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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915192
Clone id YMU001_000067_F02
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTCATCATGACCAAAGTAAACTATTCCTATTGTCTTCTGATACGGCAGGAGT
ATTGTACAGTAGAACATCTATAAGAAGCCTGGAAGCGCTAGACAAGAAGCTGCACTTGCC
AGTTTATGTTTATGTAACGTACATCTGAGGAAGAGTAGACAAATCACATTTCTCCATGAA
TGAAGTGCATGCAAAAAGGCACTTAGTGACCGAAACCTATTGTCGAAAAACAACTGCGAT
ACCACTAGCTCAAAGTCAAAACCCTACTCTCTGCTTACATTAAAAGAGCTCACATTCTTT
GGAGTGGCAACAACCAACGGTGCATTGGGCGATACTGATGAAAAGCTGTCATGCATAAAT
TTGCTGTCCACAATCGACTCTTCTTTGGGTATAACTCTGTAGCAATAACAGCTTTTCAAA
CCTCGAGTTACTTGGTAGCACTCATGATTGCTCTCCTTCACTCTACGAGAATTCCATACA
ACTGTAAAATTGCCAACTGTTGCCACCAAATTGCGCTCCTGCCTG
■■Homology search results ■■ -
sp_hit_id P40781
Definition sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus
Align length 86
Score (bit) 112.0
E-value 8.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915192|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F02.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus GN=CY...   112   8e-25
sp|Q4FRN8|PUR9_PSYA2 Bifunctional purine biosynthesis protein pu...    32   1.3  
sp|Q555V7|VID27_DICDI VID27-like protein OS=Dictyostelium discoi...    31   3.9  
sp|Q6M7C6|DNAE2_CORGL Error-prone DNA polymerase OS=Corynebacter...    30   8.7  

>sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus
           GN=CYPRO4 PE=2 SV=1
          Length = 501

 Score =  112 bits (281), Expect = 8e-25
 Identities = 50/86 (58%), Positives = 72/86 (83%), Gaps = 2/86 (2%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG F+V+W+ +RVK S HECY+   GLKSCYCY+++ K+ESI++S FM+D 
Sbjct: 407 KQERHLVATVGKFSVIWDFQRVKNSGHECYRNQEGLKSCYCYKLMTKDESIIESLFMNDK 466

Query: 334 FSSV--SPNAPLVVATPKNVSSFNVS 263
           +++V  SP APLV+ATPK ++SF++S
Sbjct: 467 YAAVGDSPEAPLVMATPKKITSFSMS 492


>sp|Q4FRN8|PUR9_PSYA2 Bifunctional purine biosynthesis protein purH
           OS=Psychrobacter arcticus (strain DSM 17307 / 273-4)
           GN=purH PE=3 SV=1
          Length = 526

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +3

Query: 228 DTTSSKSKPYSLLTLKELTFFGVATTNGALGDTDEKLSCINLLST 362
           +  SSKSK  S+ T K+L   G A +   + DTD  L C+   ST
Sbjct: 232 ENNSSKSKQASIATAKQLQ--GKALSYNNIADTDAALECVKAFST 274


>sp|Q555V7|VID27_DICDI VID27-like protein OS=Dictyostelium
           discoideum GN=DDB_G0274813 PE=3 SV=1
          Length = 938

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQV 419
           + E +++ + G+F + WN R++K++  + YQ+
Sbjct: 873 QSETSILTSTGSFLITWNFRKIKQNILDVYQI 904


>sp|Q6M7C6|DNAE2_CORGL Error-prone DNA polymerase OS=Corynebacterium
           glutamicum GN=dnaE2 PE=3 SV=1
          Length = 1055

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 240 SKSKPYSLLTLKELTFFGVATTNGALGDTDEKL 338
           SK  P  +  L+   F G+  TNG +G+T EKL
Sbjct: 710 SKRSPERMAALRSRFFQGLKDTNGIVGETAEKL 742
tr_hit_id B6UCN7
Definition tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays
Align length 85
Score (bit) 122.0
E-value 1.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915192|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F02.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1           122   1e-26
tr|B4FNP4|B4FNP4_MAIZE Putative uncharacterized protein OS=Zea m...   122   1e-26
tr|A7P9J1|A7P9J1_VITVI Chromosome chr3 scaffold_8, whole genome ...   122   1e-26
tr|B6UDP8|B6UDP8_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1           121   2e-26
tr|B6UBL0|B6UBL0_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1           121   2e-26
tr|Q6K4M9|Q6K4M9_ORYSJ Os02g0789600 protein OS=Oryza sativa subs...   120   5e-26
tr|A3AC52|A3AC52_ORYSJ Putative uncharacterized protein OS=Oryza...   120   5e-26
tr|A2XAF1|A2XAF1_ORYSI Putative uncharacterized protein OS=Oryza...   120   5e-26
tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subs...   118   2e-25
tr|B8AIW2|B8AIW2_ORYSI Putative uncharacterized protein OS=Oryza...   118   2e-25
tr|O04394|O04394_SOLLC Dem protein OS=Solanum lycopersicum GN=de...   116   7e-25
tr|Q6VVW8|Q6VVW8_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=4...   115   1e-24
tr|Q6VVW7|Q6VVW7_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=2...   115   1e-24
tr|A9TTW4|A9TTW4_PHYPA Predicted protein OS=Physcomitrella paten...   115   1e-24
tr|A7NTV6|A7NTV6_VITVI Chromosome chr18 scaffold_1, whole genome...   115   2e-24
tr|A5AH24|A5AH24_VITVI Putative uncharacterized protein OS=Vitis...   115   2e-24
tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana GN=At...   114   4e-24
tr|Q9SZB7|Q9SZB7_ARATH Dem-like protein OS=Arabidopsis thaliana ...   111   2e-23
tr|B7FLV3|B7FLV3_MEDTR Putative uncharacterized protein OS=Medic...   109   7e-23
tr|A9U2M9|A9U2M9_PHYPA Predicted protein OS=Physcomitrella paten...   102   1e-20
tr|A9SNF7|A9SNF7_PHYPA Predicted protein OS=Physcomitrella paten...   102   1e-20
tr|A8J8I6|A8J8I6_CHLRE VID72-domain protein OS=Chlamydomonas rei...    48   3e-04
tr|Q5KGN3|Q5KGN3_CRYNE Cytoplasm protein, putative (Putative unc...    35   2.9  
tr|A0EF82|A0EF82_PARTE Chromosome undetermined scaffold_93, whol...    34   3.7  
tr|Q23H43|Q23H43_TETTH Putative uncharacterized protein OS=Tetra...    34   4.9  

>tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1
          Length = 655

 Score =  122 bits (306), Expect = 1e-26
 Identities = 58/85 (68%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG ++VVWN  +VK S+HECYQ   GLKSCYCY+VIPK+ESIV S+FMHD 
Sbjct: 568 KQERHLVATVGKYSVVWNFLQVKNSHHECYQYQEGLKSCYCYKVIPKDESIVASRFMHDK 627

Query: 334 FS-SVSPNAPLVVATPKNVSSFNVS 263
           +S S SP APLVVATP  V+SF++S
Sbjct: 628 YSVSDSPEAPLVVATPMKVTSFSIS 652


>tr|B4FNP4|B4FNP4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 456

 Score =  122 bits (306), Expect = 1e-26
 Identities = 58/85 (68%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG ++VVWN  +VK S+HECYQ   GLKSCYCY+VIPK+ESIV S+FMHD 
Sbjct: 369 KQERHLVATVGKYSVVWNFLQVKNSHHECYQYQEGLKSCYCYKVIPKDESIVASRFMHDK 428

Query: 334 FS-SVSPNAPLVVATPKNVSSFNVS 263
           +S S SP APLVVATP  V+SF++S
Sbjct: 429 YSVSDSPEAPLVVATPMKVTSFSIS 453


>tr|A7P9J1|A7P9J1_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036588001
           PE=4 SV=1
          Length = 481

 Score =  122 bits (305), Expect = 1e-26
 Identities = 56/87 (64%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG F+V+WN ++VK S+HECYQ  +GLKSCYCY+++ K+ESIV+S+FMHD 
Sbjct: 394 KQERHLVATVGKFSVIWNFQQVKNSSHECYQNQQGLKSCYCYKIVLKDESIVESRFMHDK 453

Query: 334 FS-SVSPNAPLVVATPKNVSSFNVSRE 257
           F+ S SP APLVVATP  VSSF++S +
Sbjct: 454 FAVSDSPEAPLVVATPLKVSSFSISNK 480


>tr|B6UDP8|B6UDP8_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1
          Length = 618

 Score =  121 bits (303), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QE++LVATVG F+V+WN ++VK+SNHECY+  +GLKSCYCY+V+ K+ESIVDS+FMH+ 
Sbjct: 531 KQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQQGLKSCYCYKVVLKDESIVDSRFMHEK 590

Query: 334 F-SSVSPNAPLVVATPKNVSSFNVS 263
           F +S SP APLVVATP  VSSF+++
Sbjct: 591 FATSDSPEAPLVVATPMKVSSFSIA 615


>tr|B6UBL0|B6UBL0_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1
          Length = 593

 Score =  121 bits (303), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QE++LVATVG F+V+WN ++VK+SNHECY+  +GLKSCYCY+V+ K+ESIVDS+FMH+ 
Sbjct: 506 KQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQQGLKSCYCYKVVLKDESIVDSRFMHEK 565

Query: 334 F-SSVSPNAPLVVATPKNVSSFNVS 263
           F +S SP APLVVATP  VSSF+++
Sbjct: 566 FATSDSPEAPLVVATPMKVSSFSIA 590


>tr|Q6K4M9|Q6K4M9_ORYSJ Os02g0789600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0054K20.36 PE=4 SV=1
          Length = 617

 Score =  120 bits (300), Expect = 5e-26
 Identities = 54/85 (63%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QE++LVATVG F+V+WN ++VK+SNHECY+   GLKSCYCY+V+ K+ESIVDS+FMH+ 
Sbjct: 528 KQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQEGLKSCYCYKVVLKDESIVDSRFMHEK 587

Query: 334 FSSV-SPNAPLVVATPKNVSSFNVS 263
           F++  SP APLVVATP  VSSF+++
Sbjct: 588 FATTDSPEAPLVVATPMKVSSFSLA 612


>tr|A3AC52|A3AC52_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008374 PE=4 SV=1
          Length = 618

 Score =  120 bits (300), Expect = 5e-26
 Identities = 54/85 (63%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QE++LVATVG F+V+WN ++VK+SNHECY+   GLKSCYCY+V+ K+ESIVDS+FMH+ 
Sbjct: 529 KQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQEGLKSCYCYKVVLKDESIVDSRFMHEK 588

Query: 334 FSSV-SPNAPLVVATPKNVSSFNVS 263
           F++  SP APLVVATP  VSSF+++
Sbjct: 589 FATTDSPEAPLVVATPMKVSSFSLA 613


>tr|A2XAF1|A2XAF1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09230 PE=4 SV=1
          Length = 617

 Score =  120 bits (300), Expect = 5e-26
 Identities = 54/85 (63%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QE++LVATVG F+V+WN ++VK+SNHECY+   GLKSCYCY+V+ K+ESIVDS+FMH+ 
Sbjct: 528 KQEKHLVATVGKFSVIWNFQQVKDSNHECYRDQEGLKSCYCYKVVLKDESIVDSRFMHEK 587

Query: 334 FSSV-SPNAPLVVATPKNVSSFNVS 263
           F++  SP APLVVATP  VSSF+++
Sbjct: 588 FATTDSPEAPLVVATPMKVSSFSLA 612


>tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subsp.
           japonica GN=P0544B02.5 PE=2 SV=1
          Length = 649

 Score =  118 bits (296), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG ++VVWN  +VK S+HECYQ   GLKSCYCY+VIPK+ESIV S+FMH+ 
Sbjct: 562 KQERHLVATVGKYSVVWNFLQVKNSHHECYQCQEGLKSCYCYKVIPKDESIVASRFMHEK 621

Query: 334 FS-SVSPNAPLVVATPKNVSSFNVS 263
           ++ S +P APLVVATP  V+SF++S
Sbjct: 622 YAVSDTPEAPLVVATPMKVTSFSIS 646


>tr|B8AIW2|B8AIW2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06085 PE=4 SV=1
          Length = 404

 Score =  118 bits (296), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = -2

Query: 514 RQERNLVATVGNFTVVWNSRRVKESNHECYQVTRGLKSCYCYRVIPKEESIVDSKFMHDS 335
           +QER+LVATVG ++VVWN  +VK S+HECYQ   GLKSCYCY+VIPK+ESIV S+FMH+ 
Sbjct: 317 KQERHLVATVGKYSVVWNFLQVKNSHHECYQCQEGLKSCYCYKVIPKDESIVASRFMHEK 376

Query: 334 FS-SVSPNAPLVVATPKNVSSFNVS 263
           ++ S +P APLVVATP  V+SF++S
Sbjct: 377 YAVSDTPEAPLVVATPMKVTSFSIS 401