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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915218
Clone id YMU001_000067_H08
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGGAAGAATTTGCGGCCGCAGGAATGTTATAGGGATCTGAAAGTCAAGAAGAGCCGG
GGCCACATCCACTTGTCTTGTGATGAGAATAGGGTTACATTTCATAACCAAGATGAGATG
GCTGGTCTAATGGTGAACTATACAAGTCAAATTATTGGCCAGACAGAGATCCAAAAAGTG
GATGGAGCCAGAGAAACTTTGCTTGAGAGTGTTGTGAAGAAAGCTCCCCAATAAGAAGCC
AACCTCCTAAAAGGAGAATTCTCTGAAGACGAATGTTCACTAGCATTACAAGCTCTTGGC
AAGGAGAAGTCCCCCGGATGCGATGGGATGGGATGATGGTTGAGTTCTTTAGAGAATTTT
GGGATGATTTCAAGGTCCCAGGCATGCGGTTGGCTAACCAAGCCATTATCGAAGAGTCGC
TTGATACAAGTGTGAAGAGAAAGATTATCAAATCCATCCCCAAATAGGTTTGCTGCTCTC
AACTAAAGTTTTAGCGCCCTATTATGATGATGTCAGTACCTTACAAAATTATTGC
■■Homology search results ■■ -
sp_hit_id P14381
Definition sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis
Align length 69
Score (bit) 44.7
E-value 3.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915218|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_H08.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot...    45   3e-06
sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 O...    27   0.15 
sp|P39869|NIA_LOTJA Nitrate reductase [NADH] OS=Lotus japonicus ...    33   1.00 
sp|P08509|NIA2_TOBAC Nitrate reductase [NADH] 2 OS=Nicotiana tab...    33   1.00 
sp|P11605|NIA1_TOBAC Nitrate reductase [NADH] 1 OS=Nicotiana tab...    33   1.00 
sp|P39870|NIA2_SOYBN Inducible nitrate reductase [NADH] 2 OS=Gly...    32   1.3  
sp|Q9FNL8|PTR3B_ARATH Putative peptide transporter PTR3-B OS=Ara...    31   3.8  
sp|P17570|NIA_SOLLC Nitrate reductase [NADH] OS=Solanum lycopers...    31   3.8  
sp|Q8CDI6|YD007_MOUSE Coiled-coil domain-containing protein FLJ2...    30   6.5  
sp|P17569|NIA_CUCMA Nitrate reductase [NADH] OS=Cucurbita maxima...    30   8.4  

>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
           OS=Xenopus laevis PE=4 SV=1
          Length = 1308

 Score = 44.7 bits (104), Expect(2) = 3e-06
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
           DG+ +EFF+ FWD       R+  +A  +  L  S +R ++  +PK      +K  RP+ 
Sbjct: 470 DGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVS 529

Query: 479 MMSVPYKII 505
           ++S  YKI+
Sbjct: 530 LLSTDYKIV 538



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 240 DECSLALQALGKEKSPGCDGM 302
           DE S AL+ +   KSPG DG+
Sbjct: 452 DELSQALRLMPHNKSPGLDGL 472


>sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1
           OS=Mus musculus GN=Pol PE=2 SV=2
          Length = 1281

 Score = 26.9 bits (58), Expect(2) = 0.15
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK-*VCCSQLKF*RPI 475
           DG   EF++ F +D      +L ++  +E +L  S     I  IPK     ++++  RPI
Sbjct: 481 DGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPI 540

Query: 476 MMMSVPYKII 505
            +M++  KI+
Sbjct: 541 SLMNIDAKIL 550



 Score = 26.6 bits (57), Expect(2) = 0.15
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 135 TEIQKVDGARETLLESVVKKAPQ*EANLLKGEFSEDECSLALQALGKEKSPGCDG 299
           T+++ +D   + L    V K  Q + + L    S  E    + +L  +KSPG DG
Sbjct: 428 TKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDG 482


>sp|P39869|NIA_LOTJA Nitrate reductase [NADH] OS=Lotus japonicus
           GN=NIA PE=3 SV=1
          Length = 900

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = +2

Query: 101 NGELYKSNYWP-DRDPKSGWSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW-- 271
           N E+  S   P D+     W  RN +        P  S+PP  R++     T +   +  
Sbjct: 66  NAEIESSVLDPRDQGTADNWISRNSSMVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVR 125

Query: 272 -QGEVPRMRWDGMMVE 316
             G VP+ RWD   VE
Sbjct: 126 NHGPVPKARWDDWTVE 141


>sp|P08509|NIA2_TOBAC Nitrate reductase [NADH] 2 OS=Nicotiana
           tabacum GN=NIA2 PE=2 SV=2
          Length = 904

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +2

Query: 134 DRDPKSGWSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW---QGEVPRMRWDG 304
           D      W +RNF+        P  S+PP  R++     T +   +    G VP+  WD 
Sbjct: 89  DEGTADNWIERNFSMIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVPKGTWDD 148

Query: 305 MMVE 316
             VE
Sbjct: 149 WTVE 152


>sp|P11605|NIA1_TOBAC Nitrate reductase [NADH] 1 OS=Nicotiana
           tabacum GN=NIA1 PE=3 SV=1
          Length = 904

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +2

Query: 134 DRDPKSGWSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW---QGEVPRMRWDG 304
           D      W +RNF+        P  S+PP  R++     T +   +    G VP+  WD 
Sbjct: 89  DEGTADNWIERNFSLIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVPKGTWDD 148

Query: 305 MMVE 316
             VE
Sbjct: 149 WTVE 152


>sp|P39870|NIA2_SOYBN Inducible nitrate reductase [NADH] 2
           OS=Glycine max GN=INR2 PE=2 SV=1
          Length = 890

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
 Frame = +2

Query: 107 ELYKSNYWPDRDPKSG-WSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW---Q 274
           E+  S + P  D  S  W QRN +        P  S+PP  R++     T +   +    
Sbjct: 65  EVESSIFDPRDDGTSDHWIQRNSSLVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNH 124

Query: 275 GEVPRMRWDGMMVE 316
           G VPR RW+   VE
Sbjct: 125 GPVPRARWEDWTVE 138


>sp|Q9FNL8|PTR3B_ARATH Putative peptide transporter PTR3-B
           OS=Arabidopsis thaliana GN=PTR3-B PE=3 SV=1
          Length = 586

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +3

Query: 216 LLKGEFSEDECSLALQALGKEKSPGCDGMG*WLSS--LENFGMISRSQACGWLTKPLSKS 389
           + K EF  D+   ++++LG   +     +G ++SS  L +   I++ Q  GW+   L++S
Sbjct: 475 IAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWIQNNLNES 534

Query: 390 RL 395
           RL
Sbjct: 535 RL 536


>sp|P17570|NIA_SOLLC Nitrate reductase [NADH] OS=Solanum
           lycopersicum GN=NIA PE=3 SV=1
          Length = 911

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +2

Query: 134 DRDPKSGWSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW---QGEVPRMRWDG 304
           D      W +RNF+        P  S+PP  R++     T +   +    G VP+  W  
Sbjct: 94  DEGTADNWIERNFSLIRLTGKHPFNSEPPLSRLMHHGFITPVPLHYVRNHGPVPKASWSD 153

Query: 305 MMVE 316
             VE
Sbjct: 154 WTVE 157


>sp|Q8CDI6|YD007_MOUSE Coiled-coil domain-containing protein FLJ25770
            homolog OS=Mus musculus PE=2 SV=1
          Length = 1109

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 331  KFSKELNHHPIPSHPGDFSLPRAC 260
            K S+ L+  P+P HPGD   P +C
Sbjct: 966  KSSETLSREPVPLHPGDLEDPSSC 989


>sp|P17569|NIA_CUCMA Nitrate reductase [NADH] OS=Cucurbita maxima
           PE=2 SV=1
          Length = 918

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 23/110 (20%)
 Frame = +2

Query: 134 DRDPKSGWSQRNFA*ECCEESSPIRSQPPKRRIL*RRMFTSITSSW---QGEVPRMRW-- 298
           D      W +RN +        P  S+PP  R++     T +   +    G VP+ +W  
Sbjct: 101 DEGTADNWIERNASMVRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGVVPKAKWAD 160

Query: 299 -----------------DGMMVEF-FREFWDDFKVPGMRLANQAIIEESL 394
                            D ++ EF FREF       G R   Q ++++S+
Sbjct: 161 WTVEVCGLVKRPAKFTMDQLLNEFRFREFPATLVCAGNRRKEQNMVKQSI 210
tr_hit_id Q53PY1
Definition tr|Q53PY1|Q53PY1_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica
Align length 68
Score (bit) 37.0
E-value 0.0007
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915218|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_H08.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q53PY1|Q53PY1_ORYSJ Retrotransposon protein, putative, unclas...    37   7e-04
tr|Q9C697|Q9C697_ARATH Reverse transcriptase, putative; 16838-20...    33   7e-04
tr|Q2QT44|Q2QT44_ORYSJ Retrotransposon protein, putative, unclas...    36   0.002
tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P...    42   0.002
tr|Q75LU1|Q75LU1_ORYSJ Putative endonuclease/exonuclease/phospha...    34   0.002
tr|Q10HY9|Q10HY9_ORYSJ Retrotransposon protein, putative, unclas...    34   0.003
tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridi...    41   0.003
tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse tra...    33   0.004
tr|Q76IM3|Q76IM3_TETNG Pol-like protein OS=Tetraodon nigroviridi...    44   0.004
tr|Q0D4Q0|Q0D4Q0_ORYSJ Os07g0613900 protein OS=Oryza sativa subs...    32   0.007
tr|A3BM55|A3BM55_ORYSJ Putative uncharacterized protein OS=Oryza...    32   0.007
tr|A5BQD9|A5BQD9_VITVI Putative uncharacterized protein OS=Vitis...    32   0.009
tr|A3BHU0|A3BHU0_ORYSJ Putative uncharacterized protein OS=Oryza...    33   0.009
tr|A5APU1|A5APU1_VITVI Putative uncharacterized protein OS=Vitis...    33   0.012
tr|Q76IL9|Q76IL9_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P...    37   0.012
tr|Q94H40|Q94H40_ORYSA Putative reverse transcriptase OS=Oryza s...    33   0.012
tr|Q10IA6|Q10IA6_ORYSJ Retrotransposon protein, putative, unclas...    33   0.012
tr|A3AJK1|A3AJK1_ORYSJ Putative uncharacterized protein OS=Oryza...    33   0.012
tr|A5BWI2|A5BWI2_VITVI Putative uncharacterized protein OS=Vitis...    32   0.012
tr|A5BAV2|A5BAV2_VITVI Putative uncharacterized protein OS=Vitis...    31   0.012
tr|A5CBF2|A5CBF2_VITVI Putative uncharacterized protein OS=Vitis...    31   0.015
tr|A5B4A5|A5B4A5_VITVI Putative uncharacterized protein OS=Vitis...    31   0.015
tr|A5BBH2|A5BBH2_VITVI Putative uncharacterized protein (Fragmen...    30   0.019
tr|A5B9F0|A5B9F0_VITVI Putative uncharacterized protein OS=Vitis...    32   0.025
tr|A5AJ92|A5AJ92_VITVI Putative uncharacterized protein OS=Vitis...    30   0.033
tr|A5C6D8|A5C6D8_VITVI Putative uncharacterized protein OS=Vitis...    33   0.041
tr|A5CBJ9|A5CBJ9_VITVI Putative uncharacterized protein OS=Vitis...    30   0.041
tr|Q9SY58|Q9SY58_ARATH F14N23.4 OS=Arabidopsis thaliana PE=4 SV=1      32   0.042
tr|Q0WPN1|Q0WPN1_ARATH Putative reverse transcriptase OS=Arabido...    32   0.043
tr|A5ANF1|A5ANF1_VITVI Putative uncharacterized protein OS=Vitis...    31   0.053

>tr|Q53PY1|Q53PY1_ORYSJ Retrotransposon protein, putative,
            unclassified OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g05210 PE=4 SV=1
          Length = 1319

 Score = 37.0 bits (84), Expect(2) = 7e-04
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +2

Query: 299  DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
            DG   EF+++FWD  K   M L N+          +   ++  +PK    +Q++  RPI 
Sbjct: 924  DGFPAEFYQKFWDVIKHDLMNLFNEFHTGSLPIFGLNFGVLTLVPKVKEANQIQQYRPIC 983

Query: 479  MMSVPYKI 502
            +++V YKI
Sbjct: 984  LLNVSYKI 991



 Score = 28.9 bits (63), Expect(2) = 7e-04
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
 Frame = +3

Query: 6    RDLKVKKSRGHIHLSCDENRVTFHNQDEMAGLMVNYTSQIIGQTEIQKVDGARETLLESV 185
            R+ ++K  +    L  DE ++     + +   + ++  ++ G  E         +L ES+
Sbjct: 832  REEEIKWKKRIFFLDQDEGKI--EGVEALKTYITSFYRKLFGPPEENSF-----SLDESI 884

Query: 186  V---KKAPQ*EANLLKGEFSEDECSLALQALGKEKSPGCDG 299
            +    +  Q E + L   FSE+E   A+ A+   K+PG DG
Sbjct: 885  IGDMAQVSQAENDFLTAPFSEEEVKEAIFAMEHNKAPGLDG 925


>tr|Q9C697|Q9C697_ARATH Reverse transcriptase, putative; 16838-20266
           OS=Arabidopsis thaliana GN=T6B12.3 PE=4 SV=1
          Length = 1142

 Score = 33.5 bits (75), Expect(2) = 7e-04
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
           DGM   FF++ W   K   + L N  + E   D  +    I  IPK    +++   RPI 
Sbjct: 233 DGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPIS 292

Query: 479 MMSVPYKII 505
           + +V YK+I
Sbjct: 293 LCNVGYKVI 301



 Score = 32.3 bits (72), Expect(2) = 7e-04
 Identities = 25/96 (26%), Positives = 42/96 (43%)
 Frame = +3

Query: 15  KVKKSRGHIHLSCDENRVTFHNQDEMAGLMVNYTSQIIGQTEIQKVDGARETLLESVVKK 194
           K +++R  I    DEN +     D++  + V+Y   +      Q  D A   +   +  +
Sbjct: 144 KQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDR 203

Query: 195 APQ*EANLLKGEFSEDECSLALQALGKEKSPGCDGM 302
                 +LL  + +E E   AL  +  EK+PG DGM
Sbjct: 204 IN----DLLTADATECEVRAALFMIHPEKAPGPDGM 235


>tr|Q2QT44|Q2QT44_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g21910 PE=4 SV=1
          Length = 839

 Score = 36.2 bits (82), Expect(2) = 0.002
 Identities = 24/94 (25%), Positives = 41/94 (43%)
 Frame = +3

Query: 21  KKSRGHIHLSCDENRVTFHNQDEMAGLMVNYTSQIIGQTEIQKVDGARETLLESVVKKAP 200
           ++ R  I    ++  V   N++E  G++  Y   +         D     LL+ V +K  
Sbjct: 240 RRRRNKIGRLKNDEGVWVENEEEKRGMIAQYFKTLFSSNRGNNSD----QLLDVVERKVT 295

Query: 201 Q*EANLLKGEFSEDECSLALQALGKEKSPGCDGM 302
           +    LL   +  +E   AL ++G  K+PG DGM
Sbjct: 296 EDMNELLTSAYISEEIKEALDSIGDLKAPGPDGM 329



 Score = 28.5 bits (62), Expect(2) = 0.002
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLD-----TSVKRKIIKSIPK*VCCSQLKF 463
           DGM   F++ FWD   + G ++ ++  ++E L+            I  IPK      +K 
Sbjct: 327 DGMPAVFYKNFWD---LMGEKITSE--VQEILNGGQIPQEWNETTIVLIPKVKTFELIKD 381

Query: 464 *RPIMMMSVPYKII 505
            RPI + +V YKI+
Sbjct: 382 LRPISVCNVLYKIV 395


>tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4
           SV=1
          Length = 1329

 Score = 41.6 bits (96), Expect(2) = 0.002
 Identities = 17/69 (24%), Positives = 39/69 (56%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
           DG+  EF++ FW +  +  +++ N+++    L  S +R ++  +PK    + +K  RP+ 
Sbjct: 505 DGLPAEFYKTFWKEVGLDLLQVINESLAYGQLPLSCRRAVLTLLPKKGDLNDIKNWRPVS 564

Query: 479 MMSVPYKII 505
           ++   YK++
Sbjct: 565 LLCTDYKLL 573



 Score = 22.7 bits (47), Expect(2) = 0.002
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 219 LKGEFSEDECSLALQALGKEKSPGCDGM 302
           LK   + +E   ALQ++   K PG DG+
Sbjct: 480 LKKAVTLEELQKALQSMECNKVPGIDGL 507


>tr|Q75LU1|Q75LU1_ORYSJ Putative endonuclease/exonuclease/phosphatase
            family protein OS=Oryza sativa subsp. japonica
            GN=OSJNBb0015I21.7 PE=4 SV=1
          Length = 1801

 Score = 34.3 bits (77), Expect(2) = 0.002
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +2

Query: 299  DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
            DG  VEF++ FW+  K   M L     + +    S+   II  +PK    ++++  RPI 
Sbjct: 1588 DGFPVEFYQNFWEVIKDDLMNLFRDFHVGDLPLFSLNFGIITLLPKVHEANRIQQYRPIC 1647

Query: 479  MMSVPYKI 502
            +++V +KI
Sbjct: 1648 LLNVSFKI 1655



 Score = 29.6 bits (65), Expect(2) = 0.002
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
 Frame = +3

Query: 21   KKSRGHIHLSCDENRVTFHNQDEMAG------LMVNYTSQIIGQTEIQKVDGARETLLES 182
            K+ +  +    DE  +T  ++ ++ G       +  +   + G  E   +     TL ES
Sbjct: 1493 KQEKNTVQNIIDELDITAEDEGKIEGNIALKSYITKFYKNLFGPPEDTSI-----TLDES 1547

Query: 183  VVKKAPQ*---EANLLKGEFSEDECSLALQALGKEKSPGCDG 299
             ++  PQ    E   L   FSEDE   A+  +   K+PG DG
Sbjct: 1548 RIEDIPQVMNEENEFLTAPFSEDEIQGAVFEMEHNKAPGLDG 1589


>tr|Q10HY9|Q10HY9_ORYSJ Retrotransposon protein, putative,
            unclassified OS=Oryza sativa subsp. japonica
            GN=LOC_Os03g37394 PE=4 SV=1
          Length = 1239

 Score = 34.3 bits (77), Expect(2) = 0.003
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +2

Query: 299  DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
            DG  VEF++ FW+  K   M L     + +    S+   II  +PK    ++++  RPI 
Sbjct: 1026 DGFPVEFYQNFWEVIKDDLMNLFRDFHVGDLPLFSLNFGIITLLPKVHEANRIQQYRPIC 1085

Query: 479  MMSVPYKI 502
            +++V +KI
Sbjct: 1086 LLNVSFKI 1093



 Score = 29.6 bits (65), Expect(2) = 0.003
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
 Frame = +3

Query: 21   KKSRGHIHLSCDENRVTFHNQDEMAG------LMVNYTSQIIGQTEIQKVDGARETLLES 182
            K+ +  +    DE  +T  ++ ++ G       +  +   + G  E   +     TL ES
Sbjct: 931  KQEKNTVQNIIDELDITAEDEGKIEGNIALKSYITKFYKNLFGPPEDTSI-----TLDES 985

Query: 183  VVKKAPQ*---EANLLKGEFSEDECSLALQALGKEKSPGCDG 299
             ++  PQ    E   L   FSEDE   A+  +   K+PG DG
Sbjct: 986  RIEDIPQVMNEENEFLTAPFSEDEIQGAVFEMEHNKAPGLDG 1027


>tr|Q76IM5|Q76IM5_TETNG Pol-like protein OS=Tetraodon nigroviridis
           GN=ORF2 PE=4 SV=1
          Length = 1318

 Score = 40.8 bits (94), Expect(2) = 0.003
 Identities = 18/69 (26%), Positives = 38/69 (55%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPIM 478
           +G+ VEF++ +WD      + + N+++   SL  S +R ++  +PK      ++  RP+ 
Sbjct: 494 NGLTVEFYKAYWDIVAPDLLEVFNESLSSGSLPVSCRRAVMALLPKKGNLQDIRNWRPVS 553

Query: 479 MMSVPYKII 505
           ++   YKI+
Sbjct: 554 LLCTDYKIL 562



 Score = 22.7 bits (47), Expect(2) = 0.003
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +3

Query: 162 RETLLESVVKKAPQ*EANL---LKGEFSEDECSLALQALGKEKSPGCDGM 302
           RE L E      PQ        L G  S  E   ALQ +   ++PG +G+
Sbjct: 447 REDLFEEFCGGLPQVSEATNVRLDGPLSVSELHAALQRMQGRRAPGINGL 496


>tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse
            transcriptase OS=Arabidopsis thaliana GN=At2g01840 PE=2
            SV=1
          Length = 1715

 Score = 33.5 bits (75), Expect(2) = 0.004
 Identities = 22/99 (22%), Positives = 42/99 (42%)
 Frame = +3

Query: 3    YRDLKVKKSRGHIHLSCDENRVTFHNQDEMAGLMVNYTSQIIGQTEIQKVDGARETLLES 182
            Y   K++KSR  I    D   +     D +  +  NY + +   T+        E ++  
Sbjct: 718  YASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTSDW----EEIISG 773

Query: 183  VVKKAPQ*EANLLKGEFSEDECSLALQALGKEKSPGCDG 299
            +  K  +   + L    ++ E   A+ A+G +++PG DG
Sbjct: 774  IAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDG 812



 Score = 29.6 bits (65), Expect(2) = 0.004
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = +2

Query: 296  WDGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQLKF*RPI 475
            +DG    F+   WD        +       + +D  + +  I  IPK +    +   RPI
Sbjct: 810  FDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPI 869

Query: 476  MMMSVPYKII 505
             + +  YKII
Sbjct: 870  SLCTASYKII 879


>tr|Q76IM3|Q76IM3_TETNG Pol-like protein OS=Tetraodon nigroviridis
           GN=ORF2 PE=4 SV=1
          Length = 1302

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 24/77 (31%), Positives = 41/77 (53%)
 Frame = +2

Query: 275 GEVPRMRWDGMMVEFFREFWDDFKVPGMRLANQAIIEESLDTSVKRKIIKSIPK*VCCSQ 454
           G+ P M  DG+ VEF++ FWD      + + + ++    L  S +R +I  +PK     +
Sbjct: 476 GKAPGM--DGLPVEFYKSFWDVICTDLLEVVSDSLRTGRLPLSCRRAVITLLPKKGDPQE 533

Query: 455 LKF*RPIMMMSVPYKII 505
           LK  RP+ ++   YKI+
Sbjct: 534 LKNWRPVSLLCTDYKIL 550


>tr|Q0D4Q0|Q0D4Q0_ORYSJ Os07g0613900 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0613900 PE=4 SV=1
          Length = 1453

 Score = 32.3 bits (72), Expect(2) = 0.007
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 165 ETLLESVVKKAPQ*EANLLKGEFSEDECSLALQALGKEKSPGCDGM 302
           E LL  V KK  +     L  EF  +E   ++ ++G  K+PG DGM
Sbjct: 655 ERLLSKVKKKVTEEMNECLMAEFIVEEIKTSIDSIGDLKAPGPDGM 700



 Score = 30.0 bits (66), Expect(2) = 0.007
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +2

Query: 299 DGMMVEFFREFWDDFKVPGMRLANQA---IIEESLDTSVKRKIIKSIPK*VCCSQLKF*R 469
           DGM   F++ FWD   V G ++ ++    +    +        I  IPK     Q+K  R
Sbjct: 698 DGMPAVFYKNFWD---VVGGKVTSEVLDILNGGQMPLGWNETTIVLIPKVKQPEQIKDLR 754

Query: 470 PIMMMSVPYKII 505
           PI + +V YKI+
Sbjct: 755 PISLRNVLYKIV 766