BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915174|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_D06.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JIL9|NBN_RAT Nibrin OS=Rattus norvegicus GN=Nbn PE=1 SV=2         33   0.79 
sp|Q9KAG5|RGMG_BACHD Putative ribose/galactose/methyl galactosid...    31   3.1  

>sp|Q9JIL9|NBN_RAT Nibrin OS=Rattus norvegicus GN=Nbn PE=1 SV=2
          Length = 750

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
 Frame = +3

Query: 123 NSNTLLYTLGNTENTSRRYIIGKRYQHLLNTTKKHKEP*PNYLHSPQRLKGIGYCKDWGE 302
           NS  LL    N + TS +           NT  + K P  NY  SP +       KDW  
Sbjct: 393 NSRKLLQGTCNIKETSNQS--SNSNNAASNTLVRGKAP--NYQLSPMKCPAASKNKDWSS 448

Query: 303 TLRLN-------PYSRRRDKQSHHP*DHMCHS 377
             +LN       P SR+R++   +P    C S
Sbjct: 449 QQQLNSIKNYFQPCSRKRERDEENPEQSSCKS 480


>sp|Q9KAG5|RGMG_BACHD Putative ribose/galactose/methyl galactoside
           import ATP-binding protein OS=Bacillus halodurans
           GN=BH2322 PE=3 SV=1
          Length = 522

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 360 LMDDDFVYLDDENRGLALGFPPNLYNILFP*VSGGSA 250
           L + D ++LD+  RG+ +G     YN++F   S G A
Sbjct: 414 LKNPDILFLDEPTRGIDVGAKSEFYNLIFELASQGKA 450

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915174|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_D06.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KPF8|B6KPF8_TOXGO Syntaxin, putative OS=Toxoplasma gondii M...    35   1.8  
tr|A8XZ31|A8XZ31_CAEBR CBR-SRG-16 protein OS=Caenorhabditis brig...    34   3.1  
tr|A9IR20|A9IR20_BART1 Cytochrome C-type biogenesis protein OS=B...    33   9.1  
tr|A8WU00|A8WU00_CAEBR CBR-ABTS-3 protein OS=Caenorhabditis brig...    33   9.1  

>tr|B6KPF8|B6KPF8_TOXGO Syntaxin, putative OS=Toxoplasma gondii ME49
           GN=TGME49_009820 PE=4 SV=1
          Length = 534

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 163 FSVFPSVYRSVLLLLGFGPSWNLYLDSLFKSSAIINASRCFLSISIAP-YLFCIH 2
           FS FP V+R + L      S   +L S+F    II+ +RCF S+S  P  LF +H
Sbjct: 106 FSAFPPVFRHLWLFFAAPSSVRFFLFSVF----IISRARCFPSVSRLPNLLFSVH 156


>tr|A8XZ31|A8XZ31_CAEBR CBR-SRG-16 protein OS=Caenorhabditis
           briggsae GN=Cbr-srg-16 PE=4 SV=2
          Length = 576

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 16/47 (34%), Positives = 30/47 (63%)
 Frame = -3

Query: 217 VVFNKCWYLFPMMYLLEVFSVFPSVYRSVLLLLGFGPSWNLYLDSLF 77
           V+   C  ++PM Y  +V++ FP +   ++L++ FG +WNLYL  ++
Sbjct: 425 VLNRMCCVMWPMSYE-KVWNKFPILTVVLILIVPFGGTWNLYLGRMY 470


>tr|A9IR20|A9IR20_BART1 Cytochrome C-type biogenesis protein
           OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
           GN=cycK PE=4 SV=1
          Length = 666

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -3

Query: 223 FFVVFNKCWYLFPMMYLLEVFSVFPSVYRSVLLLLGFGPSWNLYLDSL 80
           FF VF + W++F ++  +     + +  R +L +LG G S  ++L SL
Sbjct: 425 FFAVFERLWFVFVLVATVCFILFYATSLRDILAVLGIGLSAFVFLGSL 472


>tr|A8WU00|A8WU00_CAEBR CBR-ABTS-3 protein OS=Caenorhabditis
           briggsae GN=Cbr-abts-3 PE=4 SV=2
          Length = 1016

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = -3

Query: 190 FPMMYLLEVFSVFPSVYRSVLLLLGFGPSWNLYLDSLFKSSAIIN 56
           FP++ + ++FS+ PS Y  V LLLGF  S+  ++D    +SAI+N
Sbjct: 768 FPLIQMADIFSLPPSGY-FVCLLLGFSLSFLFFIDQNI-TSAIVN 810