BP915200
Clone id YMU001_000067_F11
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTCACAGCTATATCATCTGTCTCACTGTAGGTGGCTTATTTATTTTA
CAGATTCGAAGGAGGACTTAAGCTTGGAATCAAAGTGTCCCTTTAGCTACCTCCCACTAT
TCCATACAATATTCTTATGGCTCCATGATTCTCCACTTGAATTGCCTAACAGTCAACATA
TTGTACCCATCTTCGGACATACGATGGTCTCAGCTGCTCAAGCCCATTTCTTGCAGCAGC
TATCATAAACATTAAGTTATACAGGTTGTTTGAGCACTTTAAAGAGTTCATTGCTCGGCG
ACCTTGTTTTGTAAAGCGCTCTCTTGTTGATTGGGCAAAGTCGCCCTACAAACGTACAAC
TAAATTACTAAGATTCTCGTGCTGTCAAGGCATCACAGATGAACTATGTACTCTGCATCT
CCTCCAAATATCAAGAAACGCTTCCAAAAAAATTGCCAGAGCTTCAGAATGTGAGAAATC
AAAATGATGTAAGCTCTGCCTTTGAGCCATCATTCATTCACTAGTTCCAACTTCTGCATA
T
■■Homology search results ■■ -
sp_hit_id Q8I8A2
Definition sp|Q8I8A2|TCTP_SCHHA Translationally-controlled tumor protein homolog (Fragment) OS=Schistosoma haematobium
Align length 47
Score (bit) 30.0
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915200|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F11.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8I8A2|TCTP_SCHHA Translationally-controlled tumor protein ho... 30 7.0
sp|A3DMM2|PYRH_STAMF Uridylate kinase OS=Staphylothermus marinus... 30 7.0
sp|P14263|CP51_CANTR Cytochrome P450 51 OS=Candida tropicalis GN... 30 7.0
sp|Q9VS79|CP4D8_DROME Cytochrome P450 4d8 OS=Drosophila melanoga... 30 7.0
sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small... 30 7.1
sp|Q24595|XPC_DROME DNA repair protein complementing XP-C cells ... 30 9.1
sp|Q98949|TYRO3_CHICK Tyrosine-protein kinase receptor TYRO3 OS=... 30 9.1

>sp|Q8I8A2|TCTP_SCHHA Translationally-controlled tumor protein
homolog (Fragment) OS=Schistosoma haematobium GN=TCTP
PE=2 SV=2
Length = 152

Score = 30.0 bits (66), Expect = 7.0
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3

Query: 357 DSRAVKASQMNYVLCISSKYQETLPKKLPELQNVRN--QNDVSSAFE 491
D ++ KA +Y+ I + Q+T+P KLP L++ N + DV + F+
Sbjct: 81 DLKSYKAQLKSYLKAIKERLQKTVPDKLPLLESQVNKYRKDVFANFD 127


>sp|A3DMM2|PYRH_STAMF Uridylate kinase OS=Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1) GN=pyrH PE=3 SV=1
Length = 224

Score = 30.0 bits (66), Expect = 7.0
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3

Query: 315 IGQSRPTNVQLNY*-DSRAVKASQMNYVLCISSKYQETLPK---KLPELQNVRNQNDVS 479
IG +R V NY D ++++Q+N L ISS Y + P+ L EL + N +++
Sbjct: 51 IGYAREIGVSSNYWLDMIGIRSAQLNAYLLISSLYPKAYPEPVNNLEELLRIMNNYEIA 109


>sp|P14263|CP51_CANTR Cytochrome P450 51 OS=Candida tropicalis
GN=ERG11 PE=3 SV=2
Length = 528

Score = 30.0 bits (66), Expect = 7.0
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3

Query: 93 YLPLFHTIFLWLHDSPLELPNSQHIVPIFGHTMVSAAQAH 212
++PL H+IF + + PL +PN+++++P + +VSA AH
Sbjct: 373 HMPL-HSIFRKVMN-PLRVPNTKYVIPKGHYVLVSAGYAH 410


>sp|Q9VS79|CP4D8_DROME Cytochrome P450 4d8 OS=Drosophila
melanogaster GN=Cyp4d8 PE=2 SV=2
Length = 463

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3

Query: 485 GRAYIILISHILKLWQFFWKRFLIFGGDAE 396
GR Y++ H+ ++W F R LI GDAE
Sbjct: 16 GREYVLKFGHLQRVWIF--NRLLIMSGDAE 43


>sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small
chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2
Length = 341

Score = 30.0 bits (66), Expect = 7.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2

Query: 287 PCFVKRS--LVDWAKSPYKRTTKLLRFSCCQGI 379
PC K++ +DW +SP +L+ F+C +GI
Sbjct: 150 PCISKKAKWCLDWIQSPMSFAVRLVAFACVEGI 182


>sp|Q24595|XPC_DROME DNA repair protein complementing XP-C cells
homolog OS=Drosophila melanogaster GN=mus210 PE=1 SV=2
Length = 1293

Score = 29.6 bits (65), Expect = 9.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3

Query: 426 LPKKLPELQNVRNQNDVSSAFEPS 497
LPKK P+L+ ++N D FEP+
Sbjct: 895 LPKKRPKLEKLKNSQDSDEVFEPA 918


>sp|Q98949|TYRO3_CHICK Tyrosine-protein kinase receptor TYRO3
OS=Gallus gallus GN=TYRO3 PE=1 SV=1
Length = 873

Score = 29.6 bits (65), Expect = 9.1
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Frame = +3

Query: 30 WLI-----YFTDSKEDLSLESKCPFSYL------PLFHTIFLWLHDSPLELPN-SQHIVP 173
WLI YFT ED+S+ PF P TI W+ DS + LP+ S I+
Sbjct: 120 WLIVEGVPYFTVEPEDVSVSPNAPFHMACAAVGPPEPVTIVWWMGDSRVGLPDISPSILN 179

Query: 174 IFG--HTMVSAAQAHFLQQLS 230
+ G + + + +AH ++ LS
Sbjct: 180 VSGINQSTMFSCEAHNVKGLS 200


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915200|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_F11.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******