BP915225 |
Clone id |
YMU001_000069_A04 |
Library |
YMU01 |
Length |
506 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000069_A04. |
Accession |
BP915225 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TAACTGCACAACTGATTCATGCAGTAAGCAGGATTATGTTCATGCAAAGATTGATGTTGA TGGTGGTGGAGGCCCTTAGATAATAGCCGAGCTTTCAAATGCGTGTAACACCAACATTAA TGATGCCGATGATGTTTGTGAAGTGAATCCACAGAACATGTGTGGTGAGGGTGATATGAA TGGCCATTGGCTCTCCTACAATTCAACGGTGTTTGTGAAGAGCTTGTCTGCCAAAGAGAA TTCACAAAAGCTCATTATCAGTGTTGCAGATGAGGAGTAGCGATTTTGATCCTTCGGGAC ACTGGCAACGGCAAAACCTTGCCATGAACGTGAGGAACAGACAACCGCTCTCAAATAGGA ACTAGCTTCTATGCAAAAAGCCATGCTGTGTTTTTCCTACACGTATTTTTTCCTATACAA TACGTATTTGTGTCAAGAGAACCTTGTGATTGGTGTTGTATAGACGCTACCCAATATCGG ATAATATAGTACACATGGGGGATCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8MP30 |
Definition |
sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein DDB0167791 OS=Dictyostelium discoideum |
Align length |
33 |
Score (bit) |
32.3 |
E-value |
1.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915225|Adiantum capillus-veneris mRNA, clone: YMU001_000069_A04. (506 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein DDB... 32 1.3 sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodies... 32 2.2 sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx... 32 2.2 sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 O... 31 2.9 sp|Q559T8|Y0701_DICDI Probable serine/threonine-protein kinase D... 31 3.8 sp|Q63410|OTX1_RAT Homeobox protein OTX1 OS=Rattus norvegicus GN... 31 3.8 sp|P80205|OTX1_MOUSE Homeobox protein OTX1 OS=Mus musculus GN=Ot... 31 3.8 sp|P32242|OTX1_HUMAN Homeobox protein OTX1 OS=Homo sapiens GN=OT... 31 3.8 sp|Q28XY0|FL2D_DROPS Pre-mRNA-splicing regulator female-lethal(2... 31 3.8 sp|Q26307|ANA_DROME Protein anachronism OS=Drosophila melanogast... 31 3.8 sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l... 30 6.5 sp|Q9D6B9|HRCT1_MOUSE Histidine-rich carboxyl terminus protein 1... 30 6.5 sp|Q00939|FOXG1_RAT Forkhead box protein G1 OS=Rattus norvegicus... 30 6.5 sp|Q1A1A4|FOXG1_PIPRU Forkhead box protein G1 OS=Pipistrellus ru... 30 6.5 sp|Q60987|FOXG1_MOUSE Forkhead box protein G1 OS=Mus musculus GN... 30 6.5 sp|P55316|FOXG1_HUMAN Forkhead box protein G1 OS=Homo sapiens GN... 30 6.5 sp|Q1A1A2|FOXG1_EQUBU Forkhead box protein G1 OS=Equus burchelli... 30 6.5 sp|Q1A1A3|FOXG1_EPOGA Forkhead box protein G1 OS=Epomophorus gam... 30 6.5 sp|Q1A1A5|FOXG1_CERPY Forkhead box protein G1 OS=Cercopithecus p... 30 6.5 sp|Q1A1A6|FOXG1_CEBCA Forkhead box protein G1 OS=Cebus capucinus... 30 6.5 sp|O31510|YEEK_BACSU Spore coat protein yeeK OS=Bacillus subtili... 30 8.4 sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 O... 30 8.4 sp|Q54C31|PSIR_DICDI Protein psiR OS=Dictyostelium discoideum GN... 30 8.4 sp|Q1A1A1|FOXG1_CERSI Forkhead box protein G1 OS=Ceratotherium s... 30 8.4
>sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein DDB0167791 OS=Dictyostelium discoideum GN=DDB_G0274557 PE=4 SV=1 Length = 233
Score = 32.3 bits (72), Expect = 1.3 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1
Query: 218 SQTPLNCRRANGHSYHPHHTCSVDSLHKHHRHH 120 + P N N + +HPHH LH HH HH Sbjct: 51 NNNPHNPHNPNNNPHHPHH------LHHHHHHH 77
Score = 29.6 bits (65), Expect = 8.4 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -1
Query: 182 HSYHPHHTCSVDSLHKHHRHH 120 H +HPHH H HH HH Sbjct: 106 HHHHPHHHHHHHHHHHHHHHH 126
>sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 OS=Drosophila melanogaster GN=Pde11 PE=1 SV=4 Length = 1451
Score = 31.6 bits (70), Expect = 2.2 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1
Query: 188 NGHSYHPHHTCSVDSLHKHHRHH 120 N HS+H +H+ S + H HH HH Sbjct: 1326 NNHSHHHNHSHSHNHNHHHHHHH 1348
>sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx1 PE=2 SV=1 Length = 323
Score = 31.6 bits (70), Expect = 2.2 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -1
Query: 173 HPHHTCSVDSLHKHHRHH*CWCYTHL 96 HPHH S S H HH HH + T L Sbjct: 257 HPHHHISQSSGHHHHHHHQAYSGTGL 282
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34 PE=1 SV=3 Length = 3582
Score = 31.2 bits (69), Expect = 2.9 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1
Query: 203 NCRRANGHSYHPHHTCSVDSLHKHHRHH 120 NCR+ G +H HH H HH HH Sbjct: 766 NCRQFIGPQHHHHHHHHHHHHHHHHHHH 793
>sp|Q559T8|Y0701_DICDI Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1 Length = 2102
Score = 30.8 bits (68), Expect = 3.8 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1
Query: 191 ANGHSYHPHHTCSVDSLHKHHRHH 120 +N H+++ HH + ++ H HH HH Sbjct: 323 SNNHNHYNHHNNNHNNSHHHHHHH 346
>sp|Q63410|OTX1_RAT Homeobox protein OTX1 OS=Rattus norvegicus GN=Otx1 PE=2 SV=1 Length = 355
Score = 30.8 bits (68), Expect = 3.8 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Frame = -1
Query: 191 ANGHSYHPH--HTCSVDSLHKHHRHH 120 A H +HPH H S S H HH HH Sbjct: 273 AGHHHHHPHAHHPLSQSSGHHHHHHH 298
>sp|P80205|OTX1_MOUSE Homeobox protein OTX1 OS=Mus musculus GN=Otx1 PE=2 SV=1 Length = 355
Score = 30.8 bits (68), Expect = 3.8 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Frame = -1
Query: 191 ANGHSYHPH--HTCSVDSLHKHHRHH 120 A H +HPH H S S H HH HH Sbjct: 273 AGHHHHHPHAHHPLSQSSGHHHHHHH 298
>sp|P32242|OTX1_HUMAN Homeobox protein OTX1 OS=Homo sapiens GN=OTX1 PE=1 SV=1 Length = 354
Score = 30.8 bits (68), Expect = 3.8 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Frame = -1
Query: 191 ANGHSYHPH--HTCSVDSLHKHHRHH 120 A H +HPH H S S H HH HH Sbjct: 273 AGHHHHHPHAHHPLSQSSGHHHHHHH 298
>sp|Q28XY0|FL2D_DROPS Pre-mRNA-splicing regulator female-lethal(2)D OS=Drosophila pseudoobscura pseudoobscura GN=fl(2)d PE=3 SV=1 Length = 563
Score = 30.8 bits (68), Expect = 3.8 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1
Query: 221 SSQTPLNCRRANGHSYHPHHTCSVDSLHKHHRHH 120 +S TP ++ H +HPHH+ HH+HH Sbjct: 57 ASPTPSGSEESHHHPHHPHHS-------HHHQHH 83
>sp|Q26307|ANA_DROME Protein anachronism OS=Drosophila melanogaster GN=ana PE=1 SV=2 Length = 474
Score = 30.8 bits (68), Expect = 3.8 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1
Query: 197 RRANGHSYHPHHTCSVDSLHKHHRHH 120 R GH +HPHH LH+HH HH Sbjct: 440 RHRTGH-HHPHH-----QLHQHHHHH 459
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8Y4F1 |
Definition |
tr|A8Y4F1|A8Y4F1_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae |
Align length |
41 |
Score (bit) |
35.8 |
E-value |
1.2 |
Report |
|