Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915234|Adiantum capillus-veneris mRNA, clone: YMU001_000069_B03. (436 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A4QJV2|RK33_OLIPU 50S ribosomal protein L33, chloroplastic OS... 32 0.89 sp|A4QLV4|RK33_NASOF 50S ribosomal protein L33, chloroplastic OS... 32 0.89 sp|A4QLL5|RK33_LOBMA 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QKC6|RK33_BARVE 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|P56796|RK33_ARATH 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QK39|RK33_ARAHI 50S ribosomal protein L33, chloroplastic OS... 32 1.2 sp|A4QJM0|RK33_AETGR 50S ribosomal protein L33, chloroplastic OS... 32 1.5 sp|P34203|TOP2_ASFM2 DNA topoisomerase 2 OS=African swine fever ... 31 2.6 sp|B1NWH1|RK33_MANES 50S ribosomal protein L33, chloroplastic OS... 31 2.6 sp|Q0G9J8|RK33_LIRTU 50S ribosomal protein L33, chloroplastic OS... 30 3.4 sp|Q06GX6|RK33_DRIGR 50S ribosomal protein L33, chloroplastic OS... 30 3.4 sp|Q7YJV5|RK33_CALFG 50S ribosomal protein L33, chloroplastic OS... 30 3.4 sp|A4QJD6|RK33_AETCO 50S ribosomal protein L33, chloroplastic OS... 30 3.4 sp|A8SEC4|RK33_CERDE 50S ribosomal protein L33, chloroplastic OS... 30 4.4 sp|Q08747|UAF30_YEAST Upstream activation factor subunit UAF30 O... 30 5.7 sp|P06393|RK33_TOBAC 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q2VEF7|RK33_SOLTU 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q2MI79|RK33_SOLLC 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q2MIG6|RK33_SOLBU 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q33C11|RK33_NICTO 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q3C1K8|RK33_NICSY 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|A6MME3|RK33_CHLSC 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q7FNS6|RK33_ATRBE 50S ribosomal protein L33, chloroplastic OS... 29 7.5 sp|Q8BX94|OSBL2_MOUSE Oxysterol-binding protein-related protein ... 29 7.5 sp|A6MMW5|RK33_ILLOL 50S ribosomal protein L33, chloroplastic OS... 29 9.8 sp|A6H5K3|RK33_CYCTA 50S ribosomal protein L33, chloroplastic OS... 29 9.8
>sp|A4QJV2|RK33_OLIPU 50S ribosomal protein L33, chloroplastic OS=Olimarabidopsis pumila GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.3 bits (72), Expect = 0.89 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESSGISRYITQKNRHN 41
>sp|A4QLV4|RK33_NASOF 50S ribosomal protein L33, chloroplastic OS=Nasturtium officinale GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.3 bits (72), Expect = 0.89 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESSGISRYITQKNRHN 41
>sp|A4QLL5|RK33_LOBMA 50S ribosomal protein L33, chloroplastic OS=Lobularia maritima GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND++ + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDSKKELAGISRYITQKNRHN 41
>sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS=Lepidium virginicum GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
>sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS=Draba nemorosa GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
>sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS=Crucihimalaya wallichii GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
>sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS=Capsella bursa-pastoris GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
>sp|A4QKC6|RK33_BARVE 50S ribosomal protein L33, chloroplastic OS=Barbarea verna GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
>sp|P56796|RK33_ARATH 50S ribosomal protein L33, chloroplastic OS=Arabidopsis thaliana GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKEAAGISRYITQKNRHN 41
>sp|A4QK39|RK33_ARAHI 50S ribosomal protein L33, chloroplastic OS=Arabis hirsuta GN=rpl33 PE=3 SV=1 Length = 66
Score = 32.0 bits (71), Expect = 1.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V I E T+ RND + + RY+ Q+NRHN Sbjct: 4 GKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHN 41
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915234|Adiantum capillus-veneris mRNA, clone: YMU001_000069_B03. (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q15WW6|Q15WW6_PSEA6 Acyltransferase 3 OS=Pseudoalteromonas at... 34 4.1 tr|Q7WYM3|Q7WYM3_BACSH LP1G.08 OS=Bacillus sphaericus PE=4 SV=1 34 4.1 tr|A8NHK9|A8NHK9_BRUMA Erythroblast macrophage protein EMP, puta... 34 4.1 tr|A7BAI3|A7BAI3_9ACTO Putative uncharacterized protein OS=Actin... 33 7.1 tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M... 33 7.1 tr|O50338|O50338_ECOLX TrwdD protein OS=Escherichia coli GN=trwD... 33 9.2 tr|B2G2P1|B2G2P1_PRORE Conjugal transfer protein OS=Providencia ... 33 9.2 tr|A8R759|A8R759_SALDU TrwD protein OS=Salmonella dublin GN=trwD... 33 9.2 tr|A7KZU6|A7KZU6_SALDU TrwD OS=Salmonella dublin GN=trwD PE=4 SV=1 33 9.2 tr|B0ZB58|B0ZB58_HUMLU Carboxyl methyltransferase 4 OS=Humulus l... 33 9.2 tr|A7TRD7|A7TRD7_VANPO Putative uncharacterized protein OS=Vande... 33 9.2
>tr|Q15WW6|Q15WW6_PSEA6 Acyltransferase 3 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_1096 PE=4 SV=1 Length = 614
Score = 33.9 bits (76), Expect = 4.1 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Frame = -2
Query: 345 RFKSEEGHQVELQHLLKEVYDVAAKPETKEANH----RLGLRDFYEQEPCGVYFQKTHEL 178 R K + +L+ KEVY + +P +E N R GL+ F +E + HE Sbjct: 496 RTKEYDVFLAQLKAAAKEVYLILGEPRGEEFNPQAVIRHGLKAFMTEEETRNTYAIHHEA 555
Query: 177 LSMIKEDGTVQIFD 136 LS+ E G ++I D Sbjct: 556 LSLFTELGDIEIID 569
>tr|Q7WYM3|Q7WYM3_BACSH LP1G.08 OS=Bacillus sphaericus PE=4 SV=1 Length = 349
Score = 33.9 bits (76), Expect = 4.1 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%) Frame = -2
Query: 300 LKEVYDVAAKPETKEANHRLGLRDFYEQEPCGVYFQKTHE--LLSMIKEDGTVQ-IFDL* 130 LKEV ++ A P ++ + + + ++ E E +Y QKT + M + T + +F+ Sbjct: 88 LKEVTNLTAIPTAQDVSLKWKMPEYKELEKARIYRQKTDVGLFVRMFRSASTYEPLFETN 147
Query: 129 GN-------KVEVVITKEITTHRRNDNEGKGQ 55 G K + T ++TT NDNE +G+ Sbjct: 148 GTTFKDLTVKADTEYTYKVTTVDTNDNESEGK 179
>tr|A8NHK9|A8NHK9_BRUMA Erythroblast macrophage protein EMP, putative OS=Brugia malayi GN=Bm1_02660 PE=4 SV=1 Length = 440
Score = 33.9 bits (76), Expect = 4.1 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Frame = -2
Query: 357 MFTSRFKSEEGHQVELQHLLKEVYDVAAKPETKEANHRLGLRDFYEQEPCGVYFQKTHEL 178 MF RF+S + + + LKE D+ AK + + RD +E +YF + EL Sbjct: 70 MFNKRFRSSQKTMEKNNYFLKETADLVAKAMKGDGTKPIYKRDI--KEKMDLYFGRFDEL 127
Query: 177 LSMIKE--DGTVQIFDL*GNKVE 115 K+ D +++ DL +V+ Sbjct: 128 FGTFKQITDEEMELIDLLDTRVK 150
>tr|A7BAI3|A7BAI3_9ACTO Putative uncharacterized protein OS=Actinomyces odontolyticus ATCC 17982 GN=ACTODO_00647 PE=4 SV=1 Length = 758
Score = 33.1 bits (74), Expect = 7.1 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -2
Query: 303 LLKEVYDVAAKPETKEANHRLGLRDFYEQEPCGVYF 196 L++ +D+A PE E RLG+ FYE+E G Y+ Sbjct: 666 LIQRFHDIATDPEVCEVVRRLGITHFYEEED-GAYY 700
>tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=Musa acuminata GN=rpl33 PE=3 SV=1 Length = 66
Score = 33.1 bits (74), Expect = 7.1 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2
Query: 129 GNKVEVVITKEITTHRRNDNEGKGQENGRYVHQRNRHN 16 G V V++ E T+ RND + RY+ Q+NRHN Sbjct: 4 GKDVRVIVILECTSCARNDVNKESPGISRYITQKNRHN 41
>tr|O50338|O50338_ECOLX TrwdD protein OS=Escherichia coli GN=trwD PE=4 SV=1 Length = 358
Score = 32.7 bits (73), Expect = 9.2 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -2
Query: 273 KPETKEANHRLGLRDFYEQEPCGVYFQKTHELLSMIKEDGTVQIF 139 KP +EANH L ++DF EP V ELL +K DGT++ F Sbjct: 145 KPSAEEANHYLTVQDFTRLEPFEV------ELLK-LKRDGTIREF 182
>tr|B2G2P1|B2G2P1_PRORE Conjugal transfer protein OS=Providencia rettgeri GN=trwD PE=4 SV=1 Length = 364
Score = 32.7 bits (73), Expect = 9.2 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -2
Query: 273 KPETKEANHRLGLRDFYEQEPCGVYFQKTHELLSMIKEDGTVQIF 139 KP +EANH L ++DF EP V ELL +K DGT++ F Sbjct: 151 KPSAEEANHYLTVQDFTRLEPFEV------ELLK-LKRDGTIREF 188
>tr|A8R759|A8R759_SALDU TrwD protein OS=Salmonella dublin GN=trwD PE=4 SV=1 Length = 358
Score = 32.7 bits (73), Expect = 9.2 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -2
Query: 273 KPETKEANHRLGLRDFYEQEPCGVYFQKTHELLSMIKEDGTVQIF 139 KP +EANH L ++DF EP V ELL +K DGT++ F Sbjct: 145 KPSAEEANHYLTVQDFTRLEPFEV------ELLK-LKRDGTIREF 182
>tr|A7KZU6|A7KZU6_SALDU TrwD OS=Salmonella dublin GN=trwD PE=4 SV=1 Length = 325
Score = 32.7 bits (73), Expect = 9.2 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -2
Query: 273 KPETKEANHRLGLRDFYEQEPCGVYFQKTHELLSMIKEDGTVQIF 139 KP +EANH L ++DF EP V ELL +K DGT++ F Sbjct: 112 KPSAEEANHYLTVQDFTRLEPFEV------ELLK-LKRDGTIREF 149
>tr|B0ZB58|B0ZB58_HUMLU Carboxyl methyltransferase 4 OS=Humulus lupulus GN=CMT4 PE=2 SV=1 Length = 366
Score = 32.7 bits (73), Expect = 9.2 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = -2
Query: 204 VYFQKTHELLSMIKEDGTVQIFDL*GNKVEVVITKEITTHRRNDNEGKGQENGRYV 37 VYF + E+ S+++E+G+ + L N E+ T+H N N K E G+YV Sbjct: 261 VYFANSTEVESVVQEEGSFSVQKL--NSFEMAWDSGFTSHEHNSNNEK-CERGKYV 313
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