BP915155
Clone id YMU001_000067_B08
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTGTTTTTTTTTACATGGAAAAAGCTTCATTAATAAGCTGAAATGTGAAAGTTTGTCAG
CATTCATGAGCGAGCAATCCAGTCAAGCCTATAATACATATCAAATAGCTGTCAACATTT
TGTCAAAATCAGATCTATCCCAAAGGTGCCTTGTTCATCATACGGTCTTTCAGAAAGCTT
GTCTAAAACTCATTAATTTGCTGCTTACAAAAATTCAGTAATCAGTTTTTCCTTGCACAA
TTGATCATGGGGGCCTACCCGCCAGTCAAAATTGCACTTCTATAACGGAGAATGCTGGTG
AAAATTGCTTACTAATCTCCCAAGGTAAAGACACCACTGCAATGTACAAAACTTCAAACC
CCTTACAAGTAGGCCGCCTTTGTCTGCACAGAGTAGCTCAACTACAAGGTTTCATTCTGG
CTCGTCGACTACAAGGTTTCATTGTATTATGAAGAACTAAGACTAAGT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915155|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B08.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9I8W1
Definition tr|Q9I8W1|Q9I8W1_RAJEG Ikaros OS=Raja eglanteria
Align length 110
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915155|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B08.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9I8W1|Q9I8W1_RAJEG Ikaros OS=Raja eglanteria PE=2 SV=1 35 1.9
tr|B4LDX7|B4LDX7_DROVI GJ13001 OS=Drosophila virilis GN=GJ13001 ... 34 3.2
tr|B3PEK8|B3PEK8_CELJU RHS Repeat family OS=Cellvibrio japonicus... 34 4.2

>tr|Q9I8W1|Q9I8W1_RAJEG Ikaros OS=Raja eglanteria PE=2 SV=1
Length = 500

Score = 35.0 bits (79), Expect = 1.9
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +3

Query: 30 INKLKCESLSAFMSEQSSQAYNTYQI------AVNILSKSDLSQRCLVHHTVFQKACLKL 191
I++L+C++ S + E+ SQ T+ + A+N L L R LV + +
Sbjct: 268 ISELQCDANSNY--EKESQMMQTHVLDQAINNAINYLGAESL--RPLVQTPAGSSEVIPV 323

Query: 192 INLLLTKIQ*SVFPCTIDHGGLPASQNCTSITENAGENCLLISQGKDTTA 341
++ +++P I H NC +I A EN +LIS+ K T+
Sbjct: 324 LS--------NMYPMQITHSDTHGHPNCATIQNGAVENLMLISKAKSQTS 365


>tr|B4LDX7|B4LDX7_DROVI GJ13001 OS=Drosophila virilis GN=GJ13001
PE=4 SV=1
Length = 412

Score = 34.3 bits (77), Expect = 3.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3

Query: 249 GGLPASQNCTSITENAGENCLLISQGKDTTAMYKTSNPLQ 368
GG P Q C + C +I++G M+KT+NP++
Sbjct: 89 GGFPVDQFCNHVQSMDSLECFIINEGSGLGRMFKTANPVR 128


>tr|B3PEK8|B3PEK8_CELJU RHS Repeat family OS=Cellvibrio japonicus
(strain Ueda107) GN=CJA_3310 PE=4 SV=1
Length = 2245

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +3

Query: 246 HGGLP---------ASQNCTSITENAGENCLLISQGKDTTAMYKTSNPLQVGRLCLH 389
HGG P + S++EN EN + I++ + K +NP Q G+L LH
Sbjct: 1123 HGGHPDTGYNLTINSGSRSASVSENISENSIAITKSDGKQWIAKLANPAQAGKLILH 1179