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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915257
Clone id YMU001_000069_D05
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCAACGGCGCGTCTGAAAAGCGATCTGCTTTTCTTCTGTGAATTTGCCAGCTATGACGA
TCTCATCTCTGCGTTCGCTTGCTCTACACAATGATCTCTCTGCAGAATTCCTTCTCTTGT
TACCATCAATGGCATCCTCACCTTAACACCGGCGTGTATACCCCAAAGTTTTAACAGCAA
TGGGCTGGAAGTACAATGCAGGCTTGCTACTCATTGGTACCGTTGTGCTCATTTGGGTCA
CATCTGCAGAAGTCACCCAGAGCATATTTACAGCCTATAGACATCCTTTTGTTCTCACAT
ACCTAGGAGTCTCCCTTATGGTTATTTACCTACCTGTTGCCGCGGCAAAGGACTGGATAT
ATGTGTGGGTGACTAGAAGATTTTCAACACGACAAAAATTAGCAGATAGTCCTCTAAAAA
TTATCAGCTTAAAGAATTCAGTTGTTCCAGTGTCTCCTTCAAAGGTAAATGGAGTTTCAC
TGAGAGGAACAGAGCTCGATTTACAACATTCCATATTCAT
■■Homology search results ■■ -
sp_hit_id Q03730
Definition sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae
Align length 61
Score (bit) 44.3
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915257|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D05.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein Y...    44   3e-04
sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pong...    43   7e-04
sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus ...    43   7e-04
sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo...    43   7e-04
sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos ...    43   7e-04
sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transpo...    40   0.006
sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Sch...    35   0.15 
sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimuri...    33   0.58 
sp|Q8BZK4|S35F4_MOUSE Solute carrier family 35 member F4 OS=Mus ...    31   2.9  
sp|A4IF30|S35F4_HUMAN Solute carrier family 35 member F4 OS=Homo...    31   3.8  
sp|Q8WUM4|PDC6I_HUMAN Programmed cell death 6-interacting protei...    31   3.8  
sp|Q870V7|PNS1_NEUCR Protein PNS1 OS=Neurospora crassa GN=pns-1 ...    30   4.9  
sp|Q0K2K6|KUP2_RALEH Probable potassium transport system protein...    30   8.4  

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein
           YML018C OS=Saccharomyces cerevisiae GN=YML018C PE=1 SV=1
          Length = 393

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
 Frame = +1

Query: 160 TAMGWKYNAGLLLIGTVVLIWVTSAEVTQSIF--TAYRHPFVLTYLGVSLMVIYL-PVAA 330
           T+   ++  GLL++G V+++WV S+ +   IF   +YR PF +TY   +  + YL P A 
Sbjct: 7   TSFNKRWTLGLLMLGLVIILWVLSSFLINLIFEDDSYRKPFFITYTNTAAFIFYLFPTAK 66

Query: 331 A 333
           A
Sbjct: 67  A 67


>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo
           abelii GN=SLC35F5 PE=2 SV=1
          Length = 523

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 187 GLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYL 318
           G++++  V +IWV S+E+T  +FT Y  PF  T+   S+ V+YL
Sbjct: 72  GIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL 115


>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus
           musculus GN=Slc35f5 PE=2 SV=1
          Length = 524

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 187 GLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYL 318
           G++++  V +IWV S+E+T  +FT Y  PF  T+   S+ V+YL
Sbjct: 72  GIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL 115


>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo
           sapiens GN=SLC35F5 PE=2 SV=1
          Length = 523

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 187 GLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYL 318
           G++++  V +IWV S+E+T  +FT Y  PF  T+   S+ V+YL
Sbjct: 72  GIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL 115


>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos
           taurus GN=SLC35F5 PE=2 SV=1
          Length = 524

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 187 GLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYL 318
           G++++  V +IWV S+E+T  +FT Y  PF  T+   S+ V+YL
Sbjct: 72  GIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL 115


>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport
           protein THI74 OS=Saccharomyces cerevisiae GN=THI74 PE=1
           SV=1
          Length = 370

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 187 GLLLIGTVVLIWVTSAEVTQSIF--TAYRHPFVLTYLGVSLMVIYL 318
           G+LL+  VV+ WV ++ +T  +    AY  PF LTYL +S   +YL
Sbjct: 13  GVLLLAVVVVFWVGASCLTNELLETNAYNKPFFLTYLNISSFALYL 58


>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c
           OS=Schizosaccharomyces pombe GN=SPBC405.03c PE=2 SV=1
          Length = 341

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = +1

Query: 154 VLTAMGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTA--YRHPFVLTYLGVSLMVIYL 318
           VL A+G K+  G++L+  VV +W+ S+ +T S+     +  PF++TY+     V YL
Sbjct: 2   VLQAIG-KHALGVVLLLFVVFLWLISSFLTSSLLDDDNFFSPFLITYINTGTFVFYL 57


>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium
           GN=metH PE=3 SV=3
          Length = 1227

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = +3

Query: 138 ACIPQSFNSNGLEVQ--CRLATHWYRCAHL---GHICRSHPEHIYSL*TSFCSHIPRSLP 302
           A +P +F    L+     +    W     L   G  C + PEHI ++  +    +PR LP
Sbjct: 275 AGLPNAFGEYDLDADTMAKQIREWAEAGFLNIVGGCCGTTPEHIAAMSRAVAGLLPRQLP 334

Query: 303 YGYLPTCCRGKGLD-ICVGD*KIF 371
              +P  CR  GL+ + +GD  +F
Sbjct: 335 --DIPVACRLSGLEPLNIGDDSLF 356


>sp|Q8BZK4|S35F4_MOUSE Solute carrier family 35 member F4 OS=Mus
           musculus GN=Slc35f4 PE=2 SV=1
          Length = 485

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 160 TAMGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPV 324
           T+M  K   GLL+I +V   WV + ++ +  +  +  PF +T+   +  +++ PV
Sbjct: 122 TSMVLKTIWGLLIILSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNIMFFPV 176


>sp|A4IF30|S35F4_HUMAN Solute carrier family 35 member F4 OS=Homo
           sapiens GN=SLC35F4 PE=2 SV=2
          Length = 521

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 160 TAMGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPV 324
           T+M  K   GLL+I +V   WV + ++ +  +  +  PF +T+   +  +++ PV
Sbjct: 158 TSMVLKGIWGLLIILSVSSSWVGTTQIVKITYKNFYCPFFMTWFSTNWNIMFFPV 212
tr_hit_id O49378
Definition tr|O49378|O49378_ARATH Putative uncharacterized protein F10N7.50 (AT4g32140/F10N7_50) (Putative uncharacterized protein AT4g32140) OS=Arabidopsis thaliana
Align length 74
Score (bit) 108.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915257|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D05.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O49378|O49378_ARATH Putative uncharacterized protein F10N7.50...   108   2e-22
tr|A5BA13|A5BA13_VITVI Putative uncharacterized protein OS=Vitis...   101   2e-20
tr|A9REA6|A9REA6_PHYPA Predicted protein OS=Physcomitrella paten...   100   3e-20
tr|A7P669|A7P669_VITVI Chromosome chr4 scaffold_6, whole genome ...   100   7e-20
tr|A9S943|A9S943_PHYPA Predicted protein OS=Physcomitrella paten...    97   3e-19
tr|A7P636|A7P636_VITVI Chromosome chr4 scaffold_6, whole genome ...    96   1e-18
tr|A5BG75|A5BG75_VITVI Putative uncharacterized protein OS=Vitis...    96   1e-18
tr|B6TBR3|B6TBR3_MAIZE Vacuolar membrane protein OS=Zea mays PE=...    87   3e-16
tr|B4FYG0|B4FYG0_MAIZE Putative uncharacterized protein OS=Zea m...    87   3e-16
tr|Q7XQE4|Q7XQE4_ORYSJ Os04g0645600 protein OS=Oryza sativa subs...    84   4e-15
tr|Q25AP5|Q25AP5_ORYSA H0811D08.4 protein OS=Oryza sativa GN=H08...    84   4e-15
tr|B8AV89|B8AV89_ORYSI Putative uncharacterized protein OS=Oryza...    84   4e-15
tr|A3AY06|A3AY06_ORYSJ Putative uncharacterized protein OS=Oryza...    84   4e-15
tr|B7FWS4|B7FWS4_PHATR Predicted protein (Fragment) OS=Phaeodact...    52   2e-05
tr|Q653X2|Q653X2_ORYSJ Os06g0681700 protein OS=Oryza sativa subs...    50   8e-05
tr|A2YG99|A2YG99_ORYSI Putative uncharacterized protein OS=Oryza...    50   8e-05
tr|A9T8H8|A9T8H8_PHYPA Predicted protein OS=Physcomitrella paten...    49   1e-04
tr|Q6FUG6|Q6FUG6_CANGA Similarities with uniprot|Q03730 Saccharo...    49   1e-04
tr|B8LR25|B8LR25_PICSI Putative uncharacterized protein OS=Picea...    48   3e-04
tr|Q6CWV6|Q6CWV6_KLULA KLLA0B01177p OS=Kluyveromyces lactis GN=K...    48   3e-04
tr|A7QAB7|A7QAB7_VITVI Chromosome undetermined scaffold_70, whol...    47   4e-04
tr|A5B1L4|A5B1L4_VITVI Putative uncharacterized protein OS=Vitis...    47   4e-04
tr|Q6C4Y1|Q6C4Y1_YARLI YALI0E22803p OS=Yarrowia lipolytica GN=YA...    47   7e-04
tr|Q869L8|Q869L8_DICDI Similar to Hypothetical ORF; Yml018cp OS=...    46   9e-04
tr|Q553G3|Q553G3_DICDI Putative uncharacterized protein OS=Dicty...    46   9e-04
tr|Q756D6|Q756D6_ASHGO AER331Cp OS=Ashbya gossypii GN=AER331C PE...    46   0.001
tr|Q9SFT8|Q9SFT8_ARATH Putative integral membrane protein (At3g0...    45   0.002
tr|B3LLN4|B3LLN4_YEAS1 Putative uncharacterized protein OS=Sacch...    45   0.002
tr|A6ZM44|A6ZM44_YEAS7 Conserved protein OS=Saccharomyces cerevi...    45   0.002
tr|Q6B2K7|Q6B2K7_YEAST YML018C OS=Saccharomyces cerevisiae GN=YM...    44   0.003

>tr|O49378|O49378_ARATH Putative uncharacterized protein F10N7.50
           (AT4g32140/F10N7_50) (Putative uncharacterized protein
           AT4g32140) OS=Arabidopsis thaliana GN=AT4g32140 PE=2
           SV=1
          Length = 394

 Score =  108 bits (269), Expect = 2e-22
 Identities = 49/74 (66%), Positives = 59/74 (79%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           MGW+Y AGL LIGTVV+IWVTSAEVTQ IFTAY+ PF +TYLG SLM++YLPVA  KDW+
Sbjct: 1   MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query: 346 YVWVTRRFSTRQKL 387
             ++ RR S   K+
Sbjct: 61  CRYLDRRSSKSNKI 74


>tr|A5BA13|A5BA13_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010103 PE=4 SV=1
          Length = 411

 Score =  101 bits (252), Expect = 2e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = +1

Query: 154 VLTAMGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAA 333
           +L+ MGWKY AGL LIGTVV IWV SAE+TQ IF+ Y+ PF LTYLGVSLMV+YLP+A  
Sbjct: 16  LLSMMGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVL 75

Query: 334 KDWI 345
           KDWI
Sbjct: 76  KDWI 79


>tr|A9REA6|A9REA6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112662 PE=4 SV=1
          Length = 397

 Score =  100 bits (250), Expect = 3e-20
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           MGW+Y AGL+LI +VVLIWVTSAEVTQSIF AY+HPFVLTYLG SL+VIYLPV+  KD+I
Sbjct: 1   MGWRYKAGLVLIASVVLIWVTSAEVTQSIFEAYKHPFVLTYLGASLLVIYLPVSYLKDYI 60


>tr|A7P669|A7P669_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032802001
           PE=4 SV=1
          Length = 396

 Score = 99.8 bits (247), Expect = 7e-20
 Identities = 45/60 (75%), Positives = 50/60 (83%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           MGWKY AGL LIGTVV IWV SAE+TQ IF+ Y+ PF LTYLGVSLMV+YLP+A  KDWI
Sbjct: 1   MGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWI 60


>tr|A9S943|A9S943_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_125976 PE=4 SV=1
          Length = 392

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           MGW++ AGL+LI +VVLIWVTSAEVTQSIF AY+HPFVLTYLG SL+VIYLPV+  KD I
Sbjct: 1   MGWRHKAGLVLIASVVLIWVTSAEVTQSIFEAYKHPFVLTYLGASLLVIYLPVSYLKDHI 60


>tr|A7P636|A7P636_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032766001
           PE=4 SV=1
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 55/77 (71%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           M WKY AGL LI  VV+IWVTSAEVTQ IF  Y+ PF +TYLG SLMV+YLP+A  KDW+
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQGIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 346 YVWVTRRFSTRQKLADS 396
              + RR S   K A++
Sbjct: 61  CNSLKRRSSKSGKNAET 77


>tr|A5BG75|A5BG75_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001627 PE=4 SV=1
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 55/77 (71%)
 Frame = +1

Query: 166 MGWKYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           M WKY AGL LI  VV+IWVTSAEVTQ IF  Y+ PF +TYLG SLMV+YLP+A  KDW+
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQDIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 346 YVWVTRRFSTRQKLADS 396
              + RR S   K A++
Sbjct: 61  CNSLKRRSSKSGKNAET 77


>tr|B6TBR3|B6TBR3_MAIZE Vacuolar membrane protein OS=Zea mays PE=2
           SV=1
          Length = 398

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = +1

Query: 175 KYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWIY 348
           KY +GL LI  VVLIWV SAEVTQ IFT YRHPF +TYLG SLMVIYLP++  KD+IY
Sbjct: 6   KYRSGLCLIVAVVLIWVISAEVTQGIFTKYRHPFAVTYLGASLMVIYLPLSFLKDFIY 63


>tr|B4FYG0|B4FYG0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 398

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = +1

Query: 175 KYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWIY 348
           KY +GL LI  VVLIWV SAEVTQ IFT YRHPF +TYLG SLMVIYLP++  KD+IY
Sbjct: 6   KYRSGLCLIVAVVLIWVISAEVTQGIFTKYRHPFAVTYLGASLMVIYLPLSFLKDFIY 63


>tr|Q7XQE4|Q7XQE4_ORYSJ Os04g0645600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0070O11.5 PE=2 SV=2
          Length = 396

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 39/57 (68%), Positives = 47/57 (82%)
 Frame = +1

Query: 175 KYNAGLLLIGTVVLIWVTSAEVTQSIFTAYRHPFVLTYLGVSLMVIYLPVAAAKDWI 345
           KY AGL+LI  VVLIWVTSAEVTQ IFT Y+ PF +TYLG SLM+IY+P++  KD+I
Sbjct: 6   KYRAGLVLIVAVVLIWVTSAEVTQGIFTKYKQPFAITYLGASLMIIYIPLSFLKDFI 62