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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915245
Clone id YMU001_000069_C04
Library
Length 475
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGATAGGTGTGCAATCAGTGACGAGGCAAAGCGAAGAATTGTGGATAATGTTGTGGGAG
CACTCTCAGATTTTGTAGAAATAGAGTCGGAGGAGAAAGTCCAGACTGAATGTGTCGGCC
GATCCAGATCTCGGGACTGTCTATTCAGTGATCGTGCCAGTGCGTCGTGTAAAGCCCGAG
TATCAAGCTTATAGTCACAATCTGAGAAATATGAAGTATGGAGAGACAAGAACTCTAAAT
GTGAGATTCGAATATCCAGAGGATTTAGAGTGACTTTCTTGTGACTTTCGGCTGCATGCT
ATTATGAGCCCTGGGTATGTGAATGCTTGTAAATATGTATTCTCAATTAAGCAGATGATA
TTGATGGTGATTTGTGTCTTTGTAATCACCCTCACACACTTTGAGCAATGTATCCACACA
CTTTTTGTATTCATTGACTTTTTATAATTGACTTTGTATGTGGTAACTGCAAGAT
■■Homology search results ■■ -
sp_hit_id Q6GDS9
Definition sp|Q6GDS9|F16PC_STAAR Fructose-1,6-bisphosphatase class 3 OS=Staphylococcus aureus (strain MRSA252)
Align length 103
Score (bit) 30.4
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915245|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C04.
         (475 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6GDS9|F16PC_STAAR Fructose-1,6-bisphosphatase class 3 OS=Sta...    30   4.2  
sp|Q2YW94|F16PC_STAAB Fructose-1,6-bisphosphatase class 3 OS=Sta...    30   4.2  
sp|Q8C561|LMBD2_MOUSE LMBR1 domain-containing protein 2 OS=Mus m...    30   7.2  

>sp|Q6GDS9|F16PC_STAAR Fructose-1,6-bisphosphatase class 3
           OS=Staphylococcus aureus (strain MRSA252) GN=fbp PE=3
           SV=1
          Length = 654

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
 Frame = +1

Query: 178 EYQAYSHNLRN----------------MKYGETRTLNVRFEYPED-LE*LSCDFRLHAIM 306
           EY+A+ H LRN                +   E   L     YPED L+ + CDF+ +  +
Sbjct: 54  EYEAFQHVLRNGSGNVRAKINDIFKDKLSTKELNDLTALVYYPEDKLQLIKCDFQNYGQL 113

Query: 307 SPGYVNACKYVFSIKQMILMVICVFVITLTHFEQCIHTLFVFI 435
           +  Y+   +++       L+  C    T +   + +   +VFI
Sbjct: 114 NVWYITTIEHLIQ-----LIKYCSSKYTRSKLRRALPEQYVFI 151


>sp|Q2YW94|F16PC_STAAB Fructose-1,6-bisphosphatase class 3
           OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
           GN=fbp PE=3 SV=1
          Length = 654

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
 Frame = +1

Query: 178 EYQAYSHNLRN----------------MKYGETRTLNVRFEYPED-LE*LSCDFRLHAIM 306
           EY+A+ H LRN                +   E   L     YPED L+ + CDF+ +  +
Sbjct: 54  EYEAFQHVLRNGSGNVRAKINDIFKDKLSTKELNDLTALVYYPEDKLQLIKCDFQNYGQL 113

Query: 307 SPGYVNACKYVFSIKQMILMVICVFVITLTHFEQCIHTLFVFI 435
           +  Y+   +++       L+  C    T +   + +   +VFI
Sbjct: 114 NVWYITTIEHLIQ-----LIKYCSSKYTRSKLRRALPEQYVFI 151


>sp|Q8C561|LMBD2_MOUSE LMBR1 domain-containing protein 2 OS=Mus
           musculus GN=Lmbrd2 PE=2 SV=1
          Length = 694

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 7/35 (20%)
 Frame = -2

Query: 459 IQSQL*KVNE-------YKKCVDTLLKVCEGDYKD 376
           +  ++ KVNE        +KCVDT+LK C  DY++
Sbjct: 247 VMEEVRKVNESIKYNHPLRKCVDTILKKCPTDYQE 281
tr_hit_id A9S556
Definition tr|A9S556|A9S556_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 67.8
E-value 3.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915245|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C04.
         (475 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S556|A9S556_PHYPA Predicted protein OS=Physcomitrella paten...    68   3e-22
tr|A9P2N0|A9P2N0_PICSI Putative uncharacterized protein OS=Picea...    67   1e-21
tr|Q4W7H3|Q4W7H3_PHYPA Plastid division site determinant MinE OS...    66   2e-21
tr|Q1PSW5|Q1PSW5_PHYPA Chloroplast division site regulator OS=Ph...    65   3e-21
tr|Q9C4Z7|Q9C4Z7_ARATH Putative uncharacterized protein F10D13.2...    59   4e-18
tr|A7R1Z7|A7R1Z7_VITVI Chromosome undetermined scaffold_387, who...    58   5e-17
tr|Q45RS1|Q45RS1_BRANA Plastid division regulator MinE OS=Brassi...    62   8e-17
tr|Q45RR9|Q45RR9_SOYBN Plastid division regulator MinE OS=Glycin...    57   3e-16
tr|A5B1H5|A5B1H5_VITVI Putative uncharacterized protein OS=Vitis...    58   4e-16
tr|A9TTI5|A9TTI5_PHYPA Predicted protein OS=Physcomitrella paten...    57   4e-16
tr|A9PD90|A9PD90_POPTR Putative uncharacterized protein OS=Popul...    58   9e-16
tr|A9PJK3|A9PJK3_POPJC Putative uncharacterized protein OS=Popul...    58   3e-15
tr|A7PN12|A7PN12_VITVI Chromosome chr14 scaffold_21, whole genom...    53   7e-15
tr|B8BPS2|B8BPS2_ORYSI Putative uncharacterized protein OS=Oryza...    53   5e-14
tr|A3CHK0|A3CHK0_ORYSJ Putative uncharacterized protein OS=Oryza...    53   4e-13
tr|Q5J6J5|Q5J6J5_ORYSJ Os12g0498400 protein OS=Oryza sativa subs...    53   4e-13
tr|B4FZ48|B4FZ48_MAIZE Putative uncharacterized protein OS=Zea m...    53   6e-13
tr|Q75T24|Q75T24_MAIZE MinE OS=Zea mays GN=minE PE=2 SV=1              53   6e-13
tr|Q45RS0|Q45RS0_HORVU Plastid division regulator MinE OS=Hordeu...    52   2e-12
tr|Q7XAB9|Q7XAB9_CHLRE MinE OS=Chlamydomonas reinhardtii GN=MinE...    39   5e-05
tr|A8J6D4|A8J6D4_CHLRE Chloroplast division site-determinant Min...    39   5e-05
tr|Q9XFY5|Q9XFY5_CHLPR Putative MINE protein OS=Chlorella protot...    40   0.058
tr|A4S9B7|A4S9B7_OSTLU Predicted protein OS=Ostreococcus lucimar...    36   0.059
tr|Q23427|Q23427_CAEEL Putative uncharacterized protein OS=Caeno...    35   2.4  
tr|B6NLB2|B6NLB2_BRAFL Putative uncharacterized protein OS=Branc...    34   4.2  
tr|Q5AEY7|Q5AEY7_CANAL Putative uncharacterized protein OS=Candi...    34   4.2  
tr|Q5AEK2|Q5AEK2_CANAL Putative uncharacterized protein OS=Candi...    34   4.2  
tr|B6QME0|B6QME0_PENMA Polygalacturonase A, putative OS=Penicill...    33   5.4  
tr|B1KYB9|B1KYB9_CLOBM Glycosyl transferase, group 2 family prot...    33   7.1  
tr|Q2TTC7|Q2TTC7_9FUNG Alpha-tubulin (Fragment) OS=Smittium simu...    33   7.1  

>tr|A9S556|A9S556_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_74724 PE=4 SV=1
          Length = 259

 Score = 67.8 bits (164), Expect(2) = 3e-22
 Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSHNLRNMKY---------GETRTLNVRFEYPE 261
           NVS+DPDLGTVYSV VPVRRV+P+YQ +SH L N +          G  R +++RFEYP+
Sbjct: 168 NVSSDPDLGTVYSVTVPVRRVRPQYQEFSHELVNTELRSFDYEEEEGNFRMVDIRFEYPD 227



 Score = 61.2 bits (147), Expect(2) = 3e-22
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC++SD+AKRRIV N+VGALSDFVEIESE+K+Q
Sbjct: 133 DRCSVSDDAKRRIVTNIVGALSDFVEIESEDKIQ 166


>tr|A9P2N0|A9P2N0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 232

 Score = 67.0 bits (162), Expect(2) = 1e-21
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH---NLRNMKY----GETRTLNVRFEYP 258
           NVSADPDLGTVYSV VPVRRVKPEYQ YS    ++RN++Y    G+    +++ +YP
Sbjct: 169 NVSADPDLGTVYSVTVPVRRVKPEYQEYSEGFGDIRNLQYKDISGQVSAFDIKLDYP 225



 Score = 60.1 bits (144), Expect(2) = 1e-21
 Identities = 26/34 (76%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRCA++D+AKR+IV+N+VGALSDFVEI+SE+KVQ
Sbjct: 134 DRCAVTDDAKRKIVNNIVGALSDFVEIDSEDKVQ 167


>tr|Q4W7H3|Q4W7H3_PHYPA Plastid division site determinant MinE
           OS=Physcomitrella patens GN=PpMinE1 PE=2 SV=1
          Length = 257

 Score = 65.9 bits (159), Expect(2) = 2e-21
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSHNLRNMKY---------GETRTLNVRFEYPE 261
           NVS+DPDLGTVYSV VPVRRV+P+YQ +SH L N +          G  R +++RFE+P+
Sbjct: 170 NVSSDPDLGTVYSVTVPVRRVRPQYQEFSHELVNTELRTFDYEEVEGNFRMVDIRFEHPD 229



 Score = 60.5 bits (145), Expect(2) = 2e-21
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC+++D+AKRRIV N+VGALSDFVEIESE+KVQ
Sbjct: 135 DRCSVNDDAKRRIVTNIVGALSDFVEIESEDKVQ 168


>tr|Q1PSW5|Q1PSW5_PHYPA Chloroplast division site regulator
           OS=Physcomitrella patens GN=MinE PE=2 SV=1
          Length = 257

 Score = 65.1 bits (157), Expect(2) = 3e-21
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 9/59 (15%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSHNLRNMKY---------GETRTLNVRFEYP 258
           NVS+DPDLGTVYSV VPVRRV+P+YQ +SH L N +          G  R +++RFE+P
Sbjct: 170 NVSSDPDLGTVYSVTVPVRRVRPQYQEFSHELVNTELRTFDYEEVEGNFRMVDIRFEHP 228



 Score = 60.5 bits (145), Expect(2) = 3e-21
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC+++D+AKRRIV N+VGALSDFVEIESE+KVQ
Sbjct: 135 DRCSVNDDAKRRIVTNIVGALSDFVEIESEDKVQ 168


>tr|Q9C4Z7|Q9C4Z7_ARATH Putative uncharacterized protein F10D13.22
           (Putative uncharacterized protein At1g69390) (Putative
           uncharacterized protein) (Putative uncharacterized
           protein F23O10.25) (AtMinE protein) OS=Arabidopsis
           thaliana GN=F23O10.25 PE=2 SV=1
          Length = 229

 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC +SDEAKR+IV+N++ ALSDFVEIESEEKVQ
Sbjct: 138 DRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQ 171



 Score = 56.2 bits (134), Expect(2) = 4e-18
 Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH--NLRNMKYGETR--TLNVRFEY 255
           NVS D DLGT+YSV VPVRRVKPEYQ       + N++Y +TR  +++VRF++
Sbjct: 173 NVSTDGDLGTIYSVTVPVRRVKPEYQDVDEAGTITNVEYKDTRDGSVDVRFDF 225


>tr|A7R1Z7|A7R1Z7_VITVI Chromosome undetermined scaffold_387, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00012505001 PE=4 SV=1
          Length = 225

 Score = 57.8 bits (138), Expect(2) = 5e-17
 Identities = 26/34 (76%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRCA+SDEAK++IV+N+V ALSDFVEIES++KVQ
Sbjct: 132 DRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQ 165



 Score = 53.5 bits (127), Expect(2) = 5e-17
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH--NLRNMKYGE----TRTLNVRFEY 255
           +VS DP+LGTVYSV VPVRRVKPEYQA      + N++Y +    + +++VRF++
Sbjct: 167 SVSTDPNLGTVYSVTVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDF 221


>tr|Q45RS1|Q45RS1_BRANA Plastid division regulator MinE OS=Brassica
           napus PE=2 SV=1
          Length = 224

 Score = 61.6 bits (148), Expect(2) = 8e-17
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRCA+SDEAKR+IV+N+V ALSDFVEIESEEKVQ
Sbjct: 133 DRCAVSDEAKRKIVNNIVHALSDFVEIESEEKVQ 166



 Score = 48.9 bits (115), Expect(2) = 8e-17
 Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH--NLRNMKYGET--RTLNVRFEY 255
           NV+ D DLGT+YSV VPVRRVK EYQ      ++ N+ Y +T   +++VRF++
Sbjct: 168 NVATDGDLGTIYSVTVPVRRVKAEYQDVDEVGSISNVDYKDTLDGSVDVRFDF 220


>tr|Q45RR9|Q45RR9_SOYBN Plastid division regulator MinE OS=Glycine
           max PE=2 SV=1
          Length = 232

 Score = 57.4 bits (137), Expect(2) = 3e-16
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC +SDEAKR+IV NVV ALSDFVEIES++KVQ
Sbjct: 136 DRCEVSDEAKRKIVSNVVRALSDFVEIESQDKVQ 169



 Score = 51.2 bits (121), Expect(2) = 3e-16
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 6/55 (10%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH--NLRNMKY---GETR-TLNVRFEY 255
           +VSAD DLGT+YSV VPVRRVKPEYQ       + N++Y   GET  +++V F++
Sbjct: 171 SVSADTDLGTIYSVTVPVRRVKPEYQEMDEFGTITNVEYKDTGETSGSVDVTFDF 225


>tr|A5B1H5|A5B1H5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034714 PE=4 SV=1
          Length = 530

 Score = 57.8 bits (138), Expect(2) = 4e-16
 Identities = 26/34 (76%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRCA+SDEAK++IV+N+V ALSDFVEIES++KVQ
Sbjct: 147 DRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQ 180



 Score = 50.4 bits (119), Expect(2) = 4e-16
 Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSH--NLRNMKY 219
           +VS DP+LGTVYSV VPVRRVKPEYQA      + N++Y
Sbjct: 182 SVSTDPNLGTVYSVTVPVRRVKPEYQAADEMGTIANIEY 220


>tr|A9TTI5|A9TTI5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_198122 PE=4 SV=1
          Length = 193

 Score = 57.4 bits (137), Expect(2) = 4e-16
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   DRCAISDEAKRRIVDNVVGALSDFVEIESEEKVQ 104
           DRC +++EAK++IV N+VGALSDFVEI+SEEKVQ
Sbjct: 93  DRCTVNEEAKKKIVTNIVGALSDFVEIQSEEKVQ 126



 Score = 50.8 bits (120), Expect(2) = 4e-16
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 9/60 (15%)
 Frame = +1

Query: 109 NVSADPDLGTVYSVIVPVRRVKPEYQAYSHNLRNM---------KYGETRTLNVRFEYPE 261
           NV++D DL TV SV VPVRRV+P+YQ +S +L +          K G  R +++RFE P+
Sbjct: 128 NVTSDADLNTVCSVTVPVRRVRPQYQEFSRDLVHSELEAFDCEEKEGSFRMVDIRFERPD 187