NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915157
Clone id YMU001_000067_B10
Library
Length 454
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAGACGTTCTCTGCAGCTTTATGTACAACCAGGCGACCAACATCAGACGTTCATTCAT
CTGCGGCCCTTAGGTTTATCACAAAAACAGCATGGCGTTGATTTGACATAGCAGGAGACG
GAGACACTGCTGTTCCGAGTGGATTGTAAATGTATCTCTTGTAGTTGTCAGGAGAGATCT
TTGTGGTGTGTAAACAAGGAATGGGCAAAGAAGACCATGGCAGTGATGCTTGTTCATTAG
CAGGTTCGGAGAAGGATGTAGTCAGCAGTACCAATGCAACATGTAGCTCTGTAGCTTTGC
CCCATGTGTTGCGTGCACTGGATGAAACTGAAGAGGAAAGAGTTCGTCGTATACAGAAAC
TCTTCAATTTTTTTGACACTGCCTACAAAGGCTATATAGATCATTTTGATATTGAAAAAG
GATTCAAATCGCTTGGAATTCCCAGCCAATACAA
■■Homology search results ■■ -
sp_hit_id Q9D0E5
Definition sp|Q9D0E5|CN143_MOUSE EF-hand domain-containing protein C14orf143 homolog OS=Mus musculus
Align length 58
Score (bit) 36.6
E-value 0.051
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915157|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B10.
         (454 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9D0E5|CN143_MOUSE EF-hand domain-containing protein C14orf14...    37   0.051
sp|Q9BUY7|CN143_HUMAN EF-hand domain-containing protein C14orf14...    35   0.15 
sp|Q6AXQ2|CN143_RAT EF-hand domain-containing protein C14orf143 ...    34   0.33 
sp|P29289|TNNC1_HOMAM Troponin C, isoform 1 OS=Homarus americanu...    32   1.3  
sp|P06707|TNNC1_PONLE Troponin C, isotype alpha OS=Pontastacus l...    31   2.2  
sp|Q9VJ26|EFHD_DROME EF-hand domain-containing protein CG10641 O...    31   2.8  
sp|P29290|TNNCA_HOMAM Troponin C, isoform 2A OS=Homarus american...    30   3.7  
sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier prot...    30   3.7  
sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier prot...    30   3.7  
sp|Q3SEK2|CATR6_PARTE Caltractin ICL1f OS=Paramecium tetraurelia...    30   3.7  
sp|B0CG96|METK_ACAM1 S-adenosylmethionine synthetase OS=Acaryoch...    30   3.8  
sp|Q09665|TNNC2_CAEEL Troponin C, isoform 2 OS=Caenorhabditis el...    30   4.8  
sp|Q3SEK0|CATR5_PARTE Caltractin ICL1e OS=Paramecium tetraurelia...    30   4.8  
sp|O94455|YFFE_SCHPO Uncharacterized calcium-binding protein C16...    29   8.2  
sp|Q8QL26|Y1070_SIRV1 Uncharacterized protein 1070 OS=Sulfolobus...    29   8.2  

>sp|Q9D0E5|CN143_MOUSE EF-hand domain-containing protein C14orf143
           homolog OS=Mus musculus PE=2 SV=1
          Length = 162

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +3

Query: 258 VVSSTNATCSSVALPHVLRALDETEEERVRR--IQKLFNFFDTAYKGYIDHFDIEKGF 425
           V+SS N   S V+L   L A+   +E R+ R  I+++F  FD  Y+G++   D ++ F
Sbjct: 63  VMSSVNPNTSGVSLEGFLSAVKRKKEARLYRNEIRQIFTAFDVHYRGFLTLEDFKRAF 120


>sp|Q9BUY7|CN143_HUMAN EF-hand domain-containing protein C14orf143
           OS=Homo sapiens GN=C14orf143 PE=2 SV=1
          Length = 163

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
 Frame = +3

Query: 174 EIFVVCKQG----MGKEDHGSDACSLAGSEKD------VVSSTNATCSSVALPHVLRALD 323
           E+F  C +     + +ED  +    L G +        V+SS N   S + L   L  + 
Sbjct: 25  EVFKACDEDHKGYLSREDFKTAVVMLFGYKPSKIEVDSVMSSINPNTSGILLEGFLNIVR 84

Query: 324 ETEEERVRR--IQKLFNFFDTAYKGYIDHFDIEKGFKSL 434
           + +E +  R  ++ +F  FDT Y+G++   D +K F+ +
Sbjct: 85  KKKEAQRYRNEVRHIFTAFDTYYRGFLTLEDFKKAFRQV 123


>sp|Q6AXQ2|CN143_RAT EF-hand domain-containing protein C14orf143
           homolog OS=Rattus norvegicus PE=2 SV=1
          Length = 162

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 258 VVSSTNATCSSVALPHVLRALDETEEERVRR--IQKLFNFFDTAYKGYIDHFDIEKGFKS 431
           V+SS N   S V+L   L  +   +E ++ R  I+ +F  FD  Y+G++   D ++ F  
Sbjct: 63  VMSSANPDTSGVSLEGFLNVVQRKKEAQLYRNEIRHIFTAFDVHYRGFLTLEDFKRAFSQ 122

Query: 432 LG--IPSQ 449
           +   +PS+
Sbjct: 123 VAPKLPSR 130


>sp|P29289|TNNC1_HOMAM Troponin C, isoform 1 OS=Homarus americanus
           PE=1 SV=1
          Length = 150

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 318 LDETEEERVRRIQKLFNFFDTAYKGYI 398
           +D  +E++V+ +QK FN FDT  KG+I
Sbjct: 1   MDTLDEDQVQALQKAFNSFDTDDKGFI 27


>sp|P06707|TNNC1_PONLE Troponin C, isotype alpha OS=Pontastacus
           leptodactylus PE=1 SV=1
          Length = 150

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 318 LDETEEERVRRIQKLFNFFDTAYKGYI 398
           +D  +EE+V  +QK F+ FDT  KG+I
Sbjct: 1   MDSLDEEQVSALQKAFDSFDTDSKGFI 27


>sp|Q9VJ26|EFHD_DROME EF-hand domain-containing protein CG10641
           OS=Drosophila melanogaster GN=CG10641 PE=2 SV=1
          Length = 217

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 324 ETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           E    +++  QK FN +DTA  G++D  +++   + LG P  +
Sbjct: 65  EFSRNQIKDYQKTFNTYDTARDGFLDLQELKFMMEKLGAPQTH 107


>sp|P29290|TNNCA_HOMAM Troponin C, isoform 2A OS=Homarus americanus
           PE=1 SV=1
          Length = 150

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 318 LDETEEERVRRIQKLFNFFDTAYKGYI 398
           +D  +EE++  +QK F+ FDT  KG+I
Sbjct: 1   MDSLDEEQIGALQKAFDSFDTDSKGFI 27


>sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier protein
           SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1
          Length = 467

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 333 EERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGI 440
           +ER +R+  +F+  D    G+ID  +I++ F++LGI
Sbjct: 75  QEREQRLLLMFHSLDRNQDGHIDVSEIQQSFRALGI 110


>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein
           SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2
          Length = 468

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 333 EERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGI 440
           +ER +R+  +F+  D    G+ID  +I++ F++LGI
Sbjct: 76  QEREQRLLLMFHSLDRNQDGHIDVSEIQQSFRALGI 111


>sp|Q3SEK2|CATR6_PARTE Caltractin ICL1f OS=Paramecium tetraurelia
           GN=Icl1f PE=3 SV=1
          Length = 183

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 327 TEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLG 437
           +E +    IQK+FN FD+   G+I   D+ K  K LG
Sbjct: 109 SERDSKADIQKVFNLFDSERAGFITLKDLRKVAKELG 145
tr_hit_id A7PA49
Definition tr|A7PA49|A7PA49_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera
Align length 52
Score (bit) 62.4
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915157|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B10.
         (454 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PA49|A7PA49_VITVI Chromosome chr14 scaffold_9, whole genome...    62   1e-08
tr|A5BED0|A5BED0_VITVI Putative uncharacterized protein OS=Vitis...    60   5e-08
tr|Q9FLS8|Q9FLS8_ARATH Peroxisomal Ca-dependent solute carrier-l...    59   1e-07
tr|Q9LY28|Q9LY28_ARATH Peroxisomal Ca-dependent solute carrier-l...    59   2e-07
tr|A7PHT1|A7PHT1_VITVI Chromosome chr17 scaffold_16, whole genom...    59   2e-07
tr|A9NX45|A9NX45_PICSI Putative uncharacterized protein OS=Picea...    58   2e-07
tr|Q9FI43|Q9FI43_ARATH Calcium-binding transporter-like protein ...    57   4e-07
tr|B8ADT7|B8ADT7_ORYSI Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|Q0E2Z9|Q0E2Z9_ORYSJ Os02g0201500 protein OS=Oryza sativa subs...    54   3e-06
tr|A3A494|A3A494_ORYSJ Putative uncharacterized protein OS=Oryza...    54   3e-06
tr|Q6Z790|Q6Z790_ORYSJ Putative Mcsc-pending-prov protein OS=Ory...    54   4e-06
tr|B8A0E7|B8A0E7_MAIZE Putative uncharacterized protein OS=Zea m...    52   1e-05
tr|Q69X19|Q69X19_ORYSJ Os06g0604500 protein OS=Oryza sativa subs...    52   1e-05
tr|A3BDD7|A3BDD7_ORYSJ Putative uncharacterized protein OS=Oryza...    50   6e-05
tr|B6TXR3|B6TXR3_MAIZE Calcium-binding mitochondrial carrier F55...    49   1e-04
tr|A9TF81|A9TF81_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.012
tr|B0EH12|B0EH12_ENTDI Myosin regulatory light chain, putative O...    39   0.17 
tr|Q0UPT2|Q0UPT2_PHANO Putative uncharacterized protein OS=Phaeo...    36   0.84 
tr|Q8I198|Q8I198_DROVI CG3880-PA OS=Drosophila virilis GN=CG3880...    36   1.1  
tr|B4LN47|B4LN47_DROVI GJ21272 OS=Drosophila virilis GN=GJ21272 ...    36   1.1  
tr|B4J4E2|B4J4E2_DROGR GH20355 OS=Drosophila grimshawi GN=GH2035...    36   1.1  
tr|A0ADU2|A0ADU2_STRAM Putative RhtB family transporter OS=Strep...    35   1.4  
tr|Q4WZU0|Q4WZU0_ASPFU Calcium dependent mitochondrial carrier p...    35   1.4  
tr|B0XUU2|B0XUU2_ASPFC Calcium dependent mitochondrial carrier p...    35   1.4  
tr|A1DID7|A1DID7_NEOFI Calcium dependent mitochondrial carrier p...    35   1.4  
tr|A9SSH1|A9SSH1_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.9  
tr|B4MP87|B4MP87_DROWI GK21667 OS=Drosophila willistoni GN=GK216...    35   1.9  
tr|B7Z5G9|B7Z5G9_HUMAN cDNA FLJ51529 OS=Homo sapiens PE=2 SV=1         35   1.9  
tr|B3KT10|B3KT10_HUMAN cDNA FLJ37421 fis, clone BRAWH2001239 OS=...    35   1.9  
tr|B4JBX6|B4JBX6_DROGR GH11598 OS=Drosophila grimshawi GN=GH1159...    35   2.5  

>tr|A7PA49|A7PA49_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037971001
           PE=3 SV=1
          Length = 470

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +3

Query: 297 LPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           + HVL AL ETEE+R +RI+ LFNFFD A  GY+D+  IE G  +L IP++Y
Sbjct: 1   MEHVLLALRETEEQREQRIRSLFNFFDAANAGYLDYAQIEAGLSALCIPAEY 52


>tr|A5BED0|A5BED0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022552 PE=3 SV=1
          Length = 496

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +3

Query: 291 VALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           V + HVL AL E++EER  RI+ LFNFFD+A  GY+D+  IE G  +L IP +Y
Sbjct: 26  VGMDHVLLALQESKEERDVRIRSLFNFFDSANLGYLDYAQIEGGLSALQIPPEY 79


>tr|Q9FLS8|Q9FLS8_ARATH Peroxisomal Ca-dependent solute carrier-like
           protein OS=Arabidopsis thaliana GN=At5g61810 PE=2 SV=1
          Length = 478

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +3

Query: 297 LPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           + HVL AL ET+E+R  RIQKLF FFD +  G++D   IEKG  SL IP +Y
Sbjct: 19  MEHVLVALRETKEKREIRIQKLFEFFDNSKLGFLDDTQIEKGLSSLSIPPKY 70


>tr|Q9LY28|Q9LY28_ARATH Peroxisomal Ca-dependent solute carrier-like
           protein OS=Arabidopsis thaliana GN=T2I1_30 PE=2 SV=1
          Length = 479

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +3

Query: 288 SVALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           S+ + HVL AL ET +ER  RI+ LF+FFD +  G++D+  IEKG  SL IP +Y
Sbjct: 17  SITMEHVLLALRETMDEREIRIRSLFDFFDNSNLGFLDYAQIEKGLASLQIPPEY 71


>tr|A7PHT1|A7PHT1_VITVI Chromosome chr17 scaffold_16, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018059001
           PE=3 SV=1
          Length = 469

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +3

Query: 297 LPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           + HVL AL E++EER  RI+ LFNFFD+A  GY+D+  IE G  +L IP +Y
Sbjct: 1   MDHVLLALQESKEERDVRIRSLFNFFDSANLGYLDYAQIEGGLSALQIPPEY 52


>tr|A9NX45|A9NX45_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 511

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = +3

Query: 294 ALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           +L HV+ AL ET+EER  RI+ LFNFFD    G++D+  IE+G ++L IP++Y
Sbjct: 42  SLEHVMLALRETKEERELRIRCLFNFFDAMNSGHLDNSQIERGLQALRIPAEY 94


>tr|Q9FI43|Q9FI43_ARATH Calcium-binding transporter-like protein
           OS=Arabidopsis thaliana GN=At5g51050 PE=3 SV=1
          Length = 487

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = +3

Query: 291 VALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIPSQY 452
           V++ HVL AL ET EER  RI+ LF+FFD+   GY+D   IEKG  +L IPS Y
Sbjct: 21  VSIDHVLLALRETREERDLRIRSLFSFFDSENVGYLDCAQIEKGLCALQIPSGY 74


>tr|B8ADT7|B8ADT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06277 PE=4 SV=1
          Length = 584

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = +3

Query: 240 AGSEKDVVSSTNATCSSVALP-----HVLRALDETEEERVRRIQKLFNFFDTAYKGYIDH 404
           A + +  V+     C +V  P     HVL AL ETE ER  RI+ +F FFD A +G++DH
Sbjct: 17  AAAAEVAVAGGGGGCGAVRKPAATMEHVLLALHETEAEREARIRAMFGFFDAAGRGHLDH 76

Query: 405 FDIEKGFKSLGIP 443
             IE G  +L +P
Sbjct: 77  AQIEAGLAALHLP 89


>tr|Q0E2Z9|Q0E2Z9_ORYSJ Os02g0201500 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0201500 PE=3 SV=1
          Length = 525

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = +3

Query: 288 SVALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIP 443
           +  + HVL AL ETE ER  RI+ +F FFD A +G++DH  IE G  +L +P
Sbjct: 38  AATMEHVLLALHETEAEREARIRAMFGFFDAAGRGHLDHAQIEAGLAALHLP 89


>tr|A3A494|A3A494_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005616 PE=3 SV=1
          Length = 516

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = +3

Query: 288 SVALPHVLRALDETEEERVRRIQKLFNFFDTAYKGYIDHFDIEKGFKSLGIP 443
           +  + HVL AL ETE ER  RI+ +F FFD A +G++DH  IE G  +L +P
Sbjct: 38  AATMEHVLLALHETEAEREARIRAMFGFFDAAGRGHLDHAQIEAGLAALHLP 89