BP915253
Clone id YMU001_000069_D01
Library
Length 232
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGAGCCCAGAGCATGAAACGTGTTGATGTTGTAGGGCTATCTTAGATGCTAATGCCTCC
CCACAGGCTGACCATCGTCTGGAGGAGAGCCACAGATCTAGGGTTTACACGAGAGAGCTA
GGGTTTAGAGAGAGAGAGAGAGAGACTGGAATATCTGATTCTATGTCACGTCTATCATCT
GGTACACCTAATAACACACATGGTCTATGTGTGACATGTGGACATGCCAAAC
■■Homology search results ■■ -
sp_hit_id P51826
Definition sp|P51826|AFF3_HUMAN AF4/FMR2 family member 3 OS=Homo sapiens
Align length 42
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915253|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D01.
(232 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P51826|AFF3_HUMAN AF4/FMR2 family member 3 OS=Homo sapiens GN... 30 4.9

>sp|P51826|AFF3_HUMAN AF4/FMR2 family member 3 OS=Homo sapiens
GN=AFF3 PE=1 SV=2
Length = 1226

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1

Query: 67 ADHRLEESHRSRVYTRELGFRERERETGISDSMSRLSSGTPN 192
A+ L +S R R E +RE ++ G DS SRL++ T N
Sbjct: 810 AEKALPKSKRKRKCDNEDDYREIKKSQGEKDSSSRLATSTSN 851


tr_hit_id Q60E72
Definition tr|Q60E72|Q60E72_ORYSJ Putative uncharacterized protein OSJNBa0073E05.4 OS=Oryza sativa subsp. japonica
Align length 61
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915253|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D01.
(232 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q60E72|Q60E72_ORYSJ Putative uncharacterized protein OSJNBa00... 34 3.2

>tr|Q60E72|Q60E72_ORYSJ Putative uncharacterized protein
OSJNBa0073E05.4 OS=Oryza sativa subsp. japonica
GN=OSJNBa0073E05.4 PE=4 SV=1
Length = 398

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1

Query: 1 QSPEHETC*CCRAILDANASPQADHRLEESHRSRVYTRELGFRERERETGISDSMSRLSS 180
+SP H+ C CR + + E +R R R+ G RERERE D+ +
Sbjct: 215 RSPPHDCCLRCRRRRPRRPHEPRERKNERENRERKKRRKQGERERERERDRGDNEASAGE 274

Query: 181 G 183
G
Sbjct: 275 G 275