| BP915264 |
| Clone id |
YMU001_000069_E02 |
| Library |
YMU01 |
| Length |
534 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000069_E02. |
| Accession |
BP915264 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL2397Contig1 |
| Sequence |
CTCAATTCCTTAAGATGAATAAACGTGGCTTTCACAGAGCTACAAATTGAGAACACAATG
ACAACCATCAGCTGTCATTTCATTACAACTCGGTGAAGGTTGGGTCCAGAACCAAATCCA
GCAGAGGTAAATATGCTGACTTCTTCATAATCCTGCTGATCCTTTCAGCTTTCAAAAGCA
TACAATCATCAATTTCAGGGCCTTTCTCCCCAACGACAAACTCATGCACCTTATTGTTAA
CCTCGACCCAAGTAATCCCACGCTTCTTCTTAGCACCTGCACATTTCCTCATTGCCCGTA
ATTTATCTACTTCCTCCCACATCTCAGCATCAGCATAGATACTGCACATAAGTATGTACC
CAGATGCATCATCTGGGTCCCATTTAGAAACTTGATTGAAACATATTCTCCCAAGATCCA
CATTGTGGTATGTTTTGCAGCTGGTCAGCAATGACGTCCACACAATCATGTCCGATGATG
TTGGCATAGTGGCCAGTATGGCTATGGCCTCCTTCAATTGCCCCACACGACCAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9LNU6 |
| Definition |
sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana |
| Align length |
143 |
| Score (bit) |
108.0 |
| E-value |
1.0e-23 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7NVM6 |
| Definition |
tr|A7NVM6|A7NVM6_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
141 |
| Score (bit) |
114.0 |
| E-value |
3.0e-24 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915264|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_E02.
(534 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7NVM6|A7NVM6_VITVI Chromosome chr18 scaffold_1, whole genome... 114 3e-24
tr|A5BML2|A5BML2_VITVI Putative uncharacterized protein OS=Vitis... 112 1e-23
tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragmen... 110 3e-23
tr|B3U1U2|B3U1U2_ISOEN Pentatricopeptide repeat protein (Fragmen... 109 1e-22
tr|A5B3U0|A5B3U0_VITVI Putative uncharacterized protein OS=Vitis... 108 1e-22
tr|A7PAH3|A7PAH3_VITVI Chromosome chr14 scaffold_9, whole genome... 108 2e-22
tr|Q60EX3|Q60EX3_ORYSJ Os05g0370000 protein OS=Oryza sativa subs... 107 5e-22
tr|A7P7A8|A7P7A8_VITVI Chromosome chr9 scaffold_7, whole genome ... 106 7e-22
tr|A7PM23|A7PM23_VITVI Chromosome chr14 scaffold_21, whole genom... 104 2e-21
tr|Q2QN60|Q2QN60_ORYSJ Pentatricopeptide, putative, expressed OS... 103 6e-21
tr|Q0IMC8|Q0IMC8_ORYSJ Os12g0578000 protein OS=Oryza sativa subs... 103 6e-21
tr|A3CIS7|A3CIS7_ORYSJ Putative uncharacterized protein OS=Oryza... 103 6e-21
tr|A2ZM04|A2ZM04_ORYSI Putative uncharacterized protein OS=Oryza... 103 6e-21
tr|A9TDA2|A9TDA2_PHYPA Predicted protein OS=Physcomitrella paten... 102 9e-21
tr|A7PYM3|A7PYM3_VITVI Chromosome chr12 scaffold_38, whole genom... 102 2e-20
tr|A7QJL0|A7QJL0_VITVI Chromosome chr8 scaffold_106, whole genom... 101 3e-20
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 100 4e-20
tr|A7QMH4|A7QMH4_VITVI Chromosome chr19 scaffold_126, whole geno... 100 4e-20
tr|A7PJL6|A7PJL6_VITVI Chromosome chr12 scaffold_18, whole genom... 100 4e-20
tr|A7PA17|A7PA17_VITVI Chromosome chr14 scaffold_9, whole genome... 100 4e-20
tr|A2Y1K2|A2Y1K2_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20
tr|Q60EM0|Q60EM0_ORYSJ Os05g0455900 protein OS=Oryza sativa subs... 100 5e-20
tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, who... 100 5e-20
tr|A2Y5C6|A2Y5C6_ORYSI Putative uncharacterized protein OS=Oryza... 100 5e-20
tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, wh... 100 8e-20
tr|A7Q4V2|A7Q4V2_VITVI Chromosome chr10 scaffold_50, whole genom... 100 8e-20
tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis... 100 8e-20
tr|A9S537|A9S537_PHYPA Predicted protein OS=Physcomitrella paten... 99 1e-19
tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, who... 99 1e-19
tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subs... 99 1e-19
>tr|A7NVM6|A7NVM6_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015494001
PE=4 SV=1
Length = 758
Score = 114 bits (285), Expect = 3e-24
Identities = 53/141 (37%), Positives = 87/141 (61%)
Frame = -3
Query: 529 RVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYIL 350
R G+L++A A++ MP + D VW +LL+SC+ ++NV LG + ++ + +P + YIL
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594
Query: 349 MCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLLK 170
+ +IYA MW EV+++R M K G +K G +W+EV NKVH + G+K ++ K
Sbjct: 595 LSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEK 654
Query: 169 AERISRIMKKSAYLPLLDLVL 107
+++S MKK Y P ++ VL
Sbjct: 655 LDKLSMEMKKLGYFPEINFVL 675
>tr|A5BML2|A5BML2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008415 PE=4 SV=1
Length = 760
Score = 112 bits (280), Expect = 1e-23
Identities = 52/141 (36%), Positives = 86/141 (60%)
Frame = -3
Query: 529 RVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYIL 350
R G+L++A A++ MP + D VW +LL+SC+ ++NV LG + ++ + +P + YIL
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594
Query: 349 MCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLLK 170
+ +IYA MW EV+++R M K G +K G +W+EV NKVH + G+K ++
Sbjct: 595 LSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEN 654
Query: 169 AERISRIMKKSAYLPLLDLVL 107
+++S MKK Y P ++ VL
Sbjct: 655 LDKLSMEMKKLGYFPEINFVL 675
>tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragment)
OS=Isoetes engelmannii GN=PPR PE=4 SV=1
Length = 155
Score = 110 bits (276), Expect = 3e-23
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Frame = -3
Query: 460 WTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYILMCSIYADAEMWEEVDKLRAMRKC 281
W +LL +C+TY +V+LGR CFNQV DP A Y+LM IY+D+ +WEE K+ +R+
Sbjct: 1 WRTLLAACRTYGHVELGRRCFNQVVPIDPYHAGAYVLMSGIYSDSGLWEEALKIDELRQY 60
Query: 280 AGAKKKRGITWVEVNNKVHEFVVGEKG-PEIDD-CMLLKAERISRIMKKSAYLPLLDLVL 107
A A KK W+EV+ KVHEFVVGEK P+I++ C +LK+ ++ MK++ Y P +L+L
Sbjct: 61 ACAWKKPAKAWIEVDKKVHEFVVGEKSHPQIEEICTMLKS--LNSRMKEAGYTPKHNLIL 118
Query: 106 DPTFTE 89
E
Sbjct: 119 QQMSNE 124
>tr|B3U1U2|B3U1U2_ISOEN Pentatricopeptide repeat protein (Fragment)
OS=Isoetes engelmannii GN=PPR PE=4 SV=1
Length = 155
Score = 109 bits (272), Expect = 1e-22
Identities = 52/124 (41%), Positives = 76/124 (61%)
Frame = -3
Query: 460 WTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYILMCSIYADAEMWEEVDKLRAMRKC 281
WT LL +C+T+ N+++GR CF ++ D +AS Y+LM SIY+D MWE KL R+
Sbjct: 1 WTPLLAACRTFGNLEMGRRCFQRILHMDSYNASAYMLMSSIYSDCNMWEHAKKLEDNRQH 60
Query: 280 AGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLLKAERISRIMKKSAYLPLLDLVLDP 101
G KK TW+EVNN+VHEFV+G++ ++ + +R MK++ Y P +DLVL
Sbjct: 61 LGVWKKPAKTWIEVNNQVHEFVIGDRSHPQNEKIWSLLKRSCNRMKEAGYTPKIDLVLQE 120
Query: 100 TFTE 89
E
Sbjct: 121 VSDE 124
>tr|A5B3U0|A5B3U0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035978 PE=4 SV=1
Length = 814
Score = 108 bits (271), Expect = 1e-22
Identities = 49/143 (34%), Positives = 88/143 (61%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
GR GQ+ +A+ ++ MP +D ++W +LL+ CK + NV++ + + +P+D++ Y+
Sbjct: 663 GRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYV 722
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
L+ +IYA+A MW EV KLR M + G KK+ G +W+E+ ++VH F+VG+K +
Sbjct: 723 LLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYE 782
Query: 172 KAERISRIMKKSAYLPLLDLVLD 104
+ ++ MK Y+P D +L+
Sbjct: 783 NLDVLTDEMKWVGYMPDTDFILN 805
>tr|A7PAH3|A7PAH3_VITVI Chromosome chr14 scaffold_9, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00038113001
PE=4 SV=1
Length = 778
Score = 108 bits (270), Expect = 2e-22
Identities = 49/143 (34%), Positives = 88/143 (61%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
GR GQ+ +A+ ++ MP +D ++W +LL+ CK + NV++ + + +P+D++ Y+
Sbjct: 627 GRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYV 686
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
L+ +IYA+A MW EV KLR M + G KK+ G +W+E+ ++VH F+VG+K +
Sbjct: 687 LLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYE 746
Query: 172 KAERISRIMKKSAYLPLLDLVLD 104
+ ++ MK Y+P D +L+
Sbjct: 747 NLDVLTDEMKWVGYMPDTDFILN 769
>tr|Q60EX3|Q60EX3_ORYSJ Os05g0370000 protein OS=Oryza sativa subsp.
japonica GN=OJ1118_F06.2 PE=4 SV=1
Length = 664
Score = 107 bits (266), Expect = 5e-22
Identities = 49/142 (34%), Positives = 83/142 (58%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
GR G+L +A I+ MP D +W SLL SC+ + NV L + + + +P++A Y+
Sbjct: 440 GRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYV 499
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
L+ +IYA +MW+ V++LR M K G KK++G +W+E+ NKVH + G+ + +
Sbjct: 500 LLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITE 559
Query: 172 KAERISRIMKKSAYLPLLDLVL 107
K + ++ M++ + P D VL
Sbjct: 560 KLKHLTMEMRRLGFAPSTDYVL 581
>tr|A7P7A8|A7P7A8_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034388001
PE=4 SV=1
Length = 487
Score = 106 bits (265), Expect = 7e-22
Identities = 52/136 (38%), Positives = 78/136 (57%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
G G+L EA ++ M D VW +LL SCK + NV+LG I ++ + +PDDA Y+
Sbjct: 263 GHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYV 322
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
++ +IYA A WE V KLR + KK +W+EV NKVH F+ G+ + D +
Sbjct: 323 ILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYS 382
Query: 172 KAERISRIMKKSAYLP 125
+ ER+ +MK++ Y P
Sbjct: 383 ELERVGGLMKEAGYSP 398
>tr|A7PM23|A7PM23_VITVI Chromosome chr14 scaffold_21, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020655001
PE=4 SV=1
Length = 614
Score = 104 bits (260), Expect = 2e-21
Identities = 53/142 (37%), Positives = 82/142 (57%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
GR GQL EA+ ++ MP D +W SLL +C+ ++N+DL + + DP A ++
Sbjct: 390 GRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHV 449
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
L+ +IYA W EV+K+R M GA K +G + VE +N+VH+F VG++ + +
Sbjct: 450 LLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYA 509
Query: 172 KAERISRIMKKSAYLPLLDLVL 107
K E ++ MK Y+PL D VL
Sbjct: 510 KLEELAAPMKHLGYVPLTDFVL 531
>tr|Q2QN60|Q2QN60_ORYSJ Pentatricopeptide, putative, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os12g38880 PE=4
SV=2
Length = 491
Score = 103 bits (257), Expect = 6e-21
Identities = 47/136 (34%), Positives = 81/136 (59%)
Frame = -3
Query: 532 GRVGQLKEAIAILATMPTSSDMIVWTSLLTSCKTYHNVDLGRICFNQVSKWDPDDASGYI 353
GR G +KEA+ ++ +MP + ++W SLL++C+ + NV+ I N++SK P +A Y
Sbjct: 348 GRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYA 407
Query: 352 LMCSIYADAEMWEEVDKLRAMRKCAGAKKKRGITWVEVNNKVHEFVVGEKGPEIDDCMLL 173
++ +IYA+A W ++ K R K G++K G +WVE+N HEF VG++ + D +
Sbjct: 408 VLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISE 467
Query: 172 KAERISRIMKKSAYLP 125
+R+S +K +P
Sbjct: 468 MVDRLSSHVKHVGCVP 483
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