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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915249
Clone id YMU001_000069_C08
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTACAAGGCAGCGGTGACGGTGGATCCCACCAACGCGTATCATGCGGGGTGCTATGCGCA
CTTTATGTGGAACTCGAGTGCAGGCCAGGCTGAGGAGAACTCATGCTGTTGGATTGCAGA
CAATTTGGGCTCCAACTCTGAGCAGATGCCAAGCTCATGACAAGCCACCTACAAGCAAGT
TGCAATATGATGCCCATGTGATGAAGGCAGCCACCACCCTTTTTCCATCAACCCAAAGTA
GGGCAATGGGAGAAAGCTATAGTGTAAAGTTACAAATATTCAGCCTACTTTTTAACAGGT
TGAGTATAGCAAGAAAACCTTCAGCTATACCCATACTTCTGTCTCTTTGTGAGTATGCAT
GTATACACACTCCCAATTTTCCTTGTACATTAGCCATATTACTGAGGCAGGCACTCTATA
ACATGATGTACAATAGACTTTCATTTCGAGCTCTAATCTCAATCGTTACTTCGTTGCGGA
TTTGGAAAAAAAAAAAAAGAAAAA
■■Homology search results ■■ -
sp_hit_id Q29DY1
Definition sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila pseudoobscura pseudoobscura
Align length 78
Score (bit) 31.2
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915249|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C08.
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila ...    31   2.6  
sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=3         31   3.4  
sp|A3QBN1|CCA_SHELP Multifunctional CCA protein OS=Shewanella lo...    30   4.4  
sp|A1U380|LIPA_MARAV Lipoyl synthase OS=Marinobacter aquaeolei (...    30   7.5  
sp|P57979|UVRA_PASMU UvrABC system protein A OS=Pasteurella mult...    29   9.8  

>sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila
           pseudoobscura pseudoobscura GN=Klp68D PE=3 SV=1
          Length = 797

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
 Frame = -2

Query: 484 QIRNEVTIEIRARNESL-----LYIML*SACLSNMANVQGKLGVCIHAYSQRDRSMGIAE 320
           +++ E T+EIR RN SL     L     S C +    +Q +L  C H ++Q  R + +A+
Sbjct: 509 ELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKHDHNQDLRELEMAQ 568

Query: 319 GFLAILNLLKSRLNICNF 266
             L +  L +  L I NF
Sbjct: 569 NEL-VKELKRQLLIIDNF 585


>sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=3
          Length = 3623

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 276  FVTLHYSFLPLPYFGLMEKGWWLPSSHG 193
            F++ +Y   P+PY+   E  WWL SSHG
Sbjct: 1176 FISPNY---PMPYYHSSECYWWLKSSHG 1200


>sp|A3QBN1|CCA_SHELP Multifunctional CCA protein OS=Shewanella
           loihica (strain ATCC BAA-1088 / PV-4) GN=cca PE=3 SV=1
          Length = 413

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 219 LFPSTQSRAMGESYSVKLQIFSLLFNRLSIARKPSAIPILLSLCEYAC 362
           L  S Q + +  ++ ++ +    LF++  + RKP  +P LL  CE  C
Sbjct: 299 LLVSDQHQNIHNAFELRAETMVKLFDKADLWRKPERLPQLLLACEADC 346


>sp|A1U380|LIPA_MARAV Lipoyl synthase OS=Marinobacter aquaeolei
           (strain ATCC 700491 / DSM 11845 / VT8) GN=lipA PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 251 SHCPTLG*-WKKGGGCLHHMGIILQLACRWLVMSLASAQSW 132
           SHCP +G  W  G   +  MG +   AC++  +   + + W
Sbjct: 76  SHCPNIGECWTNGTATIMVMGSVCTRACKFCAVDTGNPKGW 116


>sp|P57979|UVRA_PASMU UvrABC system protein A OS=Pasteurella
           multocida GN=uvrA PE=3 SV=1
          Length = 943

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +3

Query: 87  RLRRTHAVGLQTIWAPTLSRCQAHDKPPTSKLQYDAHVMKAATTLFPSTQSRAMGESYSV 266
           R + T ++ ++   A  +S C  HD    S+L+ +A  +   TT  P    +++GE+   
Sbjct: 384 RYKETESLSVREELAKNISTCPCHD-CGGSRLRQEARHVYIGTTTLPDVAEKSIGET--- 439

Query: 267 KLQIFSLLF---NRLSIARK 317
            L  FS L     R  IA K
Sbjct: 440 -LHFFSELHLSGQRAQIAEK 458
tr_hit_id B6U0L7
Definition tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 27
Score (bit) 42.4
E-value 0.012
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915249|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C08.
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea m...    42   0.012
tr|A9U3W7|A9U3W7_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.012
tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subs...    41   0.026
tr|B6SSS3|B6SSS3_MAIZE Putative uncharacterized protein OS=Zea m...    41   0.026
tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.026
tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.026
tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.026
tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200 pro...    39   0.097
tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.097
tr|B7FM44|B7FM44_MEDTR Putative uncharacterized protein OS=Medic...    39   0.17 
tr|Q9LNU7|Q9LNU7_ARATH F22G5.38 OS=Arabidopsis thaliana PE=4 SV=1      36   0.82 
tr|Q8VZC8|Q8VZC8_ARATH At1g07280/F22G5_32 OS=Arabidopsis thalian...    36   0.82 
tr|A7NYI9|A7NYI9_VITVI Chromosome chr6 scaffold_3, whole genome ...    36   1.1  
tr|Q9SD65|Q9SD65_ARATH Putative uncharacterized protein F13I12.1...    35   1.8  
tr|Q8GW79|Q8GW79_ARATH Putative uncharacterized protein At2g2967...    35   1.8  
tr|O82388|O82388_ARATH Expressed protein (At2g29670/T27A16.23) (...    35   1.8  
tr|Q28Q45|Q28Q45_JANSC Putative uncharacterized protein OS=Janna...    35   2.4  
tr|A9S3E2|A9S3E2_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.4  
tr|A7Z8A4|A7Z8A4_BACA2 YukJ OS=Bacillus amyloliquefaciens (strai...    34   4.1  
tr|B8LR76|B8LR76_PICSI Putative uncharacterized protein OS=Picea...    34   4.1  
tr|B6GYU9|B6GYU9_PENCH Pc12g05150 protein OS=Penicillium chrysog...    34   4.1  
tr|A9NPS5|A9NPS5_PICSI Putative uncharacterized protein OS=Picea...    33   7.0  
tr|A7RIQ0|A7RIQ0_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  

>tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 499

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSA 82
           Y+ A+  DP NA+HA  YAHF+WN+ A
Sbjct: 460 YQEAIAADPGNAHHAAAYAHFLWNTGA 486


>tr|A9U3W7|A9U3W7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155751 PE=4 SV=1
          Length = 331

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEE 97
           YKAA+  DP ++Y AG YAHF+W++  G   E
Sbjct: 296 YKAAIAADPQSSYPAGSYAHFLWHAGDGDNSE 327


>tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0012G21.7 PE=2 SV=1
          Length = 484

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
           Y+ A+  DP NA+HA  YAHF+WN+      E++C
Sbjct: 450 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 480


>tr|B6SSS3|B6SSS3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 512

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
           Y+ A+  DP NA+HA  YAHF+WN+      E++C
Sbjct: 478 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 508


>tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169439 PE=4 SV=1
          Length = 604

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWN 73
           ++AA  +DPTN YHAG Y+HF+W+
Sbjct: 564 FRAAAALDPTNPYHAGNYSHFLWH 587


>tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168339 PE=4 SV=1
          Length = 604

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSA 82
           ++AA  +DP N YHAG Y+HF+W+S +
Sbjct: 567 FRAAAALDPANPYHAGNYSHFLWHSES 593


>tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20153 PE=4 SV=1
          Length = 484

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
           Y+ A+  DP NA+HA  YAHF+WN+      E++C
Sbjct: 450 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 480


>tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200
           protein) OS=Oryza sativa subsp. japonica GN=B1096A10.34
           PE=4 SV=1
          Length = 512

 Score = 39.3 bits (90), Expect = 0.097
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNS 76
           Y+ A+  +P+N++HA  YAHF+WN+
Sbjct: 478 YQEAIAAEPSNSHHAAAYAHFLWNT 502


>tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04480 PE=4 SV=1
          Length = 759

 Score = 39.3 bits (90), Expect = 0.097
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNS 76
           Y+ A+  +P+N++HA  YAHF+WN+
Sbjct: 725 YQEAIAAEPSNSHHAAAYAHFLWNT 749


>tr|B7FM44|B7FM44_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 286

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = +2

Query: 2   YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSCCWIADN 124
           Y  A++ +P+N Y+A  YAHF+WN+      E++C  ++D+
Sbjct: 246 YLEAISAEPSNTYYAANYAHFLWNTGG----EDTCFPLSDS 282