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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915186
Clone id YMU001_000067_E07
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAAATACTCTAGTAGCCACACCATTTACTATGTCTAGCTTTGATAATCGAAGGTGTGGTA
TAGCTTTTGGGTGTATGGTGGGTGTGAAAAATGTAATTTCTACCGGCCGAAAGGATACCA
ACTATACCACCCAAGTGCATTGCCCGTTCATTCAGTACGGGTGCGAGCATGTTGGCCAAG
GTGATCATTGAGGGGACAATATAATGTACTTTGGTTAGATCACGCCTTATGGCTTGTACT
CCACAAGCTCCCCTCATTCTTCCCGGCCTCCTCGCTCAAGAAATTCACGATTGCATTTCT
TAGTTGGGTAGAAAAGGAAGCACAAGAGCCCATCAAAGTCCCGTTAGTCCACTTCTGCTA
TCGACAAAAGCTCAAGGATGCAATTTCCCTCTCGATCTTATTCAACCAAGCTCCTCCTAC
CTTCAACCCTAAGTTGGAATCCGATAACTTCATTCTAGCTGTCATTGCATCTGGAAAAAC
ATCCCAAGATGTTCAGTC
■■Homology search results ■■ -
sp_hit_id A0KF84
Definition sp|A0KF84|HUTI_AERHH Imidazolonepropionase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)
Align length 35
Score (bit) 30.4
E-value 4.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915186|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_E07.
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0KF84|HUTI_AERHH Imidazolonepropionase OS=Aeromonas hydrophi...    30   4.7  
sp|Q6LXQ9|ENGB_METMP Probable GTP-binding protein engB OS=Methan...    30   4.7  
sp|P33413|DUR3_YEAST Urea active transporter OS=Saccharomyces ce...    30   6.1  
sp|A1VXU6|ARGC_CAMJJ N-acetyl-gamma-glutamyl-phosphate reductase...    30   8.0  

>sp|A0KF84|HUTI_AERHH Imidazolonepropionase OS=Aeromonas hydrophila
           subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=hutI
           PE=1 SV=2
          Length = 411

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 116 YQLYHPSALPVHSVRVRACWPR*SLRGQYNVLWLD 220
           Y L  P AL VH  R+ A  P   L+G Y   W D
Sbjct: 27  YGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQD 61


>sp|Q6LXQ9|ENGB_METMP Probable GTP-binding protein engB
           OS=Methanococcus maripaludis GN=engB PE=3 SV=1
          Length = 230

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +2

Query: 296 FLSWVEKEAQEPIKVPLVHFCYRQKLKDAISLSI 397
           F+  +EK+AQE IK  ++H  Y +  KDAI+ SI
Sbjct: 92  FMEGIEKKAQEKIKDEIIH--YVEDNKDAIAASI 123


>sp|P33413|DUR3_YEAST Urea active transporter OS=Saccharomyces
           cerevisiae GN=DUR3 PE=1 SV=2
          Length = 735

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 185 SLRGQYNVLWLDHALWLVLHKLPSFFPASSLKKFTIAFLSW 307
           +L G +  ++LD+  W   +K  S  PA+SLK + I  L+W
Sbjct: 261 NLIGNFGTVFLDNGYW---NKAISASPAASLKAYAIGGLAW 298


>sp|A1VXU6|ARGC_CAMJJ N-acetyl-gamma-glutamyl-phosphate reductase
           OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
           (strain 81-176) GN=argC PE=3 SV=1
          Length = 342

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 281 KFTIAFL---SWVEKEAQEPIKVPLVHFCYRQKLKDAISLSILFNQAPPTFNPKLESDNF 451
           K  I++L   S V +  Q+     L++ C+  K  D + L +LF   P  F+ KL ++N 
Sbjct: 27  KVEISYLGSSSSVGQNYQDLYPNTLLNLCFENKNLDELELDLLFLATPHEFSAKLLNENL 86

Query: 452 I 454
           +
Sbjct: 87  L 87
tr_hit_id A9RHX6
Definition tr|A9RHX6|A9RHX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 74
Score (bit) 37.0
E-value 0.52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915186|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_E07.
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RHX6|A9RHX6_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.52 
tr|B7K718|B7K718_9CHRO Putative uncharacterized protein OS=Cyano...    35   1.5  
tr|A9KNJ2|A9KNJ2_CLOPH Putative uncharacterized protein OS=Clost...    34   4.4  
tr|A8UXI8|A8UXI8_9AQUI Putative uncharacterized protein OS=Hydro...    34   4.4  
tr|A4AT33|A4AT33_9FLAO Putative secreted protein OS=Flavobacteri...    33   5.7  
tr|A1K5L7|A1K5L7_AZOSB Single-stranded-DNA-specific exonuclease ...    33   5.7  
tr|A4BC41|A4BC41_9GAMM Putative uncharacterized protein OS=Reine...    33   7.5  
tr|Q6DRL4|Q6DRL4_DANRE Putative uncharacterized protein OS=Danio...    33   9.7  
tr|Q9NWG3|Q9NWG3_HUMAN cDNA FLJ10043 fis, clone HEMBA1001085 OS=...    33   9.8  

>tr|A9RHX6|A9RHX6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_159226 PE=4 SV=1
          Length = 570

 Score = 37.0 bits (84), Expect = 0.52
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 203 NVLWLDHALWLVLHKLPSFF--PASSLKKFTIAFLSWVEKEAQEPIKVPLVHFCYRQKLK 376
           +V+W DHA+W ++++L  FF     +L     AF  W+    +  +K  L  F +R+ L 
Sbjct: 373 SVIWWDHAMWFMINRLELFFGDEYPTLTSKLAAFWIWISSSGKVAVKSHLT-FAFRRDLM 431

Query: 377 DAISLSILFNQAPP 418
               +    NQ  P
Sbjct: 432 LEGVIEFAHNQTGP 445


>tr|B7K718|B7K718_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7424 GN=PCC7424_4351 PE=4 SV=1
          Length = 184

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +1

Query: 241 PQAPLILPGLLAQEIHDCIS*LGRKGSTRAHQSPVSPLLLSTKAQGCNFPLDLIQPSSSY 420
           PQ+P+ LPG ++ + HDCI  +   G + A ++ +  L +        + + L +  SSY
Sbjct: 46  PQSPIALPGKISLDNHDCIHVILGLGVSLADEALILGLTMGNDTNTKEWQVKLFKFISSY 105

Query: 421 LQP 429
           L P
Sbjct: 106 LYP 108


>tr|A9KNJ2|A9KNJ2_CLOPH Putative uncharacterized protein
           OS=Clostridium phytofermentans (strain ATCC 700394 / DSM
           18823 / ISDg) GN=Cphy_2749 PE=3 SV=1
          Length = 135

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
 Frame = -3

Query: 97  ITFFTPTIHPKAIPHLRLSKL-------DIVNG 20
           +T FTP +H K IPH+R+ KL       D VNG
Sbjct: 22  LTVFTPAVHEKMIPHVRVEKLTRETFPFDYVNG 54


>tr|A8UXI8|A8UXI8_9AQUI Putative uncharacterized protein
          OS=Hydrogenivirga sp. 128-5-R1-1 GN=HG1285_08874 PE=4
          SV=1
          Length = 531

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 21 PFTMSSFDNRRCGIAFGC 74
          P T+ SFD++RCGI FGC
Sbjct: 9  PLTVKSFDSQRCGICFGC 26


>tr|A4AT33|A4AT33_9FLAO Putative secreted protein OS=Flavobacteriales
            bacterium HTCC2170 GN=FB2170_10111 PE=4 SV=1
          Length = 3828

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 23/80 (28%), Positives = 38/80 (47%)
 Frame = -1

Query: 345  NGTLMGSCASFSTQLRNAIVNFLSEEAGKNEGSLWSTSHKA*SNQSTLYCPLNDHLGQHA 166
            NG++ GS  ++S+ +       L   A  N+GS WS S +A   +  LY  +N+ L  + 
Sbjct: 2133 NGSVSGSAIAYSSPIDVPDSGILEIIARVNDGSDWSASTEASYAEMELY--INEFLASNV 2190

Query: 165  RTRTE*TGNALGWYSWYPFG 106
               T+ +G    W  +Y  G
Sbjct: 2191 TGITDESGANEDWIEFYNAG 2210


>tr|A1K5L7|A1K5L7_AZOSB Single-stranded-DNA-specific exonuclease
           OS=Azoarcus sp. (strain BH72) GN=recJ PE=4 SV=1
          Length = 563

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 15/75 (20%)
 Frame = -2

Query: 248 ACGVQAIRRDLTKVHYIVPSMITLANMLAPVLNERAMHL---------------GGIVGI 114
           A GV+A+R     VHY+VP  +TL   L P + E A  L                GI   
Sbjct: 89  AVGVRALRAFGADVHYLVPDRVTLGYGLTPAMVEIAARLEPDVLITVDNGIASVEGIAAA 148

Query: 113 LSAGRNYIFHTHHTP 69
            + G   I   HH P
Sbjct: 149 RAHGMATIITDHHLP 163


>tr|A4BC41|A4BC41_9GAMM Putative uncharacterized protein OS=Reinekea
           sp. MED297 GN=MED297_01855 PE=4 SV=1
          Length = 281

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +2

Query: 68  WVYGGCEKCNFYRPKGYQLYHPSALPVHSVRVRACWPR*SLRGQYNVLWLDHALWL 235
           WV  G +  +F+  K ++LYH         RVR CWP        ++LWL   L++
Sbjct: 131 WVGAGLK--DFFHAKLHRLYHHQLRLPEKARVRNCWPEALPFPDESLLWLPGRLYV 184


>tr|Q6DRL4|Q6DRL4_DANRE Putative uncharacterized protein OS=Danio
           rerio PE=2 SV=1
          Length = 1824

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +1

Query: 145 RSFSTGASMLAKVIIEGTI*CTLVRSRLMACTPQAPLILPGLLAQE 282
           +  STG   +   + EG + C+ V S L +CT Q  ++ P LLAQE
Sbjct: 380 KQLSTGGHAMLAEVSEGDVVCSAVLSVLSSCTAQITVLQP-LLAQE 424


>tr|Q9NWG3|Q9NWG3_HUMAN cDNA FLJ10043 fis, clone HEMBA1001085
           OS=Homo sapiens PE=2 SV=1
          Length = 157

 Score = 32.7 bits (73), Expect = 9.8
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 248 LPSFFPASSLKKFTIAFLSWVEKEAQEPIKVPLVHF 355
           LPSFFP +S   F+ A L++ E EA  P  VP   F
Sbjct: 92  LPSFFPTASGLSFSAATLTFSEAEAPSPTFVPPTFF 127