BP915249
Clone id YMU001_000069_C08
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTACAAGGCAGCGGTGACGGTGGATCCCACCAACGCGTATCATGCGGGGTGCTATGCGCA
CTTTATGTGGAACTCGAGTGCAGGCCAGGCTGAGGAGAACTCATGCTGTTGGATTGCAGA
CAATTTGGGCTCCAACTCTGAGCAGATGCCAAGCTCATGACAAGCCACCTACAAGCAAGT
TGCAATATGATGCCCATGTGATGAAGGCAGCCACCACCCTTTTTCCATCAACCCAAAGTA
GGGCAATGGGAGAAAGCTATAGTGTAAAGTTACAAATATTCAGCCTACTTTTTAACAGGT
TGAGTATAGCAAGAAAACCTTCAGCTATACCCATACTTCTGTCTCTTTGTGAGTATGCAT
GTATACACACTCCCAATTTTCCTTGTACATTAGCCATATTACTGAGGCAGGCACTCTATA
ACATGATGTACAATAGACTTTCATTTCGAGCTCTAATCTCAATCGTTACTTCGTTGCGGA
TTTGGAAAAAAAAAAAAAGAAAAA
■■Homology search results ■■ -
sp_hit_id Q29DY1
Definition sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila pseudoobscura pseudoobscura
Align length 78
Score (bit) 31.2
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915249|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C08.
(485 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila ... 31 2.6
sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=3 31 3.4
sp|A3QBN1|CCA_SHELP Multifunctional CCA protein OS=Shewanella lo... 30 4.4
sp|A1U380|LIPA_MARAV Lipoyl synthase OS=Marinobacter aquaeolei (... 30 7.5
sp|P57979|UVRA_PASMU UvrABC system protein A OS=Pasteurella mult... 29 9.8

>sp|Q29DY1|KLP68_DROPS Kinesin-like protein Klp68D OS=Drosophila
pseudoobscura pseudoobscura GN=Klp68D PE=3 SV=1
Length = 797

Score = 31.2 bits (69), Expect = 2.6
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = -2

Query: 484 QIRNEVTIEIRARNESL-----LYIML*SACLSNMANVQGKLGVCIHAYSQRDRSMGIAE 320
+++ E T+EIR RN SL L S C + +Q +L C H ++Q R + +A+
Sbjct: 509 ELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKHDHNQDLRELEMAQ 568

Query: 319 GFLAILNLLKSRLNICNF 266
L + L + L I NF
Sbjct: 569 NEL-VKELKRQLLIIDNF 585


>sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=3
Length = 3623

Score = 30.8 bits (68), Expect = 3.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3

Query: 276 FVTLHYSFLPLPYFGLMEKGWWLPSSHG 193
F++ +Y P+PY+ E WWL SSHG
Sbjct: 1176 FISPNY---PMPYYHSSECYWWLKSSHG 1200


>sp|A3QBN1|CCA_SHELP Multifunctional CCA protein OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=cca PE=3 SV=1
Length = 413

Score = 30.4 bits (67), Expect = 4.4
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3

Query: 219 LFPSTQSRAMGESYSVKLQIFSLLFNRLSIARKPSAIPILLSLCEYAC 362
L S Q + + ++ ++ + LF++ + RKP +P LL CE C
Sbjct: 299 LLVSDQHQNIHNAFELRAETMVKLFDKADLWRKPERLPQLLLACEADC 346


>sp|A1U380|LIPA_MARAV Lipoyl synthase OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=lipA PE=3 SV=1
Length = 348

Score = 29.6 bits (65), Expect = 7.5
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1

Query: 251 SHCPTLG*-WKKGGGCLHHMGIILQLACRWLVMSLASAQSW 132
SHCP +G W G + MG + AC++ + + + W
Sbjct: 76 SHCPNIGECWTNGTATIMVMGSVCTRACKFCAVDTGNPKGW 116


>sp|P57979|UVRA_PASMU UvrABC system protein A OS=Pasteurella
multocida GN=uvrA PE=3 SV=1
Length = 943

Score = 29.3 bits (64), Expect = 9.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3

Query: 87 RLRRTHAVGLQTIWAPTLSRCQAHDKPPTSKLQYDAHVMKAATTLFPSTQSRAMGESYSV 266
R + T ++ ++ A +S C HD S+L+ +A + TT P +++GE+
Sbjct: 384 RYKETESLSVREELAKNISTCPCHD-CGGSRLRQEARHVYIGTTTLPDVAEKSIGET--- 439

Query: 267 KLQIFSLLF---NRLSIARK 317
L FS L R IA K
Sbjct: 440 -LHFFSELHLSGQRAQIAEK 458


tr_hit_id B6U0L7
Definition tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 27
Score (bit) 42.4
E-value 0.012
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915249|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_C08.
(485 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.012
tr|A9U3W7|A9U3W7_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.012
tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subs... 41 0.026
tr|B6SSS3|B6SSS3_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.026
tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026
tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026
tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026
tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200 pro... 39 0.097
tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.097
tr|B7FM44|B7FM44_MEDTR Putative uncharacterized protein OS=Medic... 39 0.17
tr|Q9LNU7|Q9LNU7_ARATH F22G5.38 OS=Arabidopsis thaliana PE=4 SV=1 36 0.82
tr|Q8VZC8|Q8VZC8_ARATH At1g07280/F22G5_32 OS=Arabidopsis thalian... 36 0.82
tr|A7NYI9|A7NYI9_VITVI Chromosome chr6 scaffold_3, whole genome ... 36 1.1
tr|Q9SD65|Q9SD65_ARATH Putative uncharacterized protein F13I12.1... 35 1.8
tr|Q8GW79|Q8GW79_ARATH Putative uncharacterized protein At2g2967... 35 1.8
tr|O82388|O82388_ARATH Expressed protein (At2g29670/T27A16.23) (... 35 1.8
tr|Q28Q45|Q28Q45_JANSC Putative uncharacterized protein OS=Janna... 35 2.4
tr|A9S3E2|A9S3E2_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.4
tr|A7Z8A4|A7Z8A4_BACA2 YukJ OS=Bacillus amyloliquefaciens (strai... 34 4.1
tr|B8LR76|B8LR76_PICSI Putative uncharacterized protein OS=Picea... 34 4.1
tr|B6GYU9|B6GYU9_PENCH Pc12g05150 protein OS=Penicillium chrysog... 34 4.1
tr|A9NPS5|A9NPS5_PICSI Putative uncharacterized protein OS=Picea... 33 7.0
tr|A7RIQ0|A7RIQ0_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 7.0

>tr|B6U0L7|B6U0L7_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 499

Score = 42.4 bits (98), Expect = 0.012
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSA 82
Y+ A+ DP NA+HA YAHF+WN+ A
Sbjct: 460 YQEAIAADPGNAHHAAAYAHFLWNTGA 486


>tr|A9U3W7|A9U3W7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155751 PE=4 SV=1
Length = 331

Score = 42.4 bits (98), Expect = 0.012
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEE 97
YKAA+ DP ++Y AG YAHF+W++ G E
Sbjct: 296 YKAAIAADPQSSYPAGSYAHFLWHAGDGDNSE 327


>tr|Q688J0|Q688J0_ORYSJ Os05g0447700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0012G21.7 PE=2 SV=1
Length = 484

Score = 41.2 bits (95), Expect = 0.026
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
Y+ A+ DP NA+HA YAHF+WN+ E++C
Sbjct: 450 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 480


>tr|B6SSS3|B6SSS3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 512

Score = 41.2 bits (95), Expect = 0.026
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
Y+ A+ DP NA+HA YAHF+WN+ E++C
Sbjct: 478 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 508


>tr|A9TDI7|A9TDI7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169439 PE=4 SV=1
Length = 604

Score = 41.2 bits (95), Expect = 0.026
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWN 73
++AA +DPTN YHAG Y+HF+W+
Sbjct: 564 FRAAAALDPTNPYHAGNYSHFLWH 587


>tr|A9T6F7|A9T6F7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168339 PE=4 SV=1
Length = 604

Score = 41.2 bits (95), Expect = 0.026
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSA 82
++AA +DP N YHAG Y+HF+W+S +
Sbjct: 567 FRAAAALDPANPYHAGNYSHFLWHSES 593


>tr|A2Y583|A2Y583_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20153 PE=4 SV=1
Length = 484

Score = 41.2 bits (95), Expect = 0.026
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSC 106
Y+ A+ DP NA+HA YAHF+WN+ E++C
Sbjct: 450 YQEAIAADPGNAHHAAAYAHFLWNTGG----EDTC 480


>tr|Q5N7T3|Q5N7T3_ORYSJ Peroxidase-like protein (Os01g0855200
protein) OS=Oryza sativa subsp. japonica GN=B1096A10.34
PE=4 SV=1
Length = 512

Score = 39.3 bits (90), Expect = 0.097
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNS 76
Y+ A+ +P+N++HA YAHF+WN+
Sbjct: 478 YQEAIAAEPSNSHHAAAYAHFLWNT 502


>tr|B8ACG3|B8ACG3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04480 PE=4 SV=1
Length = 759

Score = 39.3 bits (90), Expect = 0.097
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNS 76
Y+ A+ +P+N++HA YAHF+WN+
Sbjct: 725 YQEAIAAEPSNSHHAAAYAHFLWNT 749


>tr|B7FM44|B7FM44_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 286

Score = 38.5 bits (88), Expect = 0.17
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2

Query: 2 YKAAVTVDPTNAYHAGCYAHFMWNSSAGQAEENSCCWIADN 124
Y A++ +P+N Y+A YAHF+WN+ E++C ++D+
Sbjct: 246 YLEAISAEPSNTYYAANYAHFLWNTGG----EDTCFPLSDS 282