BP915165 |
Clone id |
YMU001_000067_C08 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000067_C08. |
Accession |
BP915165 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGAGGCTCTTCACTGATAAAACGTGCGCTTGCTTACTGAACCTATCCATAATATTCCAG ATACCTTCATGTTTACCCTGAGTCTTCCGGAGGGCAAATGCAAAATCCATAGCTTTACTT TCCCATGGTCAAAATGGAATAGGTAAAGACTGAAGAAGTCCTCTCTCTTTGTGCCTATTA TACTTCAGTTTCTAACATATCAAACAAGTACTCACAAACTGGTCCACATCCTTCCGGAGC TGAGGTCATTAGAAGATATTCTTAACTGCACTTAAGTGTTGCCTCTACTCCTCTATCCCC AACAAAAGGAGGTTGTGACAGTCCATGAATACCTTTCGCCTTATAGCCTGTGTACAACAC AACATGAGTTTTTGCATCCAATAGCCATCCTTGAGAGAATATCCTGAAACTGTCTCCACT CTGGATTCTGTCAAATGTTACACCAAAATCCAGGTCTGAAACATATTGCTCGCGCATCTG ATCAAAGTCCTGATGGCACACTGCTGTGATCGCAGAGATCTCTGGCTTGCGAGATAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7LHG5 |
Definition |
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae |
Align length |
89 |
Score (bit) |
58.2 |
E-value |
3.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BRB4 |
Definition |
tr|A5BRB4|A5BRB4_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
79 |
Score (bit) |
77.0 |
E-value |
6.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915165|Adiantum capillus-veneris mRNA, clone: YMU001_000067_C08. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BRB4|A5BRB4_VITVI Putative uncharacterized protein OS=Vitis... 77 6e-13 tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus... 77 7e-13 tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus... 77 7e-13 tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus... 77 7e-13 tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|A5C4G3|A5C4G3_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer ... 75 2e-12 tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ... 74 4e-12 tr|A5BVT4|A5BVT4_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12 tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=... 74 5e-12 tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy... 74 5e-12 tr|Q5UM01|Q5UM01_FRAAN Putative integrase (Fragment) OS=Fragaria... 73 8e-12 tr|A5BZM7|A5BZM7_VITVI Putative uncharacterized protein OS=Vitis... 73 8e-12 tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein OS=Glycine max PE=4 SV=1 73 1e-11 tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 72 1e-11 tr|Q0DC29|Q0DC29_ORYSJ Os06g0493000 protein OS=Oryza sativa subs... 72 1e-11 tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ... 72 1e-11 tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po... 72 2e-11 tr|Q2QNF0|Q2QNF0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 72 2e-11 tr|Q2MCK3|Q2MCK3_CITSI Polyprotein (Fragment) OS=Citrus sinensis... 72 2e-11 tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 72 2e-11 tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 71 2e-11 tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 71 2e-11 tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein OSJNBa00... 71 2e-11 tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subs... 71 2e-11 tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 72 2e-11 tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 72 2e-11 tr|A5BU14|A5BU14_VITVI Putative uncharacterized protein OS=Vitis... 67 3e-11 tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=... 71 3e-11 tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 71 3e-11
>tr|A5BRB4|A5BRB4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006389 PE=4 SV=1 Length = 1387
Score = 77.0 bits (188), Expect = 6e-13 Identities = 33/79 (41%), Positives = 51/79 (64%) Frame = -2
Query: 239 LRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGI 60 ++KD+ QFV+ C IC ++K + GLLQ LPIP W++ MDF L +T+ K G+ Sbjct: 997 MKKDIAQFVANCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGV 1056
Query: 59 WNIMDRFSKQAHVLSVKSL 3 W I+DR +K H L++K++ Sbjct: 1057 WMIVDRLTKSTHFLAMKTI 1075
>tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1 Length = 1508
Score = 76.6 bits (187), Expect = 7e-13 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Frame = -2
Query: 401 YSLKDGYWMQK--LMLCCTQAIRRKVFMDCHNLLLLGIEE*RQHLSAVKNIF**PQLRKD 228 YS+ DG+ +K LM+ +R + H+ G R + +K++F L KD Sbjct: 1055 YSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKD 1114
Query: 227 VDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGIWNIM 48 V F+ C C + KY R GLLQ LPIP W+S AMDF L K+ GK + IW ++ Sbjct: 1115 VADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKSHGK-DAIWVVI 1173
Query: 47 DRFSKQAHVL 18 DR SK AH + Sbjct: 1174 DRLSKYAHFI 1183
>tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1 Length = 1508
Score = 76.6 bits (187), Expect = 7e-13 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Frame = -2
Query: 401 YSLKDGYWMQK--LMLCCTQAIRRKVFMDCHNLLLLGIEE*RQHLSAVKNIF**PQLRKD 228 YS+ DG+ +K LM+ +R + H+ G R + +K++F L KD Sbjct: 1055 YSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKD 1114
Query: 227 VDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGIWNIM 48 V F+ C C + KY R GLLQ LPIP W+S AMDF L K+ GK + IW ++ Sbjct: 1115 VADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKSHGK-DAIWVVI 1173
Query: 47 DRFSKQAHVL 18 DR SK AH + Sbjct: 1174 DRLSKYAHFI 1183
>tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus japonicus PE=4 SV=1 Length = 1508
Score = 76.6 bits (187), Expect = 7e-13 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Frame = -2
Query: 401 YSLKDGYWMQK--LMLCCTQAIRRKVFMDCHNLLLLGIEE*RQHLSAVKNIF**PQLRKD 228 YS+ DG+ +K LM+ +R + H+ G R + +K++F L KD Sbjct: 1055 YSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKD 1114
Query: 227 VDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGIWNIM 48 V F+ C C + KY R GLLQ LPIP W+S AMDF L K+ GK + IW ++ Sbjct: 1115 VADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKSHGK-DAIWVVI 1173
Query: 47 DRFSKQAHVL 18 DR SK AH + Sbjct: 1174 DRLSKYAHFI 1183
>tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041136 PE=4 SV=1 Length = 377
Score = 76.3 bits (186), Expect = 1e-12 Identities = 33/78 (42%), Positives = 51/78 (65%) Frame = -2
Query: 239 LRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGI 60 +++D+ QFV+ C IC ++K + GLLQ LPIP W++ MDF L +T+ K G+ Sbjct: 1 MKRDIAQFVANCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGV 60
Query: 59 WNIMDRFSKQAHVLSVKS 6 W I+DR +K AH L++K+ Sbjct: 61 WVIVDRLTKSAHFLAMKT 78
>tr|A5C4G3|A5C4G3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020888 PE=4 SV=1 Length = 893
Score = 75.9 bits (185), Expect = 1e-12 Identities = 33/78 (42%), Positives = 51/78 (65%) Frame = -2
Query: 239 LRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGI 60 +++D+ QFV+ C IC ++K + GLLQ LPIP W++ MDF L +T+ K G+ Sbjct: 535 MKRDIAQFVANCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIRLPRTRSKKNGV 594
Query: 59 WNIMDRFSKQAHVLSVKS 6 W I+DR +K AH L++K+ Sbjct: 595 WVIVDRLTKSAHFLAMKT 612
>tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer arietinum GN=pol PE=4 SV=1 Length = 655
Score = 75.1 bits (183), Expect = 2e-12 Identities = 36/80 (45%), Positives = 51/80 (63%) Frame = -2
Query: 245 PQLRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHE 66 P ++K V ++VSTCL C K K + G+LQ L IP W+S +MDF L KT+ K++ Sbjct: 358 PGMKKHVAEYVSTCLTCQKAKVEHQRPAGMLQPLDIPEWKWDSISMDFITGLPKTRRKND 417
Query: 65 GIWNIMDRFSKQAHVLSVKS 6 IW I+DR +K AH L V++ Sbjct: 418 SIWVIVDRLTKSAHFLPVRT 437
>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1 Length = 871
Score = 74.3 bits (181), Expect = 4e-12 Identities = 34/78 (43%), Positives = 47/78 (60%) Frame = -2
Query: 245 PQLRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHE 66 P ++KDV +FV+ CL C ++K G LQSLPIP WE MDF L ++Q H+ Sbjct: 556 PGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHD 615
Query: 65 GIWNIMDRFSKQAHVLSV 12 IW I+DR +K AH + + Sbjct: 616 AIWVIVDRLTKSAHFIPI 633
>tr|A5BVT4|A5BVT4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012650 PE=4 SV=1 Length = 829
Score = 74.3 bits (181), Expect = 4e-12 Identities = 40/106 (37%), Positives = 64/106 (60%) Frame = -2
Query: 344 IRRKVFMDCHNLLLLGIEE*RQHLSAVKNIF**PQLRKDVDQFVSTCLIC*KLKYNRHKE 165 IRR + CH+ G E R+ + +++ + PQ+R +V+ +V TCL+C + K + + Sbjct: 609 IRRNLIKKCHDTKWAGHPEQRRTRALLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQP 668
Query: 164 RGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGIWNIMDRFSKQA 27 RGLL+ LPI PW+S MDF L K++ ++ I ++DRFSK A Sbjct: 669 RGLLEPLPIAEHPWDSITMDFIIGLPKSE-DNDSIIVVVDRFSKYA 713
>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=OSJNBa0034E23.18 PE=4 SV=1 Length = 2447
Score = 73.9 bits (180), Expect = 5e-12 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Frame = -2
Query: 413 TVSGYSLKDGYWMQKLMLCC-TQAIRRKVFMDCHNLLLLGIEE*RQHLSAVKNIF**PQL 237 T + + + DG+ + LC ++R + + H L+G ++ + + F PQ+ Sbjct: 1168 TWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQM 1227
Query: 236 RKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGIW 57 R+DV +FV+ C C K K H GL LP+P PWE +MDF L +T+ + I+ Sbjct: 1228 RRDVGRFVARCATCQKAKSRLHPH-GLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIF 1286
Query: 56 NIMDRFSKQAHVL 18 ++DRFSK AH + Sbjct: 1287 VVVDRFSKMAHFI 1299
Score = 65.1 bits (157), Expect = 2e-09 Identities = 28/78 (35%), Positives = 48/78 (61%) Frame = -2
Query: 239 LRKDVDQFVSTCLIC*KLKYNRHKERGLLQSLPIPF*PWESKAMDFAFALRKTQGKHEGI 60 +++++ +FV+ C +C ++K + GLLQ L +P W+ MDF L KTQG ++ I Sbjct: 2048 MKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSI 2107
Query: 59 WNIMDRFSKQAHVLSVKS 6 W ++DR +K A + VK+ Sbjct: 2108 WVVVDRLTKVARFIPVKT 2125
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