BP915217
Clone id YMU001_000067_H07
Library
Length 596
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGATCGACTGGTAGGATGCCATTACTGCCAGAGACAGAACATCAAGGAAATAGGTTTCTA
TTATGCTTACAGGATGGCCTTGAGGACTGTGTTTGATTTCTTGCTATCTTCAGATTATAA
GGGGGTGGTCTTCTTCAGGACATTTACACCCGATCATTTTGAGAATGGTCGGTGGGACAA
TGGAGGGAACTGCAAGAGGAAAGGCCCATTCAAAAGCAATGAGATCTCATTGCAAGGAAT
GACGGCAGAGATGTATAGAATACAGCTAGAAGAGTTTGGCAAGACTCTCCTTAACAGATC
TGATTTCACTTTTCAGCTTCACTTAGCAGATACAATACATGCTTCCCTGCTAAGGCCAGA
TGCCCATCCTGGTCCTTATCGAGAATATCAGCCTTTTGCAAAAGGTAAGAAAGCCCAGAA
TGATTGCCTACACTGGTGTCTACCAGGGGCTGTTGATACTTGGAGTGCCACGCTCTTGGA
GATGCTTAGGCATGTGTAGATATGGAATTGGCCTTTGAAGGAAATGATTTTTCTGTCAAA
AAAACAACCAAAAATTCCTGCGGCCGCGAATTCTTCCGAGTACCTGCAGGTAATAT
■■Homology search results ■■ -
sp_hit_id P38484
Definition sp|P38484|INGR2_HUMAN Interferon-gamma receptor beta chain OS=Homo sapiens
Align length 54
Score (bit) 33.5
E-value 0.69
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915217|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_H07.
(549 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P38484|INGR2_HUMAN Interferon-gamma receptor beta chain OS=Ho... 33 0.69
sp|P28328|PEX2_HUMAN Peroxisome assembly factor 1 OS=Homo sapien... 31 4.5
sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 OS=Cricetulus ... 30 5.9

>sp|P38484|INGR2_HUMAN Interferon-gamma receptor beta chain OS=Homo
sapiens GN=IFNGR2 PE=1 SV=2
Length = 337

Score = 33.5 bits (75), Expect = 0.69
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2

Query: 173 WDNGGNCKRKGPFKSNEISLQGM-TAEMYRIQLEEFGKTLLNRSDFTFQLHLAD 331
W+ GG + KGPF+SN ISL + + +Y +Q++ + L N+S+ HL++
Sbjct: 180 WEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQ--AQLLWNKSNIFRVGHLSN 231


>sp|P28328|PEX2_HUMAN Peroxisome assembly factor 1 OS=Homo sapiens
GN=PXMP3 PE=1 SV=1
Length = 305

Score = 30.8 bits (68), Expect = 4.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2

Query: 2 DRLVGCH--YCQRQNIKEIGFYYAYRMAL 82
+RL+G H +C+ QNI+E+GF Y R L
Sbjct: 168 ERLLGIHSVFCKPQNIREVGFEYMNRELL 196


>sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 OS=Cricetulus
griseus GN=PXMP3 PE=1 SV=1
Length = 304

Score = 30.4 bits (67), Expect = 5.9
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2

Query: 2 DRLVGCH--YCQRQNIKEIGFYYAYRMAL 82
+RL+G H +C+ QNI+E+GF Y R L
Sbjct: 167 ERLLGIHSVFCKPQNIREVGFDYMNRELL 195


tr_hit_id A9NPL1
Definition tr|A9NPL1|A9NPL1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 166
Score (bit) 214.0
E-value 3.0e-54
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915217|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_H07.
(549 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NPL1|A9NPL1_PICSI Putative uncharacterized protein OS=Picea... 214 3e-54
tr|A7PZS9|A7PZS9_VITVI Chromosome chr15 scaffold_40, whole genom... 192 1e-47
tr|A5BFA6|A5BFA6_VITVI Putative uncharacterized protein OS=Vitis... 192 1e-47
tr|Q654T8|Q654T8_ORYSJ Os06g0524400 protein OS=Oryza sativa subs... 180 4e-44
tr|A2YDK8|A2YDK8_ORYSI Putative uncharacterized protein OS=Oryza... 180 4e-44
tr|A5C5G9|A5C5G9_VITVI Putative uncharacterized protein OS=Vitis... 172 8e-42
tr|A7QNA5|A7QNA5_VITVI Chromosome chr2 scaffold_132, whole genom... 172 1e-41
tr|B4FPK0|B4FPK0_MAIZE Putative uncharacterized protein OS=Zea m... 167 3e-40
tr|Q9LNI0|Q9LNI0_ARATH F6F3.23 protein OS=Arabidopsis thaliana G... 160 3e-38
tr|Q84JH9|Q84JH9_ARATH Putative uncharacterized protein At1g0143... 160 3e-38
tr|Q84WC7|Q84WC7_ARATH Putative uncharacterized protein At4g0108... 158 2e-37
tr|O04621|O04621_ARATH A_IG002N01.14 protein (At4g01080) (Putati... 158 2e-37
tr|A3B153|A3B153_ORYSJ Putative uncharacterized protein OS=Oryza... 156 6e-37
tr|B6TAV4|B6TAV4_MAIZE Putative uncharacterized protein OS=Zea m... 155 1e-36
tr|B4FMK8|B4FMK8_MAIZE Putative uncharacterized protein OS=Zea m... 154 3e-36
tr|A7PAJ7|A7PAJ7_VITVI Chromosome chr14 scaffold_9, whole genome... 153 5e-36
tr|A5AQR3|A5AQR3_VITVI Putative uncharacterized protein OS=Vitis... 153 5e-36
tr|O82509|O82509_ARATH F2P3.4 protein (At4g11090) (Putative unch... 153 7e-36
tr|Q9SUP8|Q9SUP8_ARATH Putative uncharacterized protein F9D16.26... 151 2e-35
tr|Q8H1R3|Q8H1R3_ARATH Putative uncharacterized protein At4g2379... 151 2e-35
tr|Q58H56|Q58H56_BRANA Putative uncharacterized protein OS=Brass... 151 2e-35
tr|Q1KUX0|Q1KUX0_9ROSI Putative uncharacterized protein OS=Cleom... 149 7e-35
tr|A7Q2J1|A7Q2J1_VITVI Chromosome chr1 scaffold_46, whole genome... 147 3e-34
tr|B2WS75|B2WS75_ARAHA Putative uncharacterized protein OS=Arabi... 147 5e-34
tr|Q1KUX1|Q1KUX1_9ROSI Putative uncharacterized protein OS=Cleom... 145 2e-33
tr|Q1KUN5|Q1KUN5_9ROSI Putative uncharacterized protein OS=Cleom... 143 5e-33
tr|A9TJ73|A9TJ73_PHYPA Predicted protein (Fragment) OS=Physcomit... 142 2e-32
tr|Q9LFT0|Q9LFT0_ARATH Putative uncharacterized protein F1N13_40... 141 2e-32
tr|B4G268|B4G268_MAIZE Putative uncharacterized protein OS=Zea m... 140 3e-32
tr|B6TDP5|B6TDP5_MAIZE Putative uncharacterized protein OS=Zea m... 139 7e-32

>tr|A9NPL1|A9NPL1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 286

Score = 214 bits (544), Expect = 3e-54
Identities = 99/166 (59%), Positives = 119/166 (71%), Gaps = 3/166 (1%)
Frame = +2

Query: 2 DRLVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSS-DYKGVVFFRTFTPDHFENGRWD 178
D ++GCHYC N ++GFY+AYR ALR F + +S DYKG+ F RTFTPDHFENGRWD
Sbjct: 117 DEVMGCHYCPGTNFTQLGFYFAYRKALRLAFKSINTSPDYKGLTFLRTFTPDHFENGRWD 176

Query: 179 NGGNCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNRSDFTFQLHLADTIHASLLRP 358
NGG C+R P+K+NEI ++GM EMY+IQLEEF K + + + L DT ASLLRP
Sbjct: 177 NGGTCERTVPYKNNEIVMEGMNTEMYKIQLEEFEKAAKDGAARGLKFRLIDTTWASLLRP 236

Query: 359 DAHPGPYREYQPFAKGK--KAQNDCLHWCLPGAVDTWSATLLEMLR 490
D HPGPYR PFAK K K QNDCLHWCLPG +D W+ LLEML+
Sbjct: 237 DGHPGPYRYSHPFAKDKNAKVQNDCLHWCLPGPIDAWNEFLLEMLK 282


>tr|A7PZS9|A7PZS9_VITVI Chromosome chr15 scaffold_40, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026993001
PE=4 SV=1
Length = 285

Score = 192 bits (487), Expect = 1e-47
Identities = 88/165 (53%), Positives = 116/165 (70%), Gaps = 3/165 (1%)
Frame = +2

Query: 2 DRLVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDN 181
D ++GCHYC +N+ E+GF +AYR AL+ + +F+ SD+KG VF RT TPDHFENG W +
Sbjct: 118 DTVMGCHYCPGRNLTELGFEFAYRKALQMILNFVTGSDHKGFVFLRTTTPDHFENGEWFS 177

Query: 182 GGNCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNR-SDFTFQLHLADTIHASLLRP 358
GG CKR PFK EI ++ + M I+LEEF K + + ++ L L DT H SLLRP
Sbjct: 178 GGTCKRMVPFKEGEIDMRDIDRIMRDIELEEFEKVVADAGTERGVILKLLDTTHLSLLRP 237

Query: 359 DAHPGPYREYQPFAKGKKA--QNDCLHWCLPGAVDTWSATLLEML 487
D HPGPYR++ PFA+ K A QNDCLHWCLPG +D+W+ ++EML
Sbjct: 238 DGHPGPYRQFHPFAEDKNATVQNDCLHWCLPGPIDSWNDLVMEML 282


>tr|A5BFA6|A5BFA6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_044114 PE=4 SV=1
Length = 486

Score = 192 bits (487), Expect = 1e-47
Identities = 88/165 (53%), Positives = 116/165 (70%), Gaps = 3/165 (1%)
Frame = +2

Query: 2 DRLVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDN 181
D ++GCHYC +N+ E+GF +AYR AL+ + +F+ SD+KG VF RT TPDHFENG W +
Sbjct: 319 DTVMGCHYCPGRNLTELGFEFAYRKALQMILNFVTGSDHKGFVFLRTTTPDHFENGEWFS 378

Query: 182 GGNCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNR-SDFTFQLHLADTIHASLLRP 358
GG CKR PFK EI ++ + M I+LEEF K + + ++ L L DT H SLLRP
Sbjct: 379 GGTCKRMVPFKEGEIDMRDIDRIMRDIELEEFEKVVADAGTERGVILKLLDTTHLSLLRP 438

Query: 359 DAHPGPYREYQPFAKGKKA--QNDCLHWCLPGAVDTWSATLLEML 487
D HPGPYR++ PFA+ K A QNDCLHWCLPG +D+W+ ++EML
Sbjct: 439 DGHPGPYRQFHPFAEDKNATVQNDCLHWCLPGPIDSWNDLVMEML 483


>tr|Q654T8|Q654T8_ORYSJ Os06g0524400 protein OS=Oryza sativa subsp.
japonica GN=OJ1616_B03.23 PE=2 SV=1
Length = 426

Score = 180 bits (457), Expect = 4e-44
Identities = 82/163 (50%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = +2

Query: 8 LVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNGG 187
+ GCHYCQ +++ E+ F YA+R +LR F F+ SS +K VVF+RT++P HFENG W +GG
Sbjct: 261 VTGCHYCQDKSVAELTFEYAFRKSLRKTFQFITSSPHKPVVFYRTWSPSHFENGEWSSGG 320

Query: 188 NCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLL-NRSDFTFQLHLADTIHASLLRPDA 364
CKR PFK E + +M+RI+ EEF K ++ +R + +L L DT SL RPD
Sbjct: 321 TCKRTVPFKPGETGDRESDMKMWRIEREEFAKAVVHDRHNNAGRLKLLDTFELSLQRPDG 380

Query: 365 HPGPYREYQPFAK--GKKAQNDCLHWCLPGAVDTWSATLLEML 487
HPGPYR Y PF K K QNDCLHWCLPG +D W+ +++ML
Sbjct: 381 HPGPYRTYHPFEKATSAKVQNDCLHWCLPGPIDAWNDIIMQML 423


>tr|A2YDK8|A2YDK8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_23197 PE=4 SV=1
Length = 426

Score = 180 bits (457), Expect = 4e-44
Identities = 82/163 (50%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = +2

Query: 8 LVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNGG 187
+ GCHYCQ +++ E+ F YA+R +LR F F+ SS +K VVF+RT++P HFENG W +GG
Sbjct: 261 VTGCHYCQDKSVAELTFEYAFRKSLRKTFQFITSSPHKPVVFYRTWSPSHFENGEWSSGG 320

Query: 188 NCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLL-NRSDFTFQLHLADTIHASLLRPDA 364
CKR PFK E + +M+RI+ EEF K ++ +R + +L L DT SL RPD
Sbjct: 321 TCKRTVPFKPGETGDRESDMKMWRIEREEFAKAVVHDRHNNAGRLKLLDTFELSLQRPDG 380

Query: 365 HPGPYREYQPFAK--GKKAQNDCLHWCLPGAVDTWSATLLEML 487
HPGPYR Y PF K K QNDCLHWCLPG +D W+ +++ML
Sbjct: 381 HPGPYRTYHPFEKATSAKVQNDCLHWCLPGPIDAWNDIIMQML 423


>tr|A5C5G9|A5C5G9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028215 PE=4 SV=1
Length = 420

Score = 172 bits (437), Expect = 8e-42
Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Frame = +2

Query: 8 LVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNGG 187
+VGCH C +N+ +GF +AY+ AL VF+F+++S +KG++ FRT TPDHFE+G W +GG
Sbjct: 256 VVGCHSCSNKNLTXLGFDFAYQKALSFVFNFIVTSKHKGMILFRTATPDHFESGEWFSGG 315

Query: 188 NCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNRSDFTFQLHLADTIHASLLRPDAH 367
C + P K EI +G+ + + I+LEEF K + L L D SLLRPD H
Sbjct: 316 VCPKAEPVKEGEIEFKGLHSILRDIELEEFAKAEKKAQENGVNLKLLDLSKISLLRPDGH 375

Query: 368 PGPYREYQPFAKGKKA--QNDCLHWCLPGAVDTWSATLLEML 487
PGPYR + PFA K A QNDCLHWCLPG +D+W+ ++EM+
Sbjct: 376 PGPYRFFYPFASDKNATVQNDCLHWCLPGPIDSWNDVIMEMV 417


>tr|A7QNA5|A7QNA5_VITVI Chromosome chr2 scaffold_132, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002455001
PE=4 SV=1
Length = 317

Score = 172 bits (436), Expect = 1e-41
Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Frame = +2

Query: 8 LVGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNGG 187
+VGCH C +N+ +GF +AY+ AL VF+F+++S +KG++ FRT TPDHFE+G W +GG
Sbjct: 153 VVGCHSCSNKNLTVLGFDFAYQKALSFVFNFIVTSKHKGMILFRTATPDHFESGEWFSGG 212

Query: 188 NCKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNRSDFTFQLHLADTIHASLLRPDAH 367
C + P K EI +G+ + + I+LEEF K + L L D SLLRPD H
Sbjct: 213 VCPKAEPVKEGEIEFKGLHSILRDIELEEFAKAEKKAQENGVNLKLLDLSKISLLRPDGH 272

Query: 368 PGPYREYQPFAKGKKA--QNDCLHWCLPGAVDTWSATLLEML 487
PGPYR + PFA K A QNDCLHWCLPG +D+W+ ++EM+
Sbjct: 273 PGPYRFFYPFASDKNATVQNDCLHWCLPGPIDSWNDVIMEMV 314


>tr|B4FPK0|B4FPK0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 456

Score = 167 bits (424), Expect = 3e-40
Identities = 78/161 (48%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = +2

Query: 11 VGCHYCQRQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNGGN 190
+GCH CQ + ++E Y++R ALR F F+ SS +K VVF+RT+ P HFENG W +GG
Sbjct: 296 IGCHSCQNKTLEERPPEYSFRRALRVAFQFITSSPHKPVVFYRTWAPSHFENGEWFSGGT 355

Query: 191 CKRKGPFKSNEISLQGMTAEMYRIQLEEFGKTLLNRSDFTFQLHLADTIHASLLRPDAHP 370
C R PFK E + M+RI+ EEF + D +L L DT SLLRPD HP
Sbjct: 356 CNRTAPFKPGEAGDREWDNSMWRIEREEFHNAVPIGGD---RLKLLDTFELSLLRPDGHP 412

Query: 371 GPYREYQPFAKG--KKAQNDCLHWCLPGAVDTWSATLLEML 487
GPYR Y P+ KG K QNDCLHWCLPG +D W+ +++M+
Sbjct: 413 GPYRAYHPYEKGVTAKVQNDCLHWCLPGPIDAWNDVIMKMV 453


>tr|Q9LNI0|Q9LNI0_ARATH F6F3.23 protein OS=Arabidopsis thaliana
GN=F6F3.23 PE=4 SV=1
Length = 442

Score = 160 bits (406), Expect = 3e-38
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Frame = +2

Query: 8 LVGCHYCQ-RQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNG 184
+ GCHYCQ + N+ E+G+ Y+YR L V DF+ ++K V FRT TPDHFENG WD+G
Sbjct: 266 VTGCHYCQGKNNMTELGYLYSYRKVLHLVLDFVAEPNHKAQVLFRTTTPDHFENGEWDSG 325

Query: 185 GNCKRKGPF-KSNEISLQGMTAEMYRIQLEEFGKTLLNRSD-FTFQLHLADTIHASLLRP 358
G C R PF + +E ++ M I+LEEF KT + + + L DT SLLRP
Sbjct: 326 GFCNRTMPFTEGSEGEMKSEDVSMRDIELEEFYKTTTTQQEGSNSNIVLLDTTSMSLLRP 385

Query: 359 DAHPGPYREYQPFAKGK-----KAQNDCLHWCLPGAVDTWSATLLEML 487
D HPGPYR PFA K + QNDCLHWCLPG +D+W+ ++E++
Sbjct: 386 DGHPGPYRYPNPFAGLKNKELNQVQNDCLHWCLPGPIDSWNDLMVEVM 433


>tr|Q84JH9|Q84JH9_ARATH Putative uncharacterized protein At1g01430
OS=Arabidopsis thaliana GN=At1g01430 PE=2 SV=1
Length = 456

Score = 160 bits (406), Expect = 3e-38
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Frame = +2

Query: 8 LVGCHYCQ-RQNIKEIGFYYAYRMALRTVFDFLLSSDYKGVVFFRTFTPDHFENGRWDNG 184
+ GCHYCQ + N+ E+G+ Y+YR L V DF+ ++K V FRT TPDHFENG WD+G
Sbjct: 280 VTGCHYCQGKNNMTELGYLYSYRKVLHLVLDFVAEPNHKAQVLFRTTTPDHFENGEWDSG 339

Query: 185 GNCKRKGPF-KSNEISLQGMTAEMYRIQLEEFGKTLLNRSD-FTFQLHLADTIHASLLRP 358
G C R PF + +E ++ M I+LEEF KT + + + L DT SLLRP
Sbjct: 340 GFCNRTMPFTEGSEGEMKSEDVSMRDIELEEFYKTTTTQQEGSNSNIVLLDTTSMSLLRP 399

Query: 359 DAHPGPYREYQPFAKGK-----KAQNDCLHWCLPGAVDTWSATLLEML 487
D HPGPYR PFA K + QNDCLHWCLPG +D+W+ ++E++
Sbjct: 400 DGHPGPYRYPNPFAGLKNKELNQVQNDCLHWCLPGPIDSWNDLMVEVM 447