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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915147
Clone id YMU001_000067_A10
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGTTTTTTTTTTTGTTAAAGGGGAGCTGCGTAGAGCGGAGCAATCAAGATGTGTAGGTC
TCTTCTTCTTCTTGTCTTGTCGCATAGATCTCTGAGGCGTCTTCCCATGCTGCAATGCAC
CTATGCATGTGATTGCTCTCTCTCTCTTCCCACGATGTTAAAATTCTCTTCTTCTCTCTC
TCTCACAGATGCGCAAGCGGCAGAACTCTCTCTGTCAGCCCTTCTGTTCCCATTCGCCTG
CAACAAAGAGCCCTGTCCCATTTTCCAGTGTCGGGGATAGCAAGAGCTGCTAGCCATCAT
GCACAAGCCCAACATGATTCAAACAGCCTGCTCTTCACTGTCTTGCAACACAACCATCCA
CAAACTGTCGCGTGCACCCCTGCTCAGCAACTGCGCACCAGAATGCTCTG
■■Homology search results ■■ -
sp_hit_id P87236
Definition sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein OS=Schizosaccharomyces pombe
Align length 34
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915147|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_A10.
         (393 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein ...    31   2.2  
sp|Q9TTD8|PROP1_CANFA Homeobox protein prophet of Pit-1 OS=Canis...    30   3.7  
sp|O75360|PROP1_HUMAN Homeobox protein prophet of Pit-1 OS=Homo ...    30   4.9  
sp|Q3LU38|PROP1_ALOBE Homeobox protein prophet of Pit-1 OS=Aloua...    30   4.9  
sp|Q69024|VGLB_GPCMV Glycoprotein B OS=Guinea pig cytomegaloviru...    29   6.4  
sp|Q3LU41|PROP1_THEGE Homeobox protein prophet of Pit-1 OS=Thero...    29   8.3  
sp|Q9V677|ECM29_DROME Proteasome-associated protein ECM29 homolo...    29   8.4  

>sp|P87236|MU154_SCHPO Meiotically up-regulated gene 154 protein
           OS=Schizosaccharomyces pombe GN=mug154 PE=1 SV=1
          Length = 316

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 161 LSHRCASGRTLSVSPSVPIRLQQRALSHFPVSGI 262
           L HR +S   L+ +P  PI LQ+R++ H   SGI
Sbjct: 262 LEHRSSSHDHLTSTPRTPIALQRRSVHHLHDSGI 295


>sp|Q9TTD8|PROP1_CANFA Homeobox protein prophet of Pit-1 OS=Canis
           familiaris GN=PROP1 PE=3 SV=1
          Length = 226

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = +1

Query: 166 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKQPALHCLATQPST 345
           ++ RK++ SL QP    SPAT S     S                F  P  H L +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPATFSGFLPESPACPYSYPTPPPPMTCFPHPYNHALPSQPST 181


>sp|O75360|PROP1_HUMAN Homeobox protein prophet of Pit-1 OS=Homo
           sapiens GN=PROP1 PE=1 SV=1
          Length = 226

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +1

Query: 166 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKQPALHCLATQPST 345
           ++ RK++ SL QP    SPA  S     S                F  P  H L +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPST 181


>sp|Q3LU38|PROP1_ALOBE Homeobox protein prophet of Pit-1 OS=Alouatta
           belzebul GN=PROP1 PE=3 SV=1
          Length = 226

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +1

Query: 166 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKQPALHCLATQPST 345
           ++ RK++ SL QP    SPAT S     S                F  P  H   +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPATFSGFLPESPAGPYSYTTPPPPVTCFPHPYSHAFPSQPST 181


>sp|Q69024|VGLB_GPCMV Glycoprotein B OS=Guinea pig cytomegalovirus
           (strain 22122 / ATCC VR682) GN=GB PE=3 SV=1
          Length = 901

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/77 (23%), Positives = 30/77 (38%)
 Frame = -1

Query: 243 WDRALCCRRMGTEGLTERVLPLAHL*EREKKRILTSWEERESNHMHRCIAAWEDASEIYA 64
           W      +  G+  L  R++P     ERE   ++  WE  + +++   +  WE       
Sbjct: 287 WSNYSILKDFGSRALEARIVPKMAFYERED--VVIGWEVNDQSNVTCEMILWETVDRAIR 344

Query: 63  TRQEEEETYTS*LLRST 13
           T  E    Y +  L ST
Sbjct: 345 TEYENAFHYVARTLTST 361


>sp|Q3LU41|PROP1_THEGE Homeobox protein prophet of Pit-1
           OS=Theropithecus gelada GN=PROP1 PE=3 SV=1
          Length = 226

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +1

Query: 166 SQMRKRQNSLCQPFCSHSPATKSPVPFSSVGDSKXXXXXXXXXXXFKQPALHCLATQPST 345
           ++ RK++ SL QP    SPA  S     S                F  P  H L +QPST
Sbjct: 122 AKQRKQERSLLQPLAHLSPAAFSSFLPESSACPYSYAPPPPPVTCFPHPYSHALPSQPST 181


>sp|Q9V677|ECM29_DROME Proteasome-associated protein ECM29 homolog
           OS=Drosophila melanogaster GN=CG8858 PE=1 SV=1
          Length = 1890

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 346 LWMVVLQDSEEQAV*IMLGLCMMASSSCYPRHWKMGQGSLLQANGNRRADRES 188
           L + +L D+ E  V I+  +  +  +SCYP ++   +  LL   G R + RE+
Sbjct: 463 LLLAMLLDNAESKVQIVQNVTSVFLTSCYPEYYAPARYLLLLIAGERNSLREN 515
tr_hit_id B4QWJ8
Definition tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans
Align length 46
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915147|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_A10.
         (393 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans GN=GD18627...    33   5.4  
tr|B0R9Z1|B0R9Z1_HALS3 Transducer protein car OS=Halobacterium s...    33   9.2  
tr|O93775|O93775_HALSA Car protein OS=Halobacterium salinarium G...    33   9.2  
tr|O06022|O06022_HALSA Soluble transducer protein HtH OS=Halobac...    33   9.2  
tr|Q9VHB0|Q9VHB0_DROME CG8273 OS=Drosophila melanogaster GN=CG82...    33   9.3  
tr|Q8IHA8|Q8IHA8_DROME AT18855p OS=Drosophila melanogaster GN=CG...    33   9.3  

>tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans GN=GD18627
           PE=4 SV=1
          Length = 899

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 217 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 80
           NG+R ADR   +  AS + R+E + + +    E+S+     S GRR
Sbjct: 309 NGHREADRSKGSESASTKSRQEHDLSDISLSDEESYLREKASNGRR 354


>tr|B0R9Z1|B0R9Z1_HALS3 Transducer protein car OS=Halobacterium
           salinarum (strain ATCC 29341 / DSM 671 / R1) GN=car PE=4
           SV=1
          Length = 452

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 144 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 46
           +T W ER S+HM   R  A  EDAS++++T +E E
Sbjct: 71  VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105


>tr|O93775|O93775_HALSA Car protein OS=Halobacterium salinarium
           GN=car PE=4 SV=1
          Length = 452

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 144 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 46
           +T W ER S+HM   R  A  EDAS++++T +E E
Sbjct: 71  VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105


>tr|O06022|O06022_HALSA Soluble transducer protein HtH
           OS=Halobacterium salinarium PE=4 SV=1
          Length = 451

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 144 LTSWEERESNHMH--RCIAAWEDASEIYATRQEEE 46
           +T W ER S+HM   R  A  EDAS++++T +E E
Sbjct: 71  VTHWNERFSDHMKMARSDALGEDASDVFSTAEESE 105


>tr|Q9VHB0|Q9VHB0_DROME CG8273 OS=Drosophila melanogaster GN=CG8273
           PE=1 SV=1
          Length = 874

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 217 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 80
           NG R ADR   +  AS + R+E++ + +    E+S+     S GRR
Sbjct: 284 NGQREADRLKGSESASTKSRQEQDLSDISLSDEESYLREKASNGRR 329


>tr|Q8IHA8|Q8IHA8_DROME AT18855p OS=Drosophila melanogaster
           GN=CG8273 PE=1 SV=1
          Length = 886

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 217 NGNRRADRESSAACASVREREEENFNIVGREREQSHA*VHCSMGRR 80
           NG R ADR   +  AS + R+E++ + +    E+S+     S GRR
Sbjct: 296 NGQREADRLKGSESASTKSRQEQDLSDISLSDEESYLREKASNGRR 341