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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915261
Clone id YMU001_000069_D11
Library
Length 369
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGATCTTTAGTGGTGGTGGTGGTGGCTCATGTGCTGGAGCTGTGTGGGATGGTATCTCCN
GGTGATGGAGAAAGAGAGGTATGTGTGGTCGGCTCCGATGGGTATGGGTGGAATGGTGAA
GGATGTGATAAGGTGTGTAGCCTCCCTGTGTGCCAGAATATAATGCGTGCTGACTAATCA
TTCGAACATAGAATACTTCCTGAAAGGGTTCGTTGGACCTCGACTTGAGAGCCAAGATCG
GTTCTTTGTGATTGATTAAATCTGCAATGAGGTTAGCTTCACTAGACAAAGTATCAACTA
AACCATCACCCTTGTGAACAATCCCATCTTTATCCTGCAGATCATCATGCTCGTGAATAA
TCACATCTT
■■Homology search results ■■ -
sp_hit_id Q5KKN9
Definition sp|Q5KKN9|NPL4_CRYNE Nuclear protein localization protein 4 OS=Cryptococcus neoformans
Align length 36
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915261|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D11.
         (369 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5KKN9|NPL4_CRYNE Nuclear protein localization protein 4 OS=C...    32   1.3  
sp|Q8CJ12|GPR64_MOUSE G-protein coupled receptor 64 OS=Mus muscu...    30   2.9  
sp|O75460|ERN1_HUMAN Serine/threonine-protein kinase/endoribonuc...    30   2.9  
sp|Q9EQY0|ERN1_MOUSE Serine/threonine-protein kinase/endoribonuc...    30   3.7  
sp|Q6L8G5|KR510_HUMAN Keratin-associated protein 5-10 OS=Homo sa...    29   8.3  
sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C OS...    29   8.3  
sp|Q9PM24|MURI_CAMJE Glutamate racemase OS=Campylobacter jejuni ...    29   8.3  
sp|Q3UG20|MLL5_MOUSE Histone-lysine N-methyltransferase MLL5 OS=...    29   8.3  
sp|Q8IZD2|MLL5_HUMAN Histone-lysine N-methyltransferase MLL5 OS=...    29   8.3  

>sp|Q5KKN9|NPL4_CRYNE Nuclear protein localization protein 4
           OS=Cryptococcus neoformans GN=NPL4 PE=3 SV=1
          Length = 693

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -2

Query: 152 HTGRLHTLSHPSPFHPYPSEPTTHTSLSPSPGDTIP 45
           H     T  HP P  P PS P THT   P   +TIP
Sbjct: 93  HPAMQATAPHPQPAQPDPSHPKTHT--DPPMPNTIP 126


>sp|Q8CJ12|GPR64_MOUSE G-protein coupled receptor 64 OS=Mus musculus
           GN=Gpr64 PE=2 SV=1
          Length = 1009

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -2

Query: 137 HTLSH-----PSPFHPYPSEPTTHTSLSPSPGDTI 48
           HTLS      PSP  P PS PT   ++S  PG+T+
Sbjct: 326 HTLSPVQSSIPSPTTPAPSVPTELVTISTPPGETV 360


>sp|O75460|ERN1_HUMAN Serine/threonine-protein
           kinase/endoribonuclease IRE1 OS=Homo sapiens GN=ERN1
           PE=1 SV=2
          Length = 977

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 346 DDLQDK-DGIVHKGDGLVDTLSSEANLIADLINHKEPILALKSRSNEPFQEVFYVRMISQ 170
           DD+  K    V  GDGLV T+ SE+  +  + N+  P++A      E  ++V ++ +  +
Sbjct: 189 DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVAVE 248

Query: 169 HALY 158
              Y
Sbjct: 249 TLRY 252


>sp|Q9EQY0|ERN1_MOUSE Serine/threonine-protein
           kinase/endoribonuclease IRE1 OS=Mus musculus GN=Ern1
           PE=2 SV=1
          Length = 977

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 346 DDLQDK-DGIVHKGDGLVDTLSSEANLIADLINHKEPILALKSRSNEPFQEVFYVRMISQ 170
           DD+  K    V  GDGLV T+ SE+  +  + N+  P++A      E  ++V ++ +  +
Sbjct: 191 DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQGEVLRKVVHINVAVE 250

Query: 169 HALY 158
              Y
Sbjct: 251 TLRY 254


>sp|Q6L8G5|KR510_HUMAN Keratin-associated protein 5-10 OS=Homo
           sapiens GN=KRTAP5-10 PE=2 SV=1
          Length = 202

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +1

Query: 43  CGMVSPGDGEREVCVVGSDGYGWNGEGCDKVCSLPVC 153
           CG    G G    C  G  GYG    GC   C +PVC
Sbjct: 14  CGGCGSGCGG---CGSGCGGYGSGCGGCGSSCCVPVC 47


>sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C
           OS=Saccharomyces cerevisiae GN=YHR217C PE=5 SV=1
          Length = 153

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -2

Query: 137 HTLSH---PSPFHPYPSEPTTHTSLSPSPGDT-IPH 42
           HT  H   P+P HP+P  P  HT+ +P+P  T  PH
Sbjct: 35  HTHPHTPTPTP-HPHPHTPHPHTTPTPTPHHTHTPH 69


>sp|Q9PM24|MURI_CAMJE Glutamate racemase OS=Campylobacter jejuni
           GN=murI PE=1 SV=1
          Length = 250

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 334 DKDGIVHKGDGLVDTLSSEANLIADLINHK 245
           DK  ++H GD +V+ L    N+  DL NHK
Sbjct: 196 DKTKLIHSGDAIVEFLKERENI--DLKNHK 223


>sp|Q3UG20|MLL5_MOUSE Histone-lysine N-methyltransferase MLL5 OS=Mus
            musculus GN=Mll5 PE=2 SV=2
          Length = 1868

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 128  SHPSPFHPYPSEPTTHTSLSPSP 60
            +HP+   PYPS+ T HT+L P P
Sbjct: 1762 AHPA-VPPYPSQATHHTTLGPGP 1783


>sp|Q8IZD2|MLL5_HUMAN Histone-lysine N-methyltransferase MLL5 OS=Homo
            sapiens GN=MLL5 PE=1 SV=1
          Length = 1858

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 128  SHPSPFHPYPSEPTTHTSLSPSP 60
            +HP+   PYPS+ T HT+L P P
Sbjct: 1754 AHPT-VPPYPSQATHHTTLGPGP 1775
tr_hit_id Q2UBV2
Definition tr|Q2UBV2|Q2UBV2_ASPOR Transcription initiation factor TFIIIB OS=Aspergillus oryzae
Align length 46
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915261|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D11.
         (369 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2UBV2|Q2UBV2_ASPOR Transcription initiation factor TFIIIB OS...    33   5.4  
tr|B8N559|B8N559_ASPFL Transcription factor TFIIIB complex subun...    33   5.4  
tr|B4MLG9|B4MLG9_DROWI GK16973 OS=Drosophila willistoni GN=GK169...    29   6.1  
tr|B3M1A6|B3M1A6_DROAN GF17831 OS=Drosophila ananassae GN=GF1783...    33   7.1  
tr|A2QDY3|A2QDY3_ASPNC Contig An02c0270, complete genome OS=Aspe...    33   7.1  
tr|Q74ID5|Q74ID5_LACJO Two-component regulatory system response ...    33   9.3  
tr|Q041W2|Q041W2_LACGA DNA-binding response regulator, OmpR fami...    33   9.3  
tr|Q4Q1L0|Q4Q1L0_LEIMA Putative uncharacterized protein OS=Leish...    33   9.3  
tr|Q0U8V3|Q0U8V3_PHANO Putative uncharacterized protein OS=Phaeo...    33   9.3  

>tr|Q2UBV2|Q2UBV2_ASPOR Transcription initiation factor TFIIIB
           OS=Aspergillus oryzae GN=AO090012000849 PE=4 SV=1
          Length = 734

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
 Frame = -2

Query: 146 GRLHTLSHPSPF---------HPYPSEPTTH--TSLSPSPGDTIPH 42
           GRL +L  P+P           P P++PTTH  TS  P+PG   PH
Sbjct: 2   GRLASLKSPNPAAIRRPQPIGRPQPAKPTTHPKTSTCPNPGCPAPH 47


>tr|B8N559|B8N559_ASPFL Transcription factor TFIIIB complex subunit
           Brf1, putative OS=Aspergillus flavus NRRL3357
           GN=AFLA_020970 PE=4 SV=1
          Length = 1098

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
 Frame = -2

Query: 146 GRLHTLSHPSPF---------HPYPSEPTTH--TSLSPSPGDTIPH 42
           GRL +L  P+P           P P++PTTH  TS  P+PG   PH
Sbjct: 24  GRLASLKSPNPAAIRRPQPIGRPQPAKPTTHPKTSTCPNPGCPAPH 69


>tr|B4MLG9|B4MLG9_DROWI GK16973 OS=Drosophila willistoni GN=GK16973
           PE=4 SV=1
          Length = 2651

 Score = 29.3 bits (64), Expect(2) = 6.1
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -3

Query: 352 EHDDLQDKDGIVHKGDGLVDTLSSEANLIADLINHKEPILALKSRSNEPFQEVFYVRMI 176
           + +D +DKD +   G GL+D L    +++   ++H  P+  L   S+ P Q   +  ++
Sbjct: 682 QSNDKEDKDSLA-SGAGLIDGLPVFQHVLMQFLDHDAPV--LDEHSSSPQQRTEFTNLV 737



 Score = 23.1 bits (48), Expect(2) = 6.1
 Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 20/46 (43%)
 Frame = -2

Query: 161 IFWHTGRLHTL--------------------SHPSPFHPYPSEPTT 84
           +FWH   +HTL                    S  SP  P P  PTT
Sbjct: 748 VFWHNAYMHTLISRGDLLLESTLVNKSSVATSKTSPPPPAPPPPTT 793


>tr|B3M1A6|B3M1A6_DROAN GF17831 OS=Drosophila ananassae GN=GF17831
           PE=4 SV=1
          Length = 646

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 134 TLSHPSPFHPYPSEPTTHTSLSPSPGDTIPH 42
           T   P+  H YP+ PTT TS +P+P  T PH
Sbjct: 331 TYPTPTTPHTYPTYPTTTTSPTPNPYPTPPH 361


>tr|A2QDY3|A2QDY3_ASPNC Contig An02c0270, complete genome
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An02g08700 PE=4 SV=1
          Length = 752

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
 Frame = -2

Query: 146 GRLHTLSHPSPF---------HPYPSEPTTH--TSLSPSPGDTIPH 42
           GRL +L  P+P           P P+ PTTH  TS  P+PG   PH
Sbjct: 23  GRLASLKSPNPTPIRRPQPISRPQPARPTTHPKTSTCPNPGCPAPH 68


>tr|Q74ID5|Q74ID5_LACJO Two-component regulatory system response
           regulator OS=Lactobacillus johnsonii GN=LJ_1631 PE=4
           SV=1
          Length = 242

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 361 IIHEHD-DLQDKDGIVHKGDGLVDTLSSEANLIADLINHKEPILALKSRSNE 209
           ++H +D  ++  + IVH+GD  VD    E NL+  LI +K  ++  +   N+
Sbjct: 135 VVHFNDLTIETANRIVHRGDSTVDLTKREYNLLMTLIENKNNVVTREQLLNK 186


>tr|Q041W2|Q041W2_LACGA DNA-binding response regulator, OmpR family
           (Rec-wHTH domains) OS=Lactobacillus gasseri (strain ATCC
           33323 / DSM 20243) GN=LGAS_1398 PE=4 SV=1
          Length = 246

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 361 IIHEHD-DLQDKDGIVHKGDGLVDTLSSEANLIADLINHKEPILALKSRSNE 209
           ++H +D  ++  + IVH+GD  VD    E NL+  LI +K  ++  +   N+
Sbjct: 139 VVHFNDLTIETANRIVHRGDSTVDLTKREYNLLMTLIENKNNVVTREQLLNK 190


>tr|Q4Q1L0|Q4Q1L0_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LmjF36.2115 PE=4 SV=1
          Length = 659

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
 Frame = -2

Query: 212 RTLSGS------ILCSND*SARIIFWHTGR--LHTLSHPSPFHPYPSEPTTHTSLSP 66
           RT SGS      +  +ND    +   H+ R  L +L+  SP HPY S PT HT ++P
Sbjct: 149 RTCSGSDAGAAEVFAAND---AVHVGHSRRAPLPSLALSSPIHPYVSGPTAHTRVAP 202


>tr|Q0U8V3|Q0U8V3_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_11811 PE=4 SV=2
          Length = 454

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 134 TLSHPSPFHPYPSEPTTHTSLSP 66
           T  HP P HP+P+  TTH  L P
Sbjct: 58  TAMHPPPHHPHPTPRTTHPQLQP 80