (86), Expect = 0.28
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -1

Query: 165 VEAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAI 19
           VE     ++   D  AL  G++++TPL +    E E+   AS W+S+A+
Sbjct: 341 VEKRYEGLDEDIDLRALENGFISVTPLNVHGQVELEIGATASDWLSAAV 389


>tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
          Length = 401

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 165 VEAEIGSMNSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAI 19
           VE +   ++   D  AL  G+V++TPL +    E E+   AS W+S+A+
Sbjct: 334 VERQHQGLDEDTDLRALENGFVSVTPLNVHGQVEPEIQAPASDWLSAAV 382


>tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana
           GN=F3N23.8 PE=4 SV=1
          Length = 359

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 141 NSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAI 19
           +   D  AL +G+V++TP  L+   ++E    AS+WIS A+
Sbjct: 315 DEDLDVKALEDGFVSVTPFSLLPKTDSETQAAASEWISKAL 355


>tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized protein
           At1g72880) OS=Arabidopsis thaliana GN=At1g72880 PE=2
           SV=1
          Length = 385

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 141 NSQFDFGALSEGYVTITPLGLMMNAEAEVFDWASQWISSAI 19
           +   D  AL +G+V++TP  L+   ++E    AS+WIS A+
Sbjct: 341 DEDLDVKALEDGFVSVTPFSLLPKTDSETQAAASEWISKAL 381


>tr|A3WM66|A3WM66_9GAMM SurE OS=Idiomarina baltica OS145
           GN=OS145_07272 PE=4 SV=1
          Length = 253

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWIS 28
           DF A+ EGYV+ITPL L M A+    D   QW++
Sbjct: 215 DFAAIHEGYVSITPLSLDMTAKRHQ-DTLDQWLA 247


>tr|Q7XB62|Q7XB62_ORYSJ Os07g0204500 protein OS=Oryza sativa subsp.
           japonica GN=P0431A02.28 PE=4 SV=1
          Length = 305

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 129 DFGALSEGYVTITPLGLMMNAEAEVFDWASQWIS 28
           D   L +GY+T+TPLG +  AEA+V  +    +S
Sbjct: 270 DHKCLVDGYITVTPLGALSRAEADVIPYYKACLS 303