BP915248 |
Clone id |
YMU001_000069_C07 |
Library |
YMU01 |
Length |
332 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000069_C07. |
Accession |
BP915248 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGGGAAAGATGAAAAGGACAATGAAGAGAAGAGATGAATAAAAAAGAAGTGGCTGCACAC CAAGAGGAACCTCAGTAGAAGAAGGCGAGGTTTGAAAGGGAAAAACAAACCTACAAAAGA AGCCGCCAAGCTGCAAGTGAGGACCAAGCAAGTTGGGTTCCAGGAGATATAAGAGGATCC CGAACCAGGAATCCTATCAAGAATGAACGAGAAGATCCCAAGGATTCTCTTGAACGCATG TACGAGGAAGGAGAAGCCTTAAAGCTAAAAGAAGCTCAAGAAGCTGAAAGAAAAGCAAAG GAAGATGCTGTGGAGTAGCAGAGACAAGCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93Y39 |
Definition |
sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana |
Align length |
44 |
Score (bit) |
33.1 |
E-value |
0.45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4PRV0 |
Definition |
tr|B4PRV0|B4PRV0_DROYA GE10585 OS=Drosophila yakuba |
Align length |
71 |
Score (bit) |
38.9 |
E-value |
0.13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915248|Adiantum capillus-veneris mRNA, clone: YMU001_000069_C07. (332 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4PRV0|B4PRV0_DROYA GE10585 OS=Drosophila yakuba GN=GE10585 P... 39 0.13 tr|Q05AW2|Q05AW2_XENLA MGC154560 protein OS=Xenopus laevis GN=MG... 38 0.29 tr|Q8GL45|Q8GL45_BORBU Erp42 protein OS=Borrelia burgdorferi GN=... 38 0.29 tr|O08264|O08264_BORBU ErpB2 (ErpB) (Erp51 protein) (ErpO) OS=Bo... 37 0.50 tr|Q44782|Q44782_BORBU ErpB OS=Borrelia burgdorferi GN=erpB PE=4... 37 0.50 tr|Q6PAA6|Q6PAA6_XENLA MGC68481 protein OS=Xenopus laevis GN=MGC... 35 1.9 tr|Q5BL70|Q5BL70_XENTR Cisplatin resistance-associated overexpre... 35 1.9 tr|Q28G85|Q28G85_XENTR Cisplatin resistance-associated overexpre... 35 1.9 tr|Q4RY53|Q4RY53_TETNG Chromosome 3 SCAF14978, whole genome shot... 34 3.2 tr|O87298|O87298_BORBU ElpB1 OS=Borrelia burgdorferi PE=4 SV=1 34 4.2 tr|B2WEM4|B2WEM4_PYRTR Putative uncharacterized protein OS=Pyren... 33 5.5 tr|Q9VB74|Q9VB74_DROME CG6066 OS=Drosophila melanogaster GN=CG60... 33 9.4 tr|B4ID01|B4ID01_DROSE GM16758 (Fragment) OS=Drosophila sechelli... 33 9.4 tr|A0D7R2|A0D7R2_PARTE Chromosome undetermined scaffold_40, whol... 33 9.4 tr|A6RM50|A6RM50_BOTFB Putative uncharacterized protein OS=Botry... 33 9.4
>tr|B4PRV0|B4PRV0_DROYA GE10585 OS=Drosophila yakuba GN=GE10585 PE=4 SV=1 Length = 460
Score = 38.9 bits (89), Expect = 0.13 Identities = 24/71 (33%), Positives = 34/71 (47%) Frame = +1
Query: 25 REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGSRTRNPIKN 204 RE +E H+E + +R REK R++ S S R SR+R+P KN Sbjct: 41 RERERDREREHHRERTSNRGSRRSREKDAVSHRRRSRSSSSRSSSSSSDRSSRSRSPSKN 100
Query: 205 EREDPKDSLER 237 + PK S+ER Sbjct: 101 RKSRPK-SVER 110
>tr|Q05AW2|Q05AW2_XENLA MGC154560 protein OS=Xenopus laevis GN=MGC154560 PE=2 SV=1 Length = 430
Score = 37.7 bits (86), Expect = 0.29 Identities = 29/79 (36%), Positives = 41/79 (51%) Frame = +1
Query: 1 RER*KGQ*REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGS 180 RE+ K Q REE KK +EE + K+ EREK+ +++ S + S D RGS Sbjct: 256 REKEKEQEREEREKKR--RREEEAKEKEKNREREKR-----KRSCSRSRNSSRTSDRRGS 308
Query: 181 RTRNPIKNEREDPKDSLER 237 RTR+ ++ D K S R Sbjct: 309 RTRDHKRSRSRDRKRSRSR 327
>tr|Q8GL45|Q8GL45_BORBU Erp42 protein OS=Borrelia burgdorferi GN=erp42 PE=4 SV=1 Length = 370
Score = 37.7 bits (86), Expect = 0.29 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Frame = +1
Query: 28 EEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQA-SWVPGDIRGSRTRNPIKN 204 EE NK+E+A +EE Q +KA E++K+ ++ R+A +E +A + + + + Sbjct: 144 EERNKQELAKQEEEQQKRKAEKEKQKREEEQERKAKAEKEAKEKAERQKQEEQQKRKAEK 203
Query: 205 EREDPKDSLER 237 ERE+ + E+ Sbjct: 204 EREEQRKEAEK 214
>tr|O08264|O08264_BORBU ErpB2 (ErpB) (Erp51 protein) (ErpO) OS=Borrelia burgdorferi GN=erpB2 PE=4 SV=1 Length = 378
Score = 37.0 bits (84), Expect = 0.50 Identities = 17/40 (42%), Positives = 27/40 (67%) Frame = +1
Query: 28 EEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQ 147 EE NK+E+A +EE Q +KA E++K+ ++ RQ E+Q Sbjct: 143 EERNKQELAKQEEEQQKRKAEQEKQKREEEQERQKREEEQ 182
>tr|Q44782|Q44782_BORBU ErpB OS=Borrelia burgdorferi GN=erpB PE=4 SV=1 Length = 218
Score = 37.0 bits (84), Expect = 0.50 Identities = 17/40 (42%), Positives = 27/40 (67%) Frame = +1
Query: 28 EEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQ 147 EE NK+E+A +EE Q +KA E++K+ ++ RQ E+Q Sbjct: 143 EERNKQELAKQEEEQQKRKAEQEKQKREEEQERQKREEEQ 182
>tr|Q6PAA6|Q6PAA6_XENLA MGC68481 protein OS=Xenopus laevis GN=MGC68481 PE=2 SV=1 Length = 432
Score = 35.0 bits (79), Expect = 1.9 Identities = 29/79 (36%), Positives = 38/79 (48%) Frame = +1
Query: 1 RER*KGQ*REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGS 180 RE+ K REE KK +EE + K+ EREK+ RSR S + D RGS Sbjct: 256 REKEKELEREEREKKR--QREEEAKEKERNREREKRKRSRSRSRNSSRTS-----DRRGS 308
Query: 181 RTRNPIKNEREDPKDSLER 237 R R+ ++ D K S R Sbjct: 309 RPRDHKRSRSRDRKRSRSR 327
>tr|Q5BL70|Q5BL70_XENTR Cisplatin resistance-associated overexpressed protein OS=Xenopus tropicalis GN=crop PE=2 SV=1 Length = 432
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/79 (35%), Positives = 41/79 (51%) Frame = +1
Query: 1 RER*KGQ*REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGS 180 +E+ K + REE KK +EE + K+ EREK+ KRSR + + D RGS Sbjct: 258 KEKEKEKEREEREKKR--RREEEAKEKERNREREKR--KRSRSGSRNSSRT---SDRRGS 310
Query: 181 RTRNPIKNEREDPKDSLER 237 R+R+ ++ D K S R Sbjct: 311 RSRDHKRSRSRDRKRSRSR 329
>tr|Q28G85|Q28G85_XENTR Cisplatin resistance-associated overexpressed protein OS=Xenopus tropicalis GN=TGas054e13.1-001 PE=2 SV=1 Length = 434
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/79 (35%), Positives = 41/79 (51%) Frame = +1
Query: 1 RER*KGQ*REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGS 180 +E+ K + REE KK +EE + K+ EREK+ KRSR + + D RGS Sbjct: 260 KEKEKEKEREEREKKR--RREEEAKEKERNREREKR--KRSRSGSRNSSRT---SDRRGS 312
Query: 181 RTRNPIKNEREDPKDSLER 237 R+R+ ++ D K S R Sbjct: 313 RSRDHKRSRSRDRKRSRSR 331
>tr|Q4RY53|Q4RY53_TETNG Chromosome 3 SCAF14978, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027143001 PE=4 SV=1 Length = 933
Score = 34.3 bits (77), Expect = 3.2 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +1
Query: 1 RER*KGQ*REEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQASWVPGDIRGS 180 RER + + REE ++ +E + ++ R ERE++ + Q E Q W + Sbjct: 574 REREREREREEREREREEREREREERERERKEREREREREREQRERERQREWEERE---- 629
Query: 181 RTRNPIKNEREDPKD 225 R R ++ RED +D Sbjct: 630 RGREERRDRREDSRD 644
>tr|O87298|O87298_BORBU ElpB1 OS=Borrelia burgdorferi PE=4 SV=1 Length = 375
Score = 33.9 bits (76), Expect = 4.2 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +1
Query: 28 EEMNKKEVAAHQEEPQ*KKARFEREKQTYKRSRQAASEDQA-SWVPGDIRGSRTRNPIKN 204 E NK+E+A +EE Q +KA E++K+ + R+A +E +A + + + + Sbjct: 144 EVRNKQELAKQEEEQQKRKAEKEKQKREEVQERKAKAEKEAKEKAERQKQEEQQKRKAEK 203
Query: 205 EREDPKDSLER 237 ERE+ + E+ Sbjct: 204 EREEQRKEAEK 214
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