BP915210
Clone id YMU001_000067_G12
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTTGAGAAGGGATACATGGGCTTCATCTATGGTGTGCTAATGCAGTCCCCCATTGTTCT
TCCCTCATATTCGAGTGCCATCACACACAAAAGAGTTTTGAGTTATCTTGGTTGTTTTCA
AGACTGAAGCTTTCATGGGTTGAGTTTTGTTCTTTTCTAATGTCTTTTTCTTGGAAGATT
CCACGATTTGCTTGATTGTGTAGCGAACTCTCACAATCAGAGACCCAACACTTTCCTAGC
CCCACTACGTACTTCTTGACGTCGTCTTGCTGGATTTTCTCTAGTTCTTGCATCAGCCAG
TTGGAGAGTTTGATAAGAATTTTATTTGTGGTCAGGGCGAGACACAATCTGCTCGGCCCA
AAGTTTCGTACCAGGTCATTACTTAACCTTGCTCTCCAGGAGGGTTTGGGATCATTGGCC
TAGCACGGCAGAGGAGAGTCATTCTAGGGAAGCTCATTGTGAGAGGTCTCCTTCCAACGG
AGGACCCCTAGAAGGAGCTATTGCTCCATCAAATTCGTGCTTGGGTCCCACATACGCA
■■Homology search results ■■ -
sp_hit_id A5D7B2
Definition sp|A5D7B2|CLM9_BOVIN CMRF35-like molecule 9 OS=Bos taurus
Align length 71
Score (bit) 30.8
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915210|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_G12.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5D7B2|CLM9_BOVIN CMRF35-like molecule 9 OS=Bos taurus GN=CD3... 31 3.7
sp|Q7ZYM8|CI030_XENLA UPF0439 protein C9orf30 homolog OS=Xenopus... 31 3.7
sp|Q28J92|CI030_XENTR UPF0439 protein C9orf30 homolog OS=Xenopus... 30 4.9
sp|Q8P322|TILS_STRP8 tRNA(Ile)-lysidine synthase OS=Streptococcu... 30 6.4
sp|Q5XEL7|TILS_STRP6 tRNA(Ile)-lysidine synthase OS=Streptococcu... 30 6.4
sp|Q879R7|TILS_STRP3 tRNA(Ile)-lysidine synthase OS=Streptococcu... 30 6.4
sp|Q9A201|TILS_STRP1 tRNA(Ile)-lysidine synthase OS=Streptococcu... 30 6.4
sp|P33520|RES1_SCHPO Cell division cycle-related protein res1/sc... 30 8.3
sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sa... 30 8.3

>sp|A5D7B2|CLM9_BOVIN CMRF35-like molecule 9 OS=Bos taurus
GN=CD300LG PE=2 SV=2
Length = 255

Score = 30.8 bits (68), Expect = 3.7
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -3

Query: 410 PKPSWRARLSNDLVRNFGPSRLCLALTTNKILIKLSNWLMQELEKIQ--QDDVKKYVVGL 237
P S ++R+S L+R P + LAL L L N++ Q EK Q + KK V L
Sbjct: 156 PSSSSKSRVSIPLIRILAPVLVLLALLLATGLAALGNYMFQRREKAQLASETQKKDKVHL 215

Query: 236 GKCWVSDCESS 204
D E+S
Sbjct: 216 SHLTSEDDEAS 226


>sp|Q7ZYM8|CI030_XENLA UPF0439 protein C9orf30 homolog OS=Xenopus
laevis PE=2 SV=1
Length = 365

Score = 30.8 bits (68), Expect = 3.7
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3

Query: 296 LMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKDIRKEQNSTHESFSLE 117
L+ E KIQ + ++K V +C SSL ++ + E+D+ ++QNS S E
Sbjct: 196 LIDEQGKIQAEPIRKVPVTDSQCIQGSPSSSLKTESF--VVPERDVYEDQNSIANMHSSE 253

Query: 116 NNQDNSKLF 90
++ ++ +F
Sbjct: 254 SSVHSTPIF 262


>sp|Q28J92|CI030_XENTR UPF0439 protein C9orf30 homolog OS=Xenopus
tropicalis GN=TNeu005j19.1 PE=2 SV=1
Length = 365

Score = 30.4 bits (67), Expect = 4.9
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3

Query: 296 LMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKDIRKEQNSTHESFSLE 117
L+ E KIQ + ++K V +C SS+ ++ + E+D+ ++QNS S E
Sbjct: 196 LIDEQGKIQAEPIRKVPVTDSQCAQGSPSSSIKTESF--VVPERDVYEDQNSIVNMHSSE 253

Query: 116 NNQDNSKLF 90
++ ++ LF
Sbjct: 254 SSLHSTPLF 262


>sp|Q8P322|TILS_STRP8 tRNA(Ile)-lysidine synthase OS=Streptococcus
pyogenes serotype M18 GN=tilS PE=3 SV=1
Length = 428

Score = 30.0 bits (66), Expect = 6.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -3

Query: 341 LALTTNKILIKLSNWLMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKD 162
L L +K+ I++ + ++ + D + Y+ KCW + ++ GIF EK
Sbjct: 40 LYLFQDKLKIRIGIAHVNHKQRSESDSEEAYL----KCWAKKHDIPIYVSNFEGIFSEKA 95

Query: 161 IRKEQNSTHESFSLENN 111
R + + +S L+NN
Sbjct: 96 ARDWRYAFFKSIMLKNN 112


>sp|Q5XEL7|TILS_STRP6 tRNA(Ile)-lysidine synthase OS=Streptococcus
pyogenes serotype M6 GN=tilS PE=3 SV=1
Length = 428

Score = 30.0 bits (66), Expect = 6.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -3

Query: 341 LALTTNKILIKLSNWLMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKD 162
L L +K+ I++ + ++ + D + Y+ KCW + ++ GIF EK
Sbjct: 40 LYLFQDKLKIRIGIAHVNHKQRSESDSEEAYL----KCWAKKHDIPIYVSNFEGIFSEKA 95

Query: 161 IRKEQNSTHESFSLENN 111
R + + +S L+NN
Sbjct: 96 ARDWRYAFFKSIMLKNN 112


>sp|Q879R7|TILS_STRP3 tRNA(Ile)-lysidine synthase OS=Streptococcus
pyogenes serotype M3 GN=tilS PE=3 SV=1
Length = 428

Score = 30.0 bits (66), Expect = 6.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -3

Query: 341 LALTTNKILIKLSNWLMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKD 162
L L +K+ I++ + ++ + D + Y+ KCW + ++ GIF EK
Sbjct: 40 LYLFQDKLKIRIGIAHVNHKQRSESDSEEAYL----KCWAKKHDIPIYVSNFEGIFSEKA 95

Query: 161 IRKEQNSTHESFSLENN 111
R + + +S L+NN
Sbjct: 96 ARDWRYAFFKSIMLKNN 112


>sp|Q9A201|TILS_STRP1 tRNA(Ile)-lysidine synthase OS=Streptococcus
pyogenes serotype M1 GN=tilS PE=3 SV=1
Length = 428

Score = 30.0 bits (66), Expect = 6.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -3

Query: 341 LALTTNKILIKLSNWLMQELEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKD 162
L L +K+ I++ + ++ + D + Y+ KCW + ++ GIF EK
Sbjct: 40 LYLFQDKLKIRIGIAHVNHKQRSESDSEEAYL----KCWAKKHDIPIYVSNFEGIFSEKA 95

Query: 161 IRKEQNSTHESFSLENN 111
R + + +S L+NN
Sbjct: 96 ARDWRYAFFKSIMLKNN 112


>sp|P33520|RES1_SCHPO Cell division cycle-related protein res1/sct1
OS=Schizosaccharomyces pombe GN=res1 PE=1 SV=1
Length = 637

Score = 29.6 bits (65), Expect = 8.3
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3

Query: 284 LEKIQQDDVKKYVVGLGKCWVSDCESSLHNQANRGIFQEKDIRKEQNSTHE--SFSLENN 111
LE +Q +KKYV + W +D + + N K R +S HE F+ EN
Sbjct: 535 LETVQLHQLKKYVTYFSQIWSTDELADISETKNLVGHDTKTNRSSLSSKHEVDLFTAENE 594

Query: 110 QDNSKL 93
KL
Sbjct: 595 AAREKL 600


>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens
GN=DNAH10 PE=2 SV=3
Length = 4471

Score = 29.6 bits (65), Expect = 8.3
Identities = 22/99 (22%), Positives = 46/99 (46%)
Frame = -3

Query: 428 PC*ANDPKPSWRARLSNDLVRNFGPSRLCLALTTNKILIKLSNWLMQELEKIQQDDVKKY 249
PC A D K + ++++ +++R+ L ++ I+L ++ L Q++ K +
Sbjct: 1017 PCVAYDEKLQFYSKIAYEVMRH--------PLIKDEHCIRLQ---LRHLANTVQENAKSW 1065

Query: 248 VVGLGKCWVSDCESSLHNQANRGIFQEKDIRKEQNSTHE 132
V+ LGK + L+N K++RK N+ +
Sbjct: 1066 VISLGKLLNESAKEELYNLHEEMEHLAKNLRKIPNTLED 1104


tr_hit_id A9TJ48
Definition tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 40.4
E-value 0.048
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915210|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_G12.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.048
tr|Q7RX44|Q7RX44_NEUCR Predicted protein OS=Neurospora crassa GN... 35 2.6
tr|A5E4C8|A5E4C8_LODEL Putative uncharacterized protein OS=Lodde... 33 5.8
tr|B2VXZ2|B2VXZ2_PYRTR Putative uncharacterized protein OS=Pyren... 33 9.9
tr|A3LTK3|A3LTK3_PICST Predicted protein OS=Pichia stipitis GN=P... 33 9.9

>tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_93427 PE=4 SV=1
Length = 170

Score = 40.4 bits (93), Expect = 0.048
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +3

Query: 315 KNFICGQGETQSARPKVSYQVIT*PCSPGGFGIIGLARQRRVILGKLIVRGLLPTEDP*K 494
+N++ G + R KV + I + GG IIG A + R +L KLI RGL P +P K
Sbjct: 3 RNYLWGGITSGKVRAKVKWDTIIQLMTQGGLKIIGPATKARALLAKLIARGLTPGLEPWK 62


>tr|Q7RX44|Q7RX44_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU05044 PE=4 SV=1
Length = 572

Score = 34.7 bits (78), Expect = 2.6
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -3

Query: 395 RARLSNDLVRNFGPSRLCLALTTNKILIKLSNWLMQELEKIQQDDV-KKYVVGLGKCWVS 219
R R D+ R P +K+L K ++W ++E+EK+ + + K VG+G+ W
Sbjct: 179 RRRFLGDVAREVYPVAAGKDFKNDKMLKKGNDWELEEVEKVVRASIFKVRTVGMGREWKK 238

Query: 218 DCESSLHNQANRGIFQEKDIRKEQNSTHESFS 123
+ + + R + K +R T+++ S
Sbjct: 239 EFMRDMKREVRREMEGCKSLRGTNLDTYQAQS 270


>tr|A5E4C8|A5E4C8_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_04467 PE=4 SV=1
Length = 1266

Score = 33.5 bits (75), Expect = 5.8
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Frame = -3

Query: 419 ANDPKPSWRARLS-------NDLVRNFGPSRLCLAL-----TTNKILIK-LSNWLMQELE 279
+N+ P W +L+ N +VR+FG S + +L T + I I + NW+++
Sbjct: 38 SNEESPYWGFQLALPENNGANYIVRHFGLSLMQTSLKYKYHTFDSIKITAIRNWIIELSN 97

Query: 278 KIQQDD---VKK-----YVVGLGKCWVSDCESSLHNQANRGIFQEKDIRKEQNSTHESFS 123
K+++ D +K+ +V + + W S S H Q R + K +E N+ + + +
Sbjct: 98 KVEEKDPHYIKEKIALLWVSLVKRIWGSYLVKSEHQQNARQELENK--AQENNNNNNNIN 155

Query: 122 LENNQDNS 99
NN +N+
Sbjct: 156 TTNNNNNN 163


>tr|B2VXZ2|B2VXZ2_PYRTR Putative uncharacterized protein
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_03380 PE=4 SV=1
Length = 613

Score = 32.7 bits (73), Expect = 9.9
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -3

Query: 434 PLPC*ANDPKPSWRARLSNDLVRNFGPSRLCLALTTNKILIKLSNWLMQELEKIQQDDVK 255
PL A P SW ++LS +V NF S + N +KL+ L +IQ DDV+
Sbjct: 340 PLLSPAYAPGGSWASQLSTPMVGNFNQSNNQADMVANATAMKLAA-LSTVNNRIQLDDVR 398

Query: 254 KY 249
K+
Sbjct: 399 KF 400


>tr|A3LTK3|A3LTK3_PICST Predicted protein OS=Pichia stipitis
GN=PICST_83392 PE=4 SV=2
Length = 1245

Score = 32.7 bits (73), Expect = 9.9
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Frame = -3

Query: 419 ANDPKPSWRARLS-------NDLVRNFGPSRLCLALTTNKIL------IKLSNWLMQELE 279
+ND P W +L+ N +VR+FG S L ++ + L + + NW++
Sbjct: 40 SNDESPYWGYQLALPENNGKNYIVRHFGLSLLQNSIKSKYHLFDTTKTLAIRNWVVDLSN 99

Query: 278 KIQQDDVKKYVVGLGKCWVS 219
KIQQDD + WVS
Sbjct: 100 KIQQDDPHYLKEKIAFLWVS 119