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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915262
Clone id YMU001_000069_D12
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTGTTTTTTTTTTTTTTTTTCTTTTCGACCAAACACACTAAATCTTTATCCAATTGTAC
ATTTACCTTCAAAGGCCTTGCTTTTAAATACCCTGCAGAAGATAGGCAACTCAAGATGAT
ACAATGGCACAATTGAAGTCCAAAACATTTAAACTGGCAAAACCTTGATAACATGGGCTG
AAACTTCCTCGGCACACACCCTCCCTTTCTGCCCAAAAACAAACAGCCTAACCAGATCAT
TATTAATCATGGATGGTAAGGAAAGCCGTCTACATTTTGGTACCTGGATCATATAACTCC
ATATAGCTTGCAAGACCTTGCCTTTCAATGTCCAGCCTCCTGTCACGTATGTGTACCTTG
CCCAAGCATAAACGCAGCGAGGAGTGAGTATCATGGTTCCCTCTGACCTGCTCATTGCTA
GCCAAATCAAGTCTCCATGAAAGCTATCCATACATGGCACCCGACAACAAACAGCAATCA
CCCAGAACAAGCATGGATTCACCAAGTCCATCAACTC
■■Homology search results ■■ -
sp_hit_id P07687
Definition sp|P07687|HYEP_RAT Epoxide hydrolase 1 OS=Rattus norvegicus
Align length 70
Score (bit) 32.7
E-value 0.92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915262|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D12.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07687|HYEP_RAT Epoxide hydrolase 1 OS=Rattus norvegicus GN=E...    33   0.92 
sp|Q9D379|HYEP_MOUSE Epoxide hydrolase 1 OS=Mus musculus GN=Ephx...    33   0.92 
sp|P07099|HYEP_HUMAN Epoxide hydrolase 1 OS=Homo sapiens GN=EPHX...    31   3.5  
sp|P04068|HYEP_RABIT Epoxide hydrolase 1 OS=Oryctolagus cuniculu...    30   4.5  

>sp|P07687|HYEP_RAT Epoxide hydrolase 1 OS=Rattus norvegicus
           GN=Ephx1 PE=1 SV=1
          Length = 455

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP  + P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQLPSGRTPKPLLMVHGW---PGSFYEFYKIIPL-LTDPKSHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185


>sp|Q9D379|HYEP_MOUSE Epoxide hydrolase 1 OS=Mus musculus GN=Ephx1
           PE=1 SV=1
          Length = 455

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP  + P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQLPSGRTPKPLLMVHGW---PGSFYEFYKIIPL-LTDPKTHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185


>sp|P07099|HYEP_HUMAN Epoxide hydrolase 1 OS=Homo sapiens GN=EPHX1
           PE=1 SV=1
          Length = 455

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP    P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQLPAGHTPKPLLMVHGW---PGSFYEFYKIIPL-LTDPKNHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185


>sp|P04068|HYEP_RABIT Epoxide hydrolase 1 OS=Oryctolagus cuniculus
           GN=EPHX1 PE=1 SV=2
          Length = 455

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP +P  + P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQVPPGRTPKPLLMVHGW---PGSFFEFYKIIPL-LTDPKSHGLSDE 175

Query: 318 HVC-VPCPSI 344
           H+  V CPSI
Sbjct: 176 HIFEVICPSI 185
tr_hit_id B7ZZ73
Definition tr|B7ZZ73|B7ZZ73_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 80
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915262|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_D12.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7ZZ73|B7ZZ73_MAIZE Putative uncharacterized protein OS=Zea m...    34   3.2  
tr|Q9LZR1|Q9LZR1_ARATH Myb-like protein (MYB transcription facto...    34   4.2  
tr|Q8GY43|Q8GY43_ARATH Myb like protein OS=Arabidopsis thaliana ...    34   4.2  
tr|Q3ZCJ6|Q3ZCJ6_BOVIN Epoxide hydrolase 1, microsomal (Xenobiot...    33   5.5  
tr|Q27087|Q27087_TRITR Tt52 protein (Fragment) OS=Trichuris tric...    33   5.5  
tr|Q6IR67|Q6IR67_XENLA MGC82277 protein OS=Xenopus laevis GN=eph...    33   7.1  
tr|Q8K2W5|Q8K2W5_MOUSE Epoxide hydrolase 1, microsomal OS=Mus mu...    33   9.3  
tr|P97869|P97869_MOUSE Epoxide hydrolase 1, microsomal OS=Mus mu...    33   9.3  

>tr|B7ZZ73|B7ZZ73_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 396

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/80 (22%), Positives = 38/80 (47%)
 Frame = -1

Query: 383 RSEGTMILTPRCVYAWARYTYVTGGWTLKGKVLQAIWSYMIQVPKCRRLSLPSMINNDLV 204
           R+  +   +PRCV    +      G  + G   +  W+  +  P+ R  +LP  + +  +
Sbjct: 28  RAAASRFRSPRCVLGSEQLRVAHEGKRMSGAESRTAWAPKVPAPESRLAALPRELRDSRM 87

Query: 203 RLFVFGQKGRVCAEEVSAHV 144
           ++F  G   R  A+E++A++
Sbjct: 88  KIF-SGTANRPLAQEIAAYL 106


>tr|Q9LZR1|Q9LZR1_ARATH Myb-like protein (MYB transcription factor)
           OS=Arabidopsis thaliana GN=F17C15_200 PE=2 SV=1
          Length = 412

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -1

Query: 452 IAVCCRVPCMDSFHGDLIWL------AMSRSEGTMILTPRCVYAWARYTYVTGGWTLKGK 291
           ++ CC V C+ SFHG+ ++       + S S    +  P C Y W +   +    TL+ K
Sbjct: 75  VSRCCGVDCLLSFHGECLYADLGSTSSSSSSSSEDVSNPFCPYCWLKIVALKSK-TLREK 133

Query: 290 VLQA 279
            ++A
Sbjct: 134 TVEA 137


>tr|Q8GY43|Q8GY43_ARATH Myb like protein OS=Arabidopsis thaliana
           GN=At5g03780/F17C15_200 PE=2 SV=1
          Length = 420

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -1

Query: 452 IAVCCRVPCMDSFHGDLIWL------AMSRSEGTMILTPRCVYAWARYTYVTGGWTLKGK 291
           ++ CC V C+ SFHG+ ++       + S S    +  P C Y W +   +    TL+ K
Sbjct: 83  VSRCCGVDCLLSFHGECLYADLGSTSSSSSSSSEDVSNPFCPYCWLKIVALKSK-TLREK 141

Query: 290 VLQA 279
            ++A
Sbjct: 142 TVEA 145


>tr|Q3ZCJ6|Q3ZCJ6_BOVIN Epoxide hydrolase 1, microsomal (Xenobiotic)
           OS=Bos taurus GN=EPHX1 PE=2 SV=1
          Length = 451

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP  + P  +++ HGW   P +F+    I P+ L D      +  
Sbjct: 120 IEGLDIHFIHVKPPNLPSGQTPKPLLMVHGW---PGSFYEFYKIIPF-LTDPKNHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185


>tr|Q27087|Q27087_TRITR Tt52 protein (Fragment) OS=Trichuris
           trichiura GN=Tt52 PE=2 SV=2
          Length = 475

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -2

Query: 184 RKGGCVPRKFQPM-LSRFCQ--FKCFGLQLCHCIILSCLSSAGYLKARPLKVNVQLDKDL 14
           + G C P     + L+ FCQ  F C G Q C      C+++AGY    P+  N++  K  
Sbjct: 330 KPGSCPPSPVGAVGLASFCQSDFDCMGYQKC------CITTAGYECTHPVDENMRQSKRG 383

Query: 13  VC 8
           +C
Sbjct: 384 IC 385


>tr|Q6IR67|Q6IR67_XENLA MGC82277 protein OS=Xenopus laevis GN=ephx1
           PE=2 SV=1
          Length = 456

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP+ + P  II+ HGW   P +F+    I P      +       
Sbjct: 119 IEGLDIHFVHVKPPHLPEGRTPIPIIMVHGW---PGSFYEFYKIIPLLTDPGSHGLDTEY 175

Query: 318 HVCVPCPSI 344
              V CPSI
Sbjct: 176 IFEVICPSI 184


>tr|Q8K2W5|Q8K2W5_MOUSE Epoxide hydrolase 1, microsomal OS=Mus
           musculus GN=Ephx1 PE=2 SV=1
          Length = 455

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP  + P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQLPSGRTPKPLLMVHGW---PGSFYEFYKIIPL-LTDPKTHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185


>tr|P97869|P97869_MOUSE Epoxide hydrolase 1, microsomal OS=Mus
           musculus GN=Ephx1 PE=2 SV=1
          Length = 455

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 138 LDNMG*NFLGTHPPFLPKNKQPNQIIINHGW*GKPSTFWYLDHITPYSLQDLAFQCPASC 317
           ++ +  +F+   PP LP  + P  +++ HGW   P +F+    I P  L D      +  
Sbjct: 120 IEGLDIHFIHVKPPQLPSGRTPKPLLMVHGW---PGSFYEFYKIIPL-LTDPKTHGLSDE 175

Query: 318 HVC-VPCPSI 344
           HV  V CPSI
Sbjct: 176 HVFEVICPSI 185