BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915236|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_B05.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4 OS=Caenorhabd...    30   9.4  
sp|O28783|IORA_ARCFU Indolepyruvate oxidoreductase subunit iorA ...    30   9.4  
sp|Q59758|DNAA_RICPR Chromosomal replication initiator protein d...    30   9.5  

>sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4
           OS=Caenorhabditis elegans GN=sap-49 PE=3 SV=2
          Length = 388

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 58  PIPISGHKLVTPPPPP 11
           P P SGH ++ PPPPP
Sbjct: 372 PAPPSGHGMIPPPPPP 387


>sp|O28783|IORA_ARCFU Indolepyruvate oxidoreductase subunit iorA
           OS=Archaeoglobus fulgidus GN=iorA PE=3 SV=1
          Length = 623

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 511 ILDDREKVSLGRELFVGIGICTELCQN 431
           ++ D EKVS+ + L VG  +C ++C N
Sbjct: 588 LIFDGEKVSIDQSLCVGCAVCAKICPN 614


>sp|Q59758|DNAA_RICPR Chromosomal replication initiator protein dnaA
           OS=Rickettsia prowazekii GN=dnaA PE=3 SV=1
          Length = 463

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 307 YYSKYNLPKRKVIYFCCSKHV*LAANMLKYNVLILFK 417
           +Y K N P+RKVIY    K +      L+   +ILFK
Sbjct: 183 WYIKQNNPRRKVIYMSAEKFMYQFVKALRNKEVILFK 219

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915236|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_B05.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******