BP915241
Clone id YMU001_000069_B11
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCGAGCGCAGCTGGAGAAGAGAGCAAGTGAGTTTGAGCAAGAGAAGAAAGAAAGGCAGC
GAAAAAAGGCTGTATCCACGAAGCAAGCAGACATGGAACAAAGAAGTCGCCAGTCAAGCG
TTGTAAATACTTTGTTCAAATAGACTCATTGGGATTTGCTCTTTGCCAAGGCGCTGTAGT
ATATAGTGAGGATGAAGTATGTGGAAAGGCACAAGCAAATGCTTGTATGCAGGGTACAAA
TAGTATGCAACACTATGAAGCGGGCTATGAGGCCCAACCGACCGGGCACTTACATACTTG
GTCAAGAGCCTCCTCATTCCTCAATCTCTTTTCAAAAGGGTGGGTAGCATAATACAATCT
TGGTGGATGCATATCATGTACCGAAATTGTGCATAGAACATATGTCGAATGTGCTTTGAT
TGTGGGAGGGAAAGGAGGGACTGG
■■Homology search results ■■ -
sp_hit_id Q4R7D3
Definition sp|Q4R7D3|F154A_MACFA Protein FAM154A OS=Macaca fascicularis
Align length 38
Score (bit) 30.0
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915241|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_B11.
(444 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4R7D3|F154A_MACFA Protein FAM154A OS=Macaca fascicularis GN=... 30 4.6
sp|Q8IYX7|F154A_HUMAN Protein FAM154A OS=Homo sapiens GN=FAM154A... 30 4.6
sp|Q27450|CYP1_BRUMA Peptidyl-prolyl cis-trans isomerase 1 OS=Br... 30 5.9
sp|P31754|PYR5_BOVIN Uridine 5'-monophosphate synthase OS=Bos ta... 29 7.7

>sp|Q4R7D3|F154A_MACFA Protein FAM154A OS=Macaca fascicularis
GN=FAM154A PE=2 SV=2
Length = 474

Score = 30.0 bits (66), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1

Query: 396 LCTISVHDMHPPRLYYATHPFEKRLRNEEALDQVCKCP 283
LC I + D+ ++ Y HP EKR +E + C+ P
Sbjct: 196 LCNIPLEDVTNYKMSYVAHPVEKRFVHEAEKFRPCEIP 233


>sp|Q8IYX7|F154A_HUMAN Protein FAM154A OS=Homo sapiens GN=FAM154A
PE=2 SV=2
Length = 474

Score = 30.0 bits (66), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1

Query: 396 LCTISVHDMHPPRLYYATHPFEKRLRNEEALDQVCKCP 283
LC I + D+ ++ Y HP EKR +E + C+ P
Sbjct: 196 LCNIPLEDVTNYKMSYVAHPVEKRFVHEAEKFRPCEIP 233


>sp|Q27450|CYP1_BRUMA Peptidyl-prolyl cis-trans isomerase 1
OS=Brugia malayi GN=CYP-1 PE=1 SV=1
Length = 843

Score = 29.6 bits (65), Expect = 5.9
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2

Query: 41 REER---KAAKKGCIHEASRHGTKKSPVKRCKYFVQ 139
+EER K+ KK HE SRH T++SP ++FV+
Sbjct: 382 KEERYRGKSEKKENRHERSRHTTRRSPEHVTRHFVK 417


>sp|P31754|PYR5_BOVIN Uridine 5'-monophosphate synthase OS=Bos
taurus GN=UMPS PE=2 SV=1
Length = 480

Score = 29.3 bits (64), Expect = 7.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3

Query: 283 GRLGLIARFIVLHTICTLHTSICL 212
GR L AR I LH++CTL T +C+
Sbjct: 159 GRDNLQARGIRLHSVCTLSTVLCI 182


tr_hit_id Q1GUB1
Definition tr|Q1GUB1|Q1GUB1_SPHAL Cell wall hydrolase, SleB OS=Sphingopyxis alaskensis
Align length 110
Score (bit) 35.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915241|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_B11.
(444 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1GUB1|Q1GUB1_SPHAL Cell wall hydrolase, SleB OS=Sphingopyxis... 35 1.8
tr|Q389P8|Q389P8_9TRYP Putative uncharacterized protein OS=Trypa... 33 7.0
tr|A7HHV2|A7HHV2_ANADF Radical SAM domain protein OS=Anaeromyxob... 33 7.0

>tr|Q1GUB1|Q1GUB1_SPHAL Cell wall hydrolase, SleB OS=Sphingopyxis
alaskensis GN=Sala_1044 PE=4 SV=1
Length = 380

Score = 35.0 bits (79), Expect = 1.8
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Frame = -1

Query: 321 RNEEALDQVCKCPVGWAS*PAS*CCILFVPCIQAFACAFPHTSSSL----YTTAPWQRAN 154
R ++A+ QV + P S C ++F +A C F T Y+ A WQRA
Sbjct: 120 RGQQAVGQVVLNRARHPAFPKSICGVVFQGSERATGCQFTFTCDGALARRYSDAAWQRAR 179

Query: 153 PNESI*TKYLQRLTGDFFVPCLLAS-----WIQPFFAAFLSSLA--QTHL 25
N + L+G + LA+ W++P+++ L +A THL
Sbjct: 180 SNADL------MLSGGTYPAVGLATHYHTDWVRPYWSDSLEKIAIVDTHL 223


>tr|Q389P8|Q389P8_9TRYP Putative uncharacterized protein
OS=Trypanosoma brucei GN=Tb10.406.0060 PE=4 SV=1
Length = 333

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1

Query: 55 GSEKRLYPRSKQTWNKEVASQAL*ILCSNRLIGICSLPRRCSI 183
GS R R+ QTW+ E S + + C L+G + PRRC++
Sbjct: 97 GSRFRRPCRNAQTWDSERVSDYMGVWCDRLLLGEHNNPRRCAL 139


>tr|A7HHV2|A7HHV2_ANADF Radical SAM domain protein
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_4120
PE=3 SV=1
Length = 372

Score = 33.1 bits (74), Expect = 7.0
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = -2

Query: 353 IMLPTLLKRD*GMRRLLTKYVSARSVGPHSPLHSVAYYLYPAYKHLLVPFHILHPHYILQ 174
+++P + D +RR+ ++V RSVGP P H +Y PAYK L PF L
Sbjct: 247 LVIPGVNDSDAELRRI-AEFV--RSVGPEVPWHVSQFY--PAYKMLDRPFTPLETLERAA 301

Query: 173 RLGKEQIPMSLFEQSIYNA*LATSLFHVC 87
R+G+ ++E ++ A ++ H+C
Sbjct: 302 RIGRAAGIRHVYEGNVPGADGESTRCHLC 330