NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915199
Clone id YMU001_000067_F10
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGGCAAGGATTGTCTCCCCTGAAAGTACAGAAAGGGTGCAGAAGGTGCTAGAGGAATTT
CCTTTGATTGATTGCAAAGATTTCGATAGATCGTTATTACAGAAGAGTTTGCGGGAAATC
TGTGGTCAGGATATGATCAATGAGAAAGAGCAAATCAAAGCTTTGCTACAAAGTGTTGGG
CCAGAGATGTGCTCGGACTGGTCAGATTGGACTTCTGAGGGAAATGCTACCTCTTTCCTT
CCCAAATTCTTGAAGGCGATCCCTCTTGATCACACGACCACAAAATTACAGGAGATGCTC
AAGGTCTTGCAAGACAGGAAAATGTGCGTCCGTTATCCTTCTCGTTTGATGTGCTATGAT
GCAAAAGAGCAGATGACTTATTATAGAATGACTGTCCATGTTCTTCAGGACTATGTTTTT
CATAAATATCAGATTGAAATGAGGCGGAATCC
■■Homology search results ■■ -
sp_hit_id Q2K9L0
Definition sp|Q2K9L0|RS3_RHIEC 30S ribosomal protein S3 OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
Align length 36
Score (bit) 32.0
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915199|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F10.
         (452 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2K9L0|RS3_RHIEC 30S ribosomal protein S3 OS=Rhizobium etli (...    32   1.3  
sp|B4PK98|EIF3E_DROYA Eukaryotic translation initiation factor 3...    31   2.2  
sp|B4QMY7|EIF3E_DROSI Eukaryotic translation initiation factor 3...    31   2.2  
sp|B4HK67|EIF3E_DROSE Eukaryotic translation initiation factor 3...    31   2.2  
sp|B4KY00|EIF3E_DROMO Eukaryotic translation initiation factor 3...    31   2.2  
sp|O77410|EIF3E_DROME Eukaryotic translation initiation factor 3...    31   2.2  
sp|B3NDH5|EIF3E_DROER Eukaryotic translation initiation factor 3...    31   2.2  
sp|B3M4D9|EIF3E_DROAN Eukaryotic translation initiation factor 3...    31   2.2  
sp|B4N3B0|EI3E2_DROWI Eukaryotic translation initiation factor 3...    31   2.2  
sp|Q8UE24|RS3_AGRT5 30S ribosomal protein S3 OS=Agrobacterium tu...    31   2.8  
sp|Q5BLE2|FA73B_DANRE Protein FAM73B OS=Danio rerio GN=fam73b PE...    31   2.8  
sp|B4LG58|EIF3E_DROVI Eukaryotic translation initiation factor 3...    31   2.8  
sp|Q29EX2|EIF3E_DROPS Eukaryotic translation initiation factor 3...    31   2.8  
sp|B4H5N1|EIF3E_DROPE Eukaryotic translation initiation factor 3...    31   2.8  
sp|Q1MID5|RS3_RHIL3 30S ribosomal protein S3 OS=Rhizobium legumi...    30   3.7  
sp|B4MYA1|EI3E1_DROWI Eukaryotic translation initiation factor 3...    30   3.7  
sp|Q823K4|RUVB_CHLCV Holliday junction ATP-dependent DNA helicas...    30   4.8  
sp|Q7VVR4|SYFA_BORPE Phenylalanyl-tRNA synthetase alpha chain OS...    29   8.2  
sp|Q7W7C7|SYFA_BORPA Phenylalanyl-tRNA synthetase alpha chain OS...    29   8.2  
sp|Q7WKR5|SYFA_BORBR Phenylalanyl-tRNA synthetase alpha chain OS...    29   8.2  
sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protei...    29   8.2  
sp|P33680|GUC2A_MOUSE Guanylin OS=Mus musculus GN=Guca2a PE=2 SV=1     29   8.2  

>sp|Q2K9L0|RS3_RHIEC 30S ribosomal protein S3 OS=Rhizobium etli
           (strain CFN 42 / ATCC 51251) GN=rpsC PE=3 SV=1
          Length = 244

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 222 KCYLFPSQILEGDPS*SHDHKITGDAQGLARQENVR 329
           K ++F  +ILE DP  S    + GDAQG A +E  R
Sbjct: 199 KVWIFKGEILEHDPMASERRALEGDAQGPASRERDR 234


>sp|B4PK98|EIF3E_DROYA Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila yakuba GN=eIF3-S6 PE=3 SV=1
          Length = 435

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B4QMY7|EIF3E_DROSI Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila simulans GN=eIF3-S6 PE=3 SV=1
          Length = 435

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B4HK67|EIF3E_DROSE Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila sechellia GN=eIF3-S6 PE=3 SV=2
          Length = 434

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B4KY00|EIF3E_DROMO Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila mojavensis GN=eIF3-S6 PE=3 SV=1
          Length = 434

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|O77410|EIF3E_DROME Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila melanogaster GN=eIF3-S6 PE=2
           SV=1
          Length = 435

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B3NDH5|EIF3E_DROER Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila erecta GN=eIF3-S6 PE=3 SV=1
          Length = 435

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B3M4D9|EIF3E_DROAN Eukaryotic translation initiation factor 3
           subunit E OS=Drosophila ananassae GN=eIF3-S6 PE=3 SV=1
          Length = 434

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|B4N3B0|EI3E2_DROWI Eukaryotic translation initiation factor 3
           subunit E-2 OS=Drosophila willistoni GN=eIF3-S6-2 PE=3
           SV=1
          Length = 434

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 67  IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVGPEMCSDWS-DWTSEGNATSFLP 243
           I+C+  DR L    L  +CG+++ N++E ++ +L++V      D++ D     N +  +P
Sbjct: 9   INCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMP 68

Query: 244 KFL 252
           + L
Sbjct: 69  EEL 71


>sp|Q8UE24|RS3_AGRT5 30S ribosomal protein S3 OS=Agrobacterium
           tumefaciens (strain C58 / ATCC 33970) GN=rpsC PE=3 SV=1
          Length = 243

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 222 KCYLFPSQILEGDPS*SHDHKITGDAQGLARQE 320
           K ++F  +ILE DP  S    + GDAQG A +E
Sbjct: 199 KVWIFKGEILEHDPMASERRGLEGDAQGPASRE 231
tr_hit_id Q69S66
Definition tr|Q69S66|Q69S66_ORYSJ Os07g0191700 protein OS=Oryza sativa subsp. japonica
Align length 166
Score (bit) 122.0
E-value 7.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915199|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F10.
         (452 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q69S66|Q69S66_ORYSJ Os07g0191700 protein OS=Oryza sativa subs...   122   7e-27
tr|B8B852|B8B852_ORYSI Putative uncharacterized protein OS=Oryza...   122   7e-27
tr|A3BHF1|A3BHF1_ORYSJ Putative uncharacterized protein OS=Oryza...   119   1e-25
tr|A7NZE6|A7NZE6_VITVI Chromosome chr6 scaffold_3, whole genome ...   108   1e-22
tr|Q0WZC1|Q0WZC1_WHEAT RNA ligase isoform 2 (Fragment) OS=Tritic...   100   4e-20
tr|Q0WZC0|Q0WZC0_WHEAT RNA ligase isoform 3 (Fragment) OS=Tritic...   100   4e-20
tr|Q0WZC2|Q0WZC2_WHEAT RNA ligase isoform 1 OS=Triticum aestivum...    99   8e-20
tr|A9S7Q6|A9S7Q6_PHYPA Predicted protein (Fragment) OS=Physcomit...    99   1e-19
tr|Q9LN14|Q9LN14_ARATH T6D22.1 OS=Arabidopsis thaliana PE=4 SV=1       96   9e-19
tr|Q96312|Q96312_ARATH AT.I.24-9 protein (Fragment) OS=Arabidops...    96   9e-19
tr|Q0WL81|Q0WL81_ARATH Translation elongation factor EF-1 alpha ...    96   9e-19
tr|A5BVB3|A5BVB3_VITVI Putative uncharacterized protein OS=Vitis...    91   3e-17
tr|Q6L3H9|Q6L3H9_SOLDE Putative translation elongation factor, i...    66   8e-10
tr|Q21FG9|Q21FG9_SACD2 Putative uncharacterized protein OS=Sacch...    36   1.1  
tr|Q7PKK5|Q7PKK5_ANOGA AGAP001272-PA (Fragment) OS=Anopheles gam...    35   1.4  
tr|Q16PG3|Q16PG3_AEDAE Putative uncharacterized protein (Fragmen...    35   1.4  
tr|B0W2F4|B0W2F4_CULQU Putative uncharacterized protein OS=Culex...    35   1.4  
tr|A4I9S8|A4I9S8_LEIIN Putative uncharacterized protein OS=Leish...    35   2.5  
tr|A2DYC3|A2DYC3_TRIVA Putative uncharacterized protein OS=Trich...    35   2.5  
tr|A2ERV9|A2ERV9_TRIVA Putative uncharacterized protein OS=Trich...    34   3.2  
tr|Q1E601|Q1E601_COCIM Putative uncharacterized protein OS=Cocci...    34   3.2  
tr|Q160C5|Q160C5_ROSDO Putative uncharacterized protein OS=Roseo...    33   5.5  
tr|B8LVT1|B8LVT1_9EURO G-patch domain protein (TFIP11), putative...    33   5.5  
tr|Q130I0|Q130I0_RHOPS Putative urea/short-chain amide transport...    33   7.1  
tr|A7TGM3|A7TGM3_VANPO Putative uncharacterized protein OS=Vande...    33   9.3  

>tr|Q69S66|Q69S66_ORYSJ Os07g0191700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0049I08.10 PE=2 SV=1
          Length = 1162

 Score =  122 bits (307), Expect = 7e-27
 Identities = 74/166 (44%), Positives = 97/166 (58%), Gaps = 16/166 (9%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
           VARIVS ES+ ++++VL  +PL    D   S L  SLREIC  +  +EK+QIKALL++VG
Sbjct: 380 VARIVSRESSVQIEEVLRNYPLPPL-DGVGSDLGPSLREICAANRSDEKQQIKALLENVG 438

Query: 181 PEMCSDWSDW---------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCVR 333
           P MC D SDW          S     S + KFL+A P D+TT KLQEM++V++ R     
Sbjct: 439 PSMCPDHSDWFGCSGLDDHQSPSANRSVVTKFLQAHPTDYTTKKLQEMIRVMKQR----N 494

Query: 334 YPSRLMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMRRN 450
           +P+   CY              YY+M +HVL D VF +YQ EMRRN
Sbjct: 495 FPAAFKCYWNYHKIDSLSNDSLYYKMVIHVLSDSVFRRYQQEMRRN 540


>tr|B8B852|B8B852_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25224 PE=4 SV=1
          Length = 1117

 Score =  122 bits (307), Expect = 7e-27
 Identities = 74/166 (44%), Positives = 97/166 (58%), Gaps = 16/166 (9%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
           VARIVS ES+ ++++VL  +PL    D   S L  SLREIC  +  +EK+QIKALL++VG
Sbjct: 335 VARIVSRESSVQIEEVLRNYPLPPL-DGVGSDLGPSLREICAANRSDEKQQIKALLENVG 393

Query: 181 PEMCSDWSDW---------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCVR 333
           P MC D SDW          S     S + KFL+A P D+TT KLQEM++V++ R     
Sbjct: 394 PSMCPDHSDWFGCSGLDDHQSPSANRSVVTKFLQAHPTDYTTKKLQEMIRVMKQR----N 449

Query: 334 YPSRLMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMRRN 450
           +P+   CY              YY+M +HVL D VF +YQ EMRRN
Sbjct: 450 FPAAFKCYWNYHKIDSLSNDSLYYKMVIHVLSDSVFRRYQQEMRRN 495


>tr|A3BHF1|A3BHF1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022473 PE=4 SV=1
          Length = 1213

 Score =  119 bits (297), Expect = 1e-25
 Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 22/172 (12%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKD---FDRSL---LQKSLREICGQDMINEKEQIKA 162
           VARIVS ES+ ++++VL  +PL        F  ++   L  SLREIC  +  +EK+QIKA
Sbjct: 405 VARIVSRESSVQIEEVLRNYPLPPLDGEVLFSYAVGSDLGPSLREICAANRSDEKQQIKA 464

Query: 163 LLQSVGPEMCSDWSDW---------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQD 315
           LL++VGP MC D SDW          S     S + KFL+A P D+TT KLQEM++V++ 
Sbjct: 465 LLENVGPSMCPDHSDWFGCSGLDDHQSPSANRSVVTKFLQAHPTDYTTKKLQEMIRVMKQ 524

Query: 316 RKMCVRYPSRLMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMRRN 450
           R     +P+   CY              YY+M +HVL D VF +YQ EMRRN
Sbjct: 525 R----NFPAAFKCYWNYHKIDSLSNDSLYYKMVIHVLSDSVFRRYQQEMRRN 572


>tr|A7NZE6|A7NZE6_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024483001
           PE=4 SV=1
          Length = 1023

 Score =  108 bits (271), Expect = 1e-22
 Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 15/163 (9%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
           VARIVS ES++ ++KVL +FP     +   S L  SLREIC  +  +EK+QIKALL+S+G
Sbjct: 249 VARIVSHESSKHLEKVLRDFPPPP-SEAAGSDLGPSLREICAANRSDEKQQIKALLESIG 307

Query: 181 PEMCSDWSDW--------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCVRY 336
              C D+ DW         S     S L KFL+A P D +TTKLQEM+++++++    R+
Sbjct: 308 SSFCPDYLDWFGNESVGFHSRNADRSVLSKFLQARPADFSTTKLQEMIRLMREK----RF 363

Query: 337 PSRLMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMR 444
           P+   CY              Y++M +HV  D  F +YQ EMR
Sbjct: 364 PAAFKCYYNFHKVDSISADNLYFKMVIHVHSDSAFRRYQKEMR 406


>tr|Q0WZC1|Q0WZC1_WHEAT RNA ligase isoform 2 (Fragment) OS=Triticum
           aestivum PE=2 SV=1
          Length = 1034

 Score =  100 bits (249), Expect = 4e-20
 Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 14/164 (8%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPL--IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQS 174
           VARIVS ES+ ++++VL  FP+  +D  D D   L  SLR+IC  +  +EK+QIKALL++
Sbjct: 252 VARIVSRESSVQMEEVLRNFPIPSLDGGDSD---LGPSLRDICAANRSDEKQQIKALLEN 308

Query: 175 VGPEMCSDWSDW--------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCV 330
           VG  MC D  DW         S     S +  FL+A P D+ T KLQEM+ +++ +    
Sbjct: 309 VGSSMCPDHRDWFGYSGLEPQSRNADKSVVTHFLQAHPTDYATKKLQEMIGLMKRKNFSA 368

Query: 331 RYPSRLMCYDAKEQMT----YYRMTVHVLQDYVFHKYQIEMRRN 450
            + S    Y   + ++     Y+M +HV  D VF +YQ EMR+N
Sbjct: 369 SFKS-YWNYQKVDSLSNDNLCYKMVIHVYSDSVFRRYQQEMRKN 411


>tr|Q0WZC0|Q0WZC0_WHEAT RNA ligase isoform 3 (Fragment) OS=Triticum
           aestivum PE=2 SV=1
          Length = 1044

 Score =  100 bits (249), Expect = 4e-20
 Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 14/164 (8%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPL--IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQS 174
           VARIVS ES+ ++++VL  FP+  +D  D D   L  SLR+IC  +  +EK+QIKALL++
Sbjct: 262 VARIVSRESSVQMEEVLRNFPIPSLDGGDSD---LGPSLRDICAANRSDEKQQIKALLEN 318

Query: 175 VGPEMCSDWSDW--------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCV 330
           VG  MC D  DW         S     S +  FL+A P D+ T KLQEM+ +++ +    
Sbjct: 319 VGSSMCPDHRDWFGYSGLEPQSRNADKSVVTHFLQAHPTDYATKKLQEMIGLMKRKNFSA 378

Query: 331 RYPSRLMCYDAKEQMT----YYRMTVHVLQDYVFHKYQIEMRRN 450
            + S    Y   + ++     Y+M +HV  D VF +YQ EMR+N
Sbjct: 379 SFKS-YWNYQKVDSLSNDNLCYKMVIHVYSDSVFRRYQQEMRKN 421


>tr|Q0WZC2|Q0WZC2_WHEAT RNA ligase isoform 1 OS=Triticum aestivum
           PE=2 SV=1
          Length = 1116

 Score = 99.4 bits (246), Expect = 8e-20
 Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 14/164 (8%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPL--IDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQS 174
           VARIVS ES+ ++++VL  FP+  +D  D D   L  SLR+IC  +  +EK+QIK+LL++
Sbjct: 334 VARIVSRESSVQMEEVLRNFPIPSLDGGDSD---LGPSLRDICAANRSDEKQQIKSLLEN 390

Query: 175 VGPEMCSDWSDW--------TSEGNATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCV 330
           VG  MC D  DW         S     S +  FL+A P D+ T KLQEM+ +++ +    
Sbjct: 391 VGSSMCPDHRDWFGYSGLEAQSRNADKSVVTHFLQAHPTDYATKKLQEMIGLMKRKNFSA 450

Query: 331 RYPSRLMCYDAKEQMT----YYRMTVHVLQDYVFHKYQIEMRRN 450
            + S    Y   + ++     Y+M +HV  D VF +YQ EMR+N
Sbjct: 451 SFKS-YWNYQKVDSLSNDNLCYKMVIHVYSDSVFRRYQQEMRKN 493


>tr|A9S7Q6|A9S7Q6_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_125536 PE=4 SV=1
          Length = 999

 Score = 99.0 bits (245), Expect = 1e-19
 Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 15/165 (9%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
           VAR+V+PES   + +VL +FP     +       K LREIC  +     +Q++ALL++VG
Sbjct: 222 VARVVTPESATSLSEVLIKFPPPPSPE------GKGLREICASNRDAVSKQVEALLKAVG 275

Query: 181 PEMCSDWSDWTSEGNA----------TSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCV 330
            + CSDW+DW  +  +          +  L  FL + P D++T KLQEM++V++  K+ V
Sbjct: 276 SDFCSDWTDWLDDKVSGHEDKKNTPLSPMLETFLHSNPADYSTKKLQEMIQVIRKSKLPV 335

Query: 331 RY-----PSRLMCYDAKEQMTYYRMTVHVLQDYVFHKYQIEMRRN 450
           R+      S     D  + +++++M VHVL D  F +YQ EMR++
Sbjct: 336 RFKCHTIKSSQSTDDQDQVISHFKMIVHVLSDSAFRRYQREMRKH 380


>tr|Q9LN14|Q9LN14_ARATH T6D22.1 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1417

 Score = 95.9 bits (237), Expect = 9e-19
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1    VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
            VARIVS +S+  ++ VL + P   C   +  L   SLREIC     NEK+Q++ALL+SVG
Sbjct: 632  VARIVSSQSSRDMENVLRDHPPPPCDGANLDL-GLSLREICAAHRSNEKQQMRALLRSVG 690

Query: 181  PEMCSDWSDWTSEGN-----ATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCVRYPSR 345
            P  C    +W  + +       S + KFL++ P D++T+KLQEM+++++++    R P+ 
Sbjct: 691  PSFCPSDVEWFGDESHPKSADKSVITKFLQSQPADYSTSKLQEMVRLMKEK----RLPAA 746

Query: 346  LMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMR 444
              CY       D      +Y++ VHV  D  F +Y  EMR
Sbjct: 747  FKCYHNFHRAEDISPDNLFYKLVVHVHSDSGFRRYHKEMR 786


>tr|Q96312|Q96312_ARATH AT.I.24-9 protein (Fragment) OS=Arabidopsis
           thaliana GN=AT.I.24-9 PE=4 SV=1
          Length = 822

 Score = 95.9 bits (237), Expect = 9e-19
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1   VARIVSPESTERVQKVLEEFPLIDCKDFDRSLLQKSLREICGQDMINEKEQIKALLQSVG 180
           VARIVS +S+  ++ VL + P   C   +  L   SLREIC     NEK+Q++ALL+SVG
Sbjct: 48  VARIVSSQSSRDMENVLRDHPPPPCDGANLDL-GLSLREICAAHRSNEKQQMRALLRSVG 106

Query: 181 PEMCSDWSDWTSEGN-----ATSFLPKFLKAIPLDHTTTKLQEMLKVLQDRKMCVRYPSR 345
           P  C    +W  + +       S + KFL++ P D++T+KLQEM+++++++    R P+ 
Sbjct: 107 PSFCPSDVEWFGDESHPKSADKSVITKFLQSQPADYSTSKLQEMVRLMKEK----RLPAA 162

Query: 346 LMCY-------DAKEQMTYYRMTVHVLQDYVFHKYQIEMR 444
             CY       D      +Y++ VHV  D  F +Y  EMR
Sbjct: 163 FKCYHNFHRAEDISPDNLFYKLVVHVHSDSGFRRYHKEMR 202