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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915224
Clone id YMU001_000069_A03
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGAAAAGAAATTCTATGATGCAAAGGCTGGAGGTTGACCTTCTTTTTCCTTGCAGCTCTT
GGCAATACAGAACGTGCAGGAAGTCTTGAACTGCTTTTTCAAATTGGAGATAGAGGGGAG
GGTGAGAGAGTGAAAGTTGAGCACACCACAGTGATCGTGAAAGGGCTAGACAGGTTTCCA
GCACCTCAAGCCTGAGAGGATGAATGCGGCAAATATTTTTGAGAAGTTGAGGATCCTCTC
TGGGACTTGTGAGGATGTCTTCAAGGATGCTTCTGACAAGGAGAAGGATGCCTTGCGGGA
ATTGATACCACTAGGATTTGACTCACAAAGATTTATGGAGGACAAGGATGATGTCATGCA
AGTGGAATATGAATGAAGCCTTTTGGTATTCTGCCAATACTGAACTAAGGTAGATCGAAT
GCTTTAGTCTATAAAATAGATTCATTTTGTACTTCGA
■■Homology search results ■■ -
sp_hit_id Q8K1L0
Definition sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 OS=Mus musculus
Align length 49
Score (bit) 29.6
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915224|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_A03.
         (457 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    30   6.4  
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ...    30   6.4  
sp|Q7VL38|UBIA_HAEDU 4-hydroxybenzoate octaprenyltransferase OS=...    30   6.6  
sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=...    30   6.6  
sp|Q9ULL8|SHRM4_HUMAN Protein Shroom4 OS=Homo sapiens GN=SHROOM4...    29   8.6  
sp|Q7MBQ5|CHEB2_VIBVY Chemotaxis response regulator protein-glut...    29   8.6  
sp|Q8D4X6|CHEB2_VIBVU Chemotaxis response regulator protein-glut...    29   8.6  

>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 305 SIPARHPSPCQ-KHP*RHPHKSQRGSSTSQKYLPHSSSQA*GAGNLSSP 162
           ++P  HP P Q +HP  HPH           +  HS   A  A + +SP
Sbjct: 132 TLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 180


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
           OS=Homo sapiens GN=CREB5 PE=1 SV=2
          Length = 508

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 305 SIPARHPSPCQ-KHP*RHPHKSQRGSSTSQKYLPHSSSQA*GAGNLSSP 162
           ++P  HP P Q +HP  HPH           +  HS   A  A + +SP
Sbjct: 283 TLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 331


>sp|Q7VL38|UBIA_HAEDU 4-hydroxybenzoate octaprenyltransferase
           OS=Haemophilus ducreyi GN=ubiA PE=3 SV=1
          Length = 277

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +2

Query: 311 LGFDSQRFMEDKDDVMQVEYE*SLLVFCQY*TKVDRML*SIK*IHFVL 454
           + +D+Q  M D+DD +++  + + ++F QY  K+  +L  +  I F+L
Sbjct: 168 VAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIALLQFLSLILFIL 215


>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus
           musculus GN=Tdpoz2 PE=2 SV=1
          Length = 364

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = -2

Query: 330 LCESNPS-GINSRKASFSLSEASLKTSSQVPERILNFSKIFAAFILSGLRCWKPV*PFHD 154
           +CE +    ++   A+ +L  A L ++ Q+  R L+F  + A+ + S    WK +   H 
Sbjct: 278 ICEDSLCRNLSVENAAHTLIVADLHSTEQLKTRALHFIAVHASEV-SKSSGWKSMVESHP 336

Query: 153 HCGVLNFHSLTLPSISNLKKQFK 85
           H     FHSL       L+  FK
Sbjct: 337 HLVDERFHSLASAQSVFLESSFK 359


>sp|Q9ULL8|SHRM4_HUMAN Protein Shroom4 OS=Homo sapiens GN=SHROOM4 PE=1
            SV=2
          Length = 1498

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 19/84 (22%), Positives = 33/84 (39%)
 Frame = -2

Query: 303  NSRKASFSLSEASLKTSSQVPERILNFSKIFAAFILSGLRCWKPV*PFHDHCGVLNFHSL 124
            +S    +  ++ S  + S +      +S+ FA+  L    C KP+     HCG  ++H  
Sbjct: 831  HSADQPYHATDQSYHSMSPLQSETPTYSECFASKGLENSMCCKPL-----HCGDFDYHRT 885

Query: 123  TLPSISNLKKQFKTSCTFCIAKSC 52
               S S         C +C  + C
Sbjct: 886  CSYSCSVQGALVHDPCIYCSGEIC 909


>sp|Q7MBQ5|CHEB2_VIBVY Chemotaxis response regulator
           protein-glutamate methylesterase of group 2 operon
           OS=Vibrio vulnificus (strain YJ016) GN=cheB2 PE=3 SV=1
          Length = 345

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -1

Query: 280 LVRSILEDILTSPREDP-----QLLKNICRIHPLRLEVLET 173
           +++++  D+LT   E P     Q LKN+ R+HPL + ++ T
Sbjct: 46  MIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMIST 86


>sp|Q8D4X6|CHEB2_VIBVU Chemotaxis response regulator
           protein-glutamate methylesterase of group 2 operon
           OS=Vibrio vulnificus GN=cheB2 PE=3 SV=1
          Length = 344

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -1

Query: 280 LVRSILEDILTSPREDP-----QLLKNICRIHPLRLEVLET 173
           +++++  D+LT   E P     Q LKN+ R+HPL + ++ T
Sbjct: 45  MIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMIST 85
tr_hit_id A6CIV8
Definition tr|A6CIV8|A6CIV8_9BACI Putative uncharacterized protein OS=Bacillus sp. SG-1
Align length 71
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915224|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_A03.
         (457 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6CIV8|A6CIV8_9BACI Putative uncharacterized protein OS=Bacil...    35   1.9  
tr|Q8WQF4|Q8WQF4_CAEEL Protein F37D6.2b, partially confirmed by ...    33   5.4  
tr|Q20130|Q20130_CAEEL Protein F37D6.2a, partially confirmed by ...    33   5.4  
tr|A5JYT9|A5JYT9_CAEEL Protein F37D6.2c, confirmed by transcript...    33   5.4  
tr|Q9L9X2|Q9L9X2_RHORU (R)-specific trans-2,3-enoylacyl-CoA hydr...    33   5.4  
tr|A6GPL8|A6GPL8_9BURK Putative uncharacterized protein OS=Limno...    33   9.2  
tr|Q4JFB7|Q4JFB7_CAEEL Protein T02E1.3a, partially confirmed by ...    33   9.3  
tr|O02289|O02289_CAEEL Protein T02E1.3b, partially confirmed by ...    33   9.3  

>tr|A6CIV8|A6CIV8_9BACI Putative uncharacterized protein OS=Bacillus
           sp. SG-1 GN=BSG1_04460 PE=4 SV=1
          Length = 177

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = -1

Query: 454 KYKMNLFYRLKHSIYLSSVLAEYQKASFIFHLHDIILVLHKSL*VKS*WYQFPQGILLLV 275
           K+ + LF  +    Y+   L    + S++F     +L+L+K + + + WY+    ILL++
Sbjct: 26  KFILFLFIIMVSKRYIKGNLNRIDRTSYLFFNICFVLLLYKFVSLNTNWYKVKDNILLVI 85

Query: 274 RSILEDILTSP 242
            S ++ IL  P
Sbjct: 86  ASDIDRILLLP 96


>tr|Q8WQF4|Q8WQF4_CAEEL Protein F37D6.2b, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=F37D6.2
           PE=2 SV=1
          Length = 581

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 268 ILEDILTSPREDPQLLKNICRIHPLRLEVLETCLA 164
           ILEDI+  P +D  LLK + + H   LE++E C A
Sbjct: 540 ILEDIVYQPIDDLPLLKMLSKNHDKSLEIMEKCTA 574


>tr|Q20130|Q20130_CAEEL Protein F37D6.2a, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=F37D6.2
           PE=2 SV=1
          Length = 582

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 268 ILEDILTSPREDPQLLKNICRIHPLRLEVLETCLA 164
           ILEDI+  P +D  LLK + + H   LE++E C A
Sbjct: 541 ILEDIVYQPIDDLPLLKMLSKNHDKSLEIMEKCTA 575


>tr|A5JYT9|A5JYT9_CAEEL Protein F37D6.2c, confirmed by transcript
           evidence OS=Caenorhabditis elegans GN=F37D6.2 PE=4 SV=1
          Length = 584

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 268 ILEDILTSPREDPQLLKNICRIHPLRLEVLETCLA 164
           ILEDI+  P +D  LLK + + H   LE++E C A
Sbjct: 543 ILEDIVYQPIDDLPLLKMLSKNHDKSLEIMEKCTA 577


>tr|Q9L9X2|Q9L9X2_RHORU (R)-specific trans-2,3-enoylacyl-CoA
           hydratase OS=Rhodospirillum rubrum GN=phaJ PE=4 SV=1
          Length = 334

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -3

Query: 395 GRIPKGFIHIPLA*HHPCPP*IFVSQILVVSIPARHPSPCQKHP*RHPHKSQRGSSTSQK 216
           G +  GFI   L    P P  I+V+Q   V     H    ++H  RH H+ + GS    +
Sbjct: 63  GMLSAGFISAVLGNRLPGPGAIYVNQSAEVQGTGAH----RRHGHRHRHRHRAGSRKEIR 118

Query: 215 YLPH 204
           +LPH
Sbjct: 119 HLPH 122


>tr|A6GPL8|A6GPL8_9BURK Putative uncharacterized protein
           OS=Limnobacter sp. MED105 GN=LMED105_08090 PE=4 SV=1
          Length = 233

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/36 (38%), Positives = 27/36 (75%)
 Frame = -2

Query: 276 SEASLKTSSQVPERILNFSKIFAAFILSGLRCWKPV 169
           ++++ K+S+++PER+LN S I   ++L+GL  W P+
Sbjct: 3   AKSTAKSSAKLPERVLN-SDIIKKYLLTGLLIWVPL 37


>tr|Q4JFB7|Q4JFB7_CAEEL Protein T02E1.3a, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=gla-3
           PE=2 SV=1
          Length = 646

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 302 IPARHPSPCQKHP*RHPHKSQRGSSTSQKYLPHSSSQ 192
           +P RH  P Q HP  H H+SQ      Q+YL H++ Q
Sbjct: 384 MPGRHRPPHQ-HPIHHHHQSQHQLHQHQQYLHHAAQQ 419


>tr|O02289|O02289_CAEEL Protein T02E1.3b, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=gla-3
           PE=1 SV=4
          Length = 679

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 302 IPARHPSPCQKHP*RHPHKSQRGSSTSQKYLPHSSSQ 192
           +P RH  P Q HP  H H+SQ      Q+YL H++ Q
Sbjct: 417 MPGRHRPPHQ-HPIHHHHQSQHQLHQHQQYLHHAAQQ 452